RNA–Protein interactions for RNA: ENST00000345330.8

NPTN-201, Transcript of neuroplastin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPTN, Length 2,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-201ENST00000345330 PIP4K2AP48426 406 aaPredicted RBP17.11■□□□□ 0.33
NPTN-201ENST00000345330 CWF19L2Q2TBE0 894 aaKnown RBP17.11■□□□□ 0.33
NPTN-201ENST00000345330 PPP1R42Q7Z4L9 355 aa17.11■□□□□ 0.33
NPTN-201ENST00000345330 ZNF496Q96IT1 587 aaPredicted RBP17.11■□□□□ 0.33
NPTN-201ENST00000345330 IBTKQ9P2D0 1353 aaPredicted RBP17.11■□□□□ 0.33
NPTN-201ENST00000345330 PDE1AP54750 535 aa17.1■□□□□ 0.33
NPTN-201ENST00000345330 RTL5Q5HYW3 569 aaPredicted RBP17.1■□□□□ 0.33
NPTN-201ENST00000345330 IFNL2Q8IZJ0 200 aa17.1■□□□□ 0.33
NPTN-201ENST00000345330 RBM42Q9BTD8 480 aaKnown RBP17.1■□□□□ 0.33
NPTN-201ENST00000345330 PRDM11Q9NQV5 511 aa17.1■□□□□ 0.33
NPTN-201ENST00000345330 FRAT2O75474 233 aaPredicted RBP17.1■□□□□ 0.33
NPTN-201ENST00000345330 AIMP1Q12904 312 aaKnown RBP17.1■□□□□ 0.33
NPTN-201ENST00000345330 CD2BP2O95400 341 aaKnown RBP17.09■□□□□ 0.33
NPTN-201ENST00000345330 SSH3Q8TE77 659 aa17.09■□□□□ 0.33
NPTN-201ENST00000345330 LRRCC1Q9C099 1032 aa17.09■□□□□ 0.33
NPTN-201ENST00000345330 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.09■□□□□ 0.334e-8■■■■■ 31
NPTN-201ENST00000345330 PKD1L3Q7Z443 1732 aa17.09■□□□□ 0.33
NPTN-201ENST00000345330 IL1RAPL2Q9NP60 686 aa17.08■□□□□ 0.33
NPTN-201ENST00000345330 MYL6BP14649 208 aa17.08■□□□□ 0.32
NPTN-201ENST00000345330 DEKP35659 375 aaKnown RBP17.08■□□□□ 0.32
NPTN-201ENST00000345330 POLA2Q14181 598 aa17.08■□□□□ 0.32
NPTN-201ENST00000345330 USP16Q9Y5T5 823 aa17.08■□□□□ 0.32
NPTN-201ENST00000345330 ABCC6O95255 1503 aa17.07■□□□□ 0.32
NPTN-201ENST00000345330 KSR2Q6VAB6 950 aa17.07■□□□□ 0.32
NPTN-201ENST00000345330 DCAF5Q96JK2 942 aa17.07■□□□□ 0.32
NPTN-201ENST00000345330 OSBPL3Q9H4L5 887 aa17.07■□□□□ 0.32
NPTN-201ENST00000345330 SRGAP3O43295 1099 aa17.06■□□□□ 0.32
NPTN-201ENST00000345330 TOM1L2Q6ZVM7 507 aa17.06■□□□□ 0.32
NPTN-201ENST00000345330 DDX21Q9NR30 783 aaKnown RBP eCLIP17.06■□□□□ 0.32
NPTN-201ENST00000345330 COL5A2P05997 1499 aaPredicted RBP17.06■□□□□ 0.32
NPTN-201ENST00000345330 WDR17Q8IZU2 1322 aa17.06■□□□□ 0.32
NPTN-201ENST00000345330 MRC1P22897 1456 aa17.06■□□□□ 0.32
NPTN-201ENST00000345330 ABCA3Q99758 1704 aa17.06■□□□□ 0.32
NPTN-201ENST00000345330 LRP10Q7Z4F1 713 aa17.05■□□□□ 0.32
NPTN-201ENST00000345330 SURF6O75683 361 aaKnown RBP17.05■□□□□ 0.32
NPTN-201ENST00000345330 UNC5CLQ8IV45 518 aa17.05■□□□□ 0.32
NPTN-201ENST00000345330 STRN4Q9NRL3 753 aa17.05■□□□□ 0.32
NPTN-201ENST00000345330 HYPKQ9NX55 129 aa17.05■□□□□ 0.32
NPTN-201ENST00000345330 GLI3P10071 1580 aa17.04■□□□□ 0.32
NPTN-201ENST00000345330 MX1P20591 662 aa17.04■□□□□ 0.32
NPTN-201ENST00000345330 LARP1Q6PKG0 1096 aaKnown RBP17.04■□□□□ 0.32
NPTN-201ENST00000345330 NUTM1Q86Y26 1132 aa17.04■□□□□ 0.32
NPTN-201ENST00000345330 TUBGCP6Q96RT7 1819 aa17.04■□□□□ 0.32
NPTN-201ENST00000345330 IGKV5-2P06315 115 aa17.04■□□□□ 0.32
NPTN-201ENST00000345330 KAZALD1Q96I82 304 aa17.04■□□□□ 0.32
NPTN-201ENST00000345330 XAGE3Q8WTP9 111 aa17.03■□□□□ 0.32
NPTN-201ENST00000345330 USP26Q9BXU7 913 aa17.03■□□□□ 0.32
NPTN-201ENST00000345330 USP35Q9P2H5 1018 aa17.03■□□□□ 0.32
NPTN-201ENST00000345330 CABP4P57796 275 aa17.02■□□□□ 0.32
NPTN-201ENST00000345330 COPS6Q7L5N1 327 aa17.02■□□□□ 0.32
NPTN-201ENST00000345330 PA2G4Q9UQ80 394 aaKnown RBP17.02■□□□□ 0.32
NPTN-201ENST00000345330 RHPN1Q8TCX5 695 aa17.01■□□□□ 0.31
NPTN-201ENST00000345330 SUCLG2Q96I99 432 aa17.01■□□□□ 0.31
NPTN-201ENST00000345330 CHMP4AQ9BY43 222 aa17.01■□□□□ 0.31
NPTN-201ENST00000345330 C9orf78Q9NZ63 289 aaPredicted RBP17.01■□□□□ 0.31
NPTN-201ENST00000345330 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.01■□□□□ 0.31
NPTN-201ENST00000345330 ZCRB1Q8TBF4 217 aaKnown RBP17.01■□□□□ 0.31
NPTN-201ENST00000345330 ALDH1L1O75891 902 aa17■□□□□ 0.31
NPTN-201ENST00000345330 TTC5Q8N0Z6 440 aa17■□□□□ 0.31
NPTN-201ENST00000345330 JARID2Q92833 1246 aaPredicted RBP17■□□□□ 0.31
NPTN-201ENST00000345330 HSCBQ8IWL3 235 aa17■□□□□ 0.31
NPTN-201ENST00000345330 SNX21Q969T3 373 aa17■□□□□ 0.31
NPTN-201ENST00000345330 STAP2Q9UGK3 403 aa17■□□□□ 0.31
NPTN-201ENST00000345330 NHSL1Q5SYE7 1610 aa17■□□□□ 0.31
NPTN-201ENST00000345330 MAP4K4O95819 1239 aaPredicted RBP16.99■□□□□ 0.31
NPTN-201ENST00000345330 SNRPA1P09661 255 aaKnown RBP16.99■□□□□ 0.31
NPTN-201ENST00000345330 RIC3Q7Z5B4 369 aa16.99■□□□□ 0.31
NPTN-201ENST00000345330 LINS1Q8NG48 757 aa16.99■□□□□ 0.31
NPTN-201ENST00000345330 DDX54Q8TDD1 881 aaKnown RBP16.99■□□□□ 0.31
NPTN-201ENST00000345330 SHANK3Q9BYB0 1731 aa16.99■□□□□ 0.31
NPTN-201ENST00000345330 IL25Q9H293 177 aa16.99■□□□□ 0.31
NPTN-201ENST00000345330 GRM8O00222 908 aa16.98■□□□□ 0.31
NPTN-201ENST00000345330 RILPL2Q969X0 211 aa16.98■□□□□ 0.31
NPTN-201ENST00000345330 FMNL2Q96PY5 1086 aa16.98■□□□□ 0.31
NPTN-201ENST00000345330 BICC1Q9H694 974 aaKnown RBP16.98■□□□□ 0.31
NPTN-201ENST00000345330 PARP4Q9UKK3 1724 aaKnown RBP16.98■□□□□ 0.31
NPTN-201ENST00000345330 MTX1Q13505 466 aa16.98■□□□□ 0.31
NPTN-201ENST00000345330 MYD88Q99836 296 aa16.98■□□□□ 0.31
NPTN-201ENST00000345330 CARD10Q9BWT7 1032 aa16.98■□□□□ 0.31
NPTN-201ENST00000345330 FOXD4L1Q9NU39 408 aa16.98■□□□□ 0.31
NPTN-201ENST00000345330 PCDH11XQ9BZA7 1347 aa16.97■□□□□ 0.31
NPTN-201ENST00000345330 PCDH11YQ9BZA8 1340 aa16.97■□□□□ 0.31
NPTN-201ENST00000345330 NEURL1BA8MQ27 555 aa16.97■□□□□ 0.31
NPTN-201ENST00000345330 PI4K2BQ8TCG2 481 aa16.97■□□□□ 0.31
NPTN-201ENST00000345330 TRIM6-TRIM34B2RNG4 842 aa16.97■□□□□ 0.31
NPTN-201ENST00000345330 RAB11FIP3O75154 756 aa16.97■□□□□ 0.31
NPTN-201ENST00000345330 HSP90AB1P08238 724 aaKnown RBP16.97■□□□□ 0.31
NPTN-201ENST00000345330 IL2RBP14784 551 aa16.97■□□□□ 0.31
NPTN-201ENST00000345330 EPHA10Q5JZY3 1008 aa16.97■□□□□ 0.31
NPTN-201ENST00000345330 UTYO14607 1347 aa16.96■□□□□ 0.31
NPTN-201ENST00000345330 NBPF26B4DH59 902 aa16.96■□□□□ 0.31
NPTN-201ENST00000345330 DDX58O95786 925 aaKnown RBP16.96■□□□□ 0.31
NPTN-201ENST00000345330 DDIT3P35638 169 aa16.96■□□□□ 0.31
NPTN-201ENST00000345330 NBPF14Q5TI25 921 aa16.96■□□□□ 0.31
NPTN-201ENST00000345330 NBPF10Q6P3W6 841 aaKnown RBP16.96■□□□□ 0.31
NPTN-201ENST00000345330 NBPF15Q8N660 670 aa16.96■□□□□ 0.31
NPTN-201ENST00000345330 PLEKHG2Q9H7P9 1386 aa16.96■□□□□ 0.31
NPTN-201ENST00000345330 KLHDC4Q8TBB5 520 aa16.96■□□□□ 0.3
NPTN-201ENST00000345330 CHMLP26374 656 aa16.95■□□□□ 0.3
NPTN-201ENST00000345330 EVA1CP58658 441 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms