RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 GLI3P10071 1580 aa23.55■■□□□ 1.36
PTN-201ENST00000348225 ITGB4P16144 1822 aa23.54■■□□□ 1.36
PTN-201ENST00000348225 DDX21Q9NR30 783 aaKnown RBP eCLIP23.54■■□□□ 1.36
PTN-201ENST00000348225 MEX3CQ5U5Q3 659 aaKnown RBP23.53■■□□□ 1.36
PTN-201ENST00000348225 KCPQ6ZWJ8 1503 aa23.53■■□□□ 1.36
PTN-201ENST00000348225 FBXO41Q8TF61 875 aa23.51■■□□□ 1.35
PTN-201ENST00000348225 USP21Q9UK80 565 aa23.51■■□□□ 1.35
PTN-201ENST00000348225 DOT1LQ8TEK3 1739 aa23.5■■□□□ 1.35
PTN-201ENST00000348225 ANXA1P04083 346 aa23.49■■□□□ 1.35
PTN-201ENST00000348225 DDX58O95786 925 aaKnown RBP23.48■■□□□ 1.35
PTN-201ENST00000348225 ERBB4Q15303 1308 aa23.48■■□□□ 1.35
PTN-201ENST00000348225 BCL9O00512 1426 aa23.48■■□□□ 1.35
PTN-201ENST00000348225 PROSER3Q2NL68 480 aa23.48■■□□□ 1.35
PTN-201ENST00000348225 DNAAF4Q8WXU2 420 aa23.48■■□□□ 1.35
PTN-201ENST00000348225 PIGBQ92521 554 aa23.48■■□□□ 1.35
PTN-201ENST00000348225 C1orf115Q9H7X2 142 aa23.48■■□□□ 1.35
PTN-201ENST00000348225 PDIA6Q15084 440 aa23.47■■□□□ 1.35
PTN-201ENST00000348225 USP16Q9Y5T5 823 aa23.47■■□□□ 1.35
PTN-201ENST00000348225 ATP10DQ9P241 1426 aa23.46■■□□□ 1.35
PTN-201ENST00000348225 PI4KAP2A4QPH2 592 aa23.46■■□□□ 1.35
PTN-201ENST00000348225 PI4KAP1Q8N8J0 262 aa23.46■■□□□ 1.35
PTN-201ENST00000348225 MEIS3Q99687 375 aa23.46■■□□□ 1.35
PTN-201ENST00000348225 GNAI3P08754 354 aa23.45■■□□□ 1.34
PTN-201ENST00000348225 FAM98CQ17RN3 349 aaKnown RBP23.45■■□□□ 1.34
PTN-201ENST00000348225 SRCIN1Q9C0H9 1055 aa23.45■■□□□ 1.34
PTN-201ENST00000348225 ADCY9O60503 1353 aa23.45■■□□□ 1.34
PTN-201ENST00000348225 PTCD1O75127 700 aaKnown RBP23.44■■□□□ 1.34
PTN-201ENST00000348225 KSR2Q6VAB6 950 aa23.44■■□□□ 1.34
PTN-201ENST00000348225 TSHZ2Q9NRE2 1034 aa23.44■■□□□ 1.34
PTN-201ENST00000348225 VSIG10Q8N0Z9 540 aa23.44■■□□□ 1.34
PTN-201ENST00000348225 MYL6BP14649 208 aa23.43■■□□□ 1.34
PTN-201ENST00000348225 RPAP2Q8IXW5 612 aaPredicted RBP23.43■■□□□ 1.34
PTN-201ENST00000348225 MARCH10Q8NA82 808 aaPredicted RBP23.43■■□□□ 1.34
PTN-201ENST00000348225 TEX13AQ9BXU3 409 aaPredicted RBP23.43■■□□□ 1.34
PTN-201ENST00000348225 ATG3Q9NT62 314 aa23.43■■□□□ 1.34
PTN-201ENST00000348225 SMC5Q8IY18 1101 aa23.42■■□□□ 1.34
PTN-201ENST00000348225 SYTL4Q96C24 671 aaPredicted RBP23.42■■□□□ 1.34
PTN-201ENST00000348225 ASAP1Q9ULH1 1129 aa23.42■■□□□ 1.34
PTN-201ENST00000348225 GNAI2P04899 355 aa23.41■■□□□ 1.34
PTN-201ENST00000348225 MAP3K2Q9Y2U5 619 aa23.41■■□□□ 1.34
PTN-201ENST00000348225 KAT6BQ8WYB5 2073 aa23.41■■□□□ 1.34
PTN-201ENST00000348225 AFF2P51816 1311 aa23.41■■□□□ 1.34
PTN-201ENST00000348225 PRIM1P49642 420 aaKnown RBP23.41■■□□□ 1.34
PTN-201ENST00000348225 BEND3Q5T5X7 828 aa23.41■■□□□ 1.34
PTN-201ENST00000348225 ILDR1Q86SU0 546 aaPredicted RBP23.41■■□□□ 1.34
PTN-201ENST00000348225 ANKRD44Q8N8A2 993 aa23.41■■□□□ 1.34
PTN-201ENST00000348225 GCC1Q96CN9 775 aa23.41■■□□□ 1.34
PTN-201ENST00000348225 THSD7AQ9UPZ6 1657 aa23.4■■□□□ 1.34
PTN-201ENST00000348225 AIMP1Q12904 312 aaKnown RBP23.4■■□□□ 1.34
PTN-201ENST00000348225 XAGE3Q8WTP9 111 aa23.4■■□□□ 1.34
PTN-201ENST00000348225 PDZRN3Q9UPQ7 1066 aa23.4■■□□□ 1.34
PTN-201ENST00000348225 CEP85Q6P2H3 762 aa23.39■■□□□ 1.33
PTN-201ENST00000348225 SKAP1Q86WV1 359 aa23.39■■□□□ 1.33
PTN-201ENST00000348225 ALDH1L1O75891 902 aa23.38■■□□□ 1.33
PTN-201ENST00000348225 COPS6Q7L5N1 327 aa23.38■■□□□ 1.33
PTN-201ENST00000348225 LRP10Q7Z4F1 713 aa23.38■■□□□ 1.33
PTN-201ENST00000348225 RIC3Q7Z5B4 369 aa23.38■■□□□ 1.33
PTN-201ENST00000348225 SIRT2Q8IXJ6 389 aa23.38■■□□□ 1.33
PTN-201ENST00000348225 A0A0G2JS52 829 aa23.37■■□□□ 1.33
PTN-201ENST00000348225 UBTFL1P0CB47 393 aaPredicted RBP23.37■■□□□ 1.33
PTN-201ENST00000348225 RGS3P49796 1198 aa23.37■■□□□ 1.33
PTN-201ENST00000348225 MYT1Q01538 1121 aa23.37■■□□□ 1.33
PTN-201ENST00000348225 RBM42Q9BTD8 480 aaKnown RBP23.37■■□□□ 1.33
PTN-201ENST00000348225 HMMRO75330 724 aa23.37■■□□□ 1.33
PTN-201ENST00000348225 USP44Q9H0E7 712 aa23.37■■□□□ 1.33
PTN-201ENST00000348225 TRPC5Q9UL62 973 aaPredicted RBP23.37■■□□□ 1.33
PTN-201ENST00000348225 ATRNO75882 1429 aa23.36■■□□□ 1.33
PTN-201ENST00000348225 LINS1Q8NG48 757 aa23.36■■□□□ 1.33
PTN-201ENST00000348225 GJD4Q96KN9 370 aaPredicted RBP23.36■■□□□ 1.33
PTN-201ENST00000348225 STARD3NLO95772 234 aa23.35■■□□□ 1.33
PTN-201ENST00000348225 NEXNQ0ZGT2 675 aa23.35■■□□□ 1.33
PTN-201ENST00000348225 IBTKQ9P2D0 1353 aaPredicted RBP23.35■■□□□ 1.33
PTN-201ENST00000348225 ANKRD13DQ6ZTN6 518 aa23.34■■□□□ 1.33
PTN-201ENST00000348225 ACSBG1Q96GR2 724 aa23.34■■□□□ 1.33
PTN-201ENST00000348225 ARFGEF2Q9Y6D5 1785 aa23.34■■□□□ 1.33
PTN-201ENST00000348225 NBPF26B4DH59 902 aa23.33■■□□□ 1.33
PTN-201ENST00000348225 PIP4K2AP48426 406 aaPredicted RBP23.33■■□□□ 1.33
PTN-201ENST00000348225 NBPF14Q5TI25 921 aa23.33■■□□□ 1.33
PTN-201ENST00000348225 NBPF10Q6P3W6 841 aaKnown RBP23.33■■□□□ 1.33
PTN-201ENST00000348225 NBPF15Q8N660 670 aa23.33■■□□□ 1.33
PTN-201ENST00000348225 HDAC5Q9UQL6 1122 aa23.33■■□□□ 1.33
PTN-201ENST00000348225 A1BGP04217 495 aa23.33■■□□□ 1.32
PTN-201ENST00000348225 NUCB1Q02818 461 aa23.33■■□□□ 1.32
PTN-201ENST00000348225 DNAJC10Q8IXB1 793 aa23.33■■□□□ 1.32
PTN-201ENST00000348225 PLBD2Q8NHP8 589 aa23.32■■□□□ 1.32
PTN-201ENST00000348225 METTL22Q9BUU2 404 aaPredicted RBP23.32■■□□□ 1.32
PTN-201ENST00000348225 DCTPP1Q9H773 170 aa23.31■■□□□ 1.32
PTN-201ENST00000348225 LRRFIP2Q9Y608 721 aaKnown RBP23.31■■□□□ 1.32
PTN-201ENST00000348225 TJP1Q07157 1748 aa23.31■■□□□ 1.32
PTN-201ENST00000348225 C9orf78Q9NZ63 289 aaPredicted RBP23.3■■□□□ 1.32
PTN-201ENST00000348225 SMARCC1Q92922 1105 aaPredicted RBP23.3■■□□□ 1.32
PTN-201ENST00000348225 NUP188Q5SRE5 1749 aa23.29■■□□□ 1.32
PTN-201ENST00000348225 CICQ96RK0 1608 aaPredicted RBP23.29■■□□□ 1.32
PTN-201ENST00000348225 ATP8B2P98198 1209 aa23.29■■□□□ 1.32
PTN-201ENST00000348225 CHD1LQ86WJ1 897 aa23.29■■□□□ 1.32
PTN-201ENST00000348225 MYD88Q99836 296 aa23.29■■□□□ 1.32
PTN-201ENST00000348225 CWF19L2Q2TBE0 894 aaKnown RBP23.28■■□□□ 1.32
PTN-201ENST00000348225 ANKRD45Q5TZF3 282 aa23.28■■□□□ 1.32
PTN-201ENST00000348225 AFDNP55196 1824 aaKnown RBP23.27■■□□□ 1.32
PTN-201ENST00000348225 ONECUT3O60422 494 aaPredicted RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms