RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 PTCD1O75127 700 aaKnown RBP18.71■□□□□ 0.59
CXCL12-201ENST00000343575 PROSER3Q2NL68 480 aa18.71■□□□□ 0.59
CXCL12-201ENST00000343575 STK31Q9BXU1 1019 aa18.71■□□□□ 0.59
CXCL12-201ENST00000343575 ABCC4O15439 1325 aa18.7■□□□□ 0.58
CXCL12-201ENST00000343575 ANXA1P04083 346 aa18.7■□□□□ 0.58
CXCL12-201ENST00000343575 FAM182BQ5T319 152 aa18.7■□□□□ 0.58
CXCL12-201ENST00000343575 TMEM57Q8N5G2 664 aa18.7■□□□□ 0.58
CXCL12-201ENST00000343575 SYTL4Q96C24 671 aaPredicted RBP18.7■□□□□ 0.58
CXCL12-201ENST00000343575 PHAXQ9H814 394 aaKnown RBP18.7■□□□□ 0.58
CXCL12-201ENST00000343575 RGS17Q9UGC6 210 aaPredicted RBP18.69■□□□□ 0.58
CXCL12-201ENST00000343575 PTPRCP08575 1304 aa18.69■□□□□ 0.58
CXCL12-201ENST00000343575 FLIIQ13045 1269 aa18.69■□□□□ 0.58
CXCL12-201ENST00000343575 MVPQ14764 893 aaKnown RBP18.69■□□□□ 0.58
CXCL12-201ENST00000343575 SLC4A9Q96Q91 983 aa18.69■□□□□ 0.58
CXCL12-201ENST00000343575 ZNF772Q68DY9 489 aaPredicted RBP18.68■□□□□ 0.58
CXCL12-201ENST00000343575 PTF1AQ7RTS3 328 aa18.68■□□□□ 0.58
CXCL12-201ENST00000343575 LRP10Q7Z4F1 713 aa18.68■□□□□ 0.58
CXCL12-201ENST00000343575 FTSJ3Q8IY81 847 aaKnown RBP18.68■□□□□ 0.58
CXCL12-201ENST00000343575 B4GALNT3Q6L9W6 998 aa18.67■□□□□ 0.58
CXCL12-201ENST00000343575 API5Q9BZZ5 524 aaKnown RBP18.67■□□□□ 0.58
CXCL12-201ENST00000343575 DBF4Q9UBU7 674 aaPredicted RBP18.67■□□□□ 0.58
CXCL12-201ENST00000343575 MS4A1P11836 297 aa18.67■□□□□ 0.58
CXCL12-201ENST00000343575 F6X3S4 739 aa18.66■□□□□ 0.58
CXCL12-201ENST00000343575 LAMB4A4D0S4 1761 aa18.66■□□□□ 0.58
CXCL12-201ENST00000343575 CHMP4AQ9BY43 222 aa18.65■□□□□ 0.58
CXCL12-201ENST00000343575 DDX21Q9NR30 783 aaKnown RBP eCLIP18.65■□□□□ 0.58
CXCL12-201ENST00000343575 BRWD3Q6RI45 1802 aa18.65■□□□□ 0.58
CXCL12-201ENST00000343575 PIP4K2AP48426 406 aaPredicted RBP18.65■□□□□ 0.58
CXCL12-201ENST00000343575 NBPF26B4DH59 902 aa18.64■□□□□ 0.57
CXCL12-201ENST00000343575 RBM6P78332 1123 aaKnown RBP18.64■□□□□ 0.57
CXCL12-201ENST00000343575 NBPF14Q5TI25 921 aa18.64■□□□□ 0.57
CXCL12-201ENST00000343575 NBPF10Q6P3W6 841 aaKnown RBP18.64■□□□□ 0.57
CXCL12-201ENST00000343575 ITPRIPQ8IWB1 547 aa18.64■□□□□ 0.57
CXCL12-201ENST00000343575 VSIG10Q8N0Z9 540 aa18.64■□□□□ 0.57
CXCL12-201ENST00000343575 NBPF15Q8N660 670 aa18.64■□□□□ 0.57
CXCL12-201ENST00000343575 FKBP5Q13451 457 aaPredicted RBP18.63■□□□□ 0.57
CXCL12-201ENST00000343575 INTS3Q68E01 1043 aaKnown RBP18.63■□□□□ 0.57
CXCL12-201ENST00000343575 DNAJC10Q8IXB1 793 aa18.63■□□□□ 0.57
CXCL12-201ENST00000343575 RBM42Q9BTD8 480 aaKnown RBP18.63■□□□□ 0.57
CXCL12-201ENST00000343575 NOP58Q9Y2X3 529 aaKnown RBP18.63■□□□□ 0.57
CXCL12-201ENST00000343575 ZBTB7BO15156 539 aaPredicted RBP18.62■□□□□ 0.57
CXCL12-201ENST00000343575 HYPKQ9NX55 129 aa18.62■□□□□ 0.57
CXCL12-201ENST00000343575 SBF2Q86WG5 1849 aa18.62■□□□□ 0.57
CXCL12-201ENST00000343575 A1BGP04217 495 aa18.61■□□□□ 0.57
CXCL12-201ENST00000343575 DDX19BQ9UMR2 479 aa18.61■□□□□ 0.57
CXCL12-201ENST00000343575 NHSQ6T4R5 1651 aa18.61■□□□□ 0.57
CXCL12-201ENST00000343575 ADCY9O60503 1353 aa18.61■□□□□ 0.57
CXCL12-201ENST00000343575 MYL6BP14649 208 aa18.6■□□□□ 0.57
CXCL12-201ENST00000343575 ZBTB40Q9NUA8 1239 aa18.6■□□□□ 0.57
CXCL12-201ENST00000343575 POTEAQ6S8J7 498 aa18.6■□□□□ 0.57
CXCL12-201ENST00000343575 TJP1Q07157 1748 aa18.6■□□□□ 0.57
CXCL12-201ENST00000343575 PI4KAP2A4QPH2 592 aa18.59■□□□□ 0.57
CXCL12-201ENST00000343575 PI4KAP1Q8N8J0 262 aa18.59■□□□□ 0.57
CXCL12-201ENST00000343575 CCDC136Q96JN2 1154 aa18.59■□□□□ 0.57
CXCL12-201ENST00000343575 PCDHB15Q9Y5E8 787 aa18.59■□□□□ 0.57
CXCL12-201ENST00000343575 PALLDQ8WX93 1383 aa18.59■□□□□ 0.57
CXCL12-201ENST00000343575 EP400Q96L91 3159 aa18.59■□□□□ 0.57
CXCL12-201ENST00000343575 DEKP35659 375 aaKnown RBP18.58■□□□□ 0.57
CXCL12-201ENST00000343575 KRT27Q7Z3Y8 459 aa18.58■□□□□ 0.57
CXCL12-201ENST00000343575 ERBB4Q15303 1308 aa18.58■□□□□ 0.57
CXCL12-201ENST00000343575 BTAF1O14981 1849 aa18.58■□□□□ 0.56
CXCL12-201ENST00000343575 CYP19A1P11511 503 aaPredicted RBP18.58■□□□□ 0.56
CXCL12-201ENST00000343575 SLC4A10Q6U841 1118 aa18.58■□□□□ 0.56
CXCL12-201ENST00000343575 XAGE3Q8WTP9 111 aa18.58■□□□□ 0.56
CXCL12-201ENST00000343575 LOC102724428A0A0B4J2F2 783 aa18.57■□□□□ 0.56
CXCL12-201ENST00000343575 SIK1P57059 783 aa18.57■□□□□ 0.56
CXCL12-201ENST00000343575 COPS6Q7L5N1 327 aa18.57■□□□□ 0.56
CXCL12-201ENST00000343575 TEX13AQ9BXU3 409 aaPredicted RBP18.57■□□□□ 0.56
CXCL12-201ENST00000343575 RXRBP28702 533 aa18.56■□□□□ 0.56
CXCL12-201ENST00000343575 AIMP1Q12904 312 aaKnown RBP18.56■□□□□ 0.56
CXCL12-201ENST00000343575 ITPK1Q13572 414 aa18.56■□□□□ 0.56
CXCL12-201ENST00000343575 AAMPQ13685 434 aa18.56■□□□□ 0.56
CXCL12-201ENST00000343575 KSR2Q6VAB6 950 aa18.56■□□□□ 0.56
CXCL12-201ENST00000343575 CICQ96RK0 1608 aaPredicted RBP18.56■□□□□ 0.56
CXCL12-201ENST00000343575 SMARCC1Q92922 1105 aaPredicted RBP18.56■□□□□ 0.56
CXCL12-201ENST00000343575 PXDNLA1KZ92 1463 aa18.56■□□□□ 0.56
CXCL12-201ENST00000343575 N4BP2Q86UW6 1770 aaPredicted RBP18.56■□□□□ 0.56
CXCL12-201ENST00000343575 BEND3Q5T5X7 828 aa18.55■□□□□ 0.56
CXCL12-201ENST00000343575 DNAAF4Q8WXU2 420 aa18.55■□□□□ 0.56
CXCL12-201ENST00000343575 MAP3K2Q9Y2U5 619 aa18.55■□□□□ 0.56
CXCL12-201ENST00000343575 CCT4P50991 539 aaKnown RBP18.54■□□□□ 0.56
CXCL12-201ENST00000343575 STARD3NLO95772 234 aa18.54■□□□□ 0.56
CXCL12-201ENST00000343575 IGHDP01880 384 aa18.54■□□□□ 0.56
CXCL12-201ENST00000343575 ATP6V1AP38606 617 aa18.54■□□□□ 0.56
CXCL12-201ENST00000343575 MEIS3Q99687 375 aa18.54■□□□□ 0.56
CXCL12-201ENST00000343575 KDM2BQ8NHM5 1336 aa18.53■□□□□ 0.56
CXCL12-201ENST00000343575 ANP32AP39687 249 aaKnown RBP18.53■□□□□ 0.56
CXCL12-201ENST00000343575 FAM196AQ6ZSG2 479 aa18.53■□□□□ 0.56
CXCL12-201ENST00000343575 TTLL7Q6ZT98 887 aa18.53■□□□□ 0.56
CXCL12-201ENST00000343575 ZNF831Q5JPB2 1677 aa18.53■□□□□ 0.56
CXCL12-201ENST00000343575 BCL11BQ9C0K0 894 aaPredicted RBP18.52■□□□□ 0.56
CXCL12-201ENST00000343575 ZBTB1Q9Y2K1 713 aa18.52■□□□□ 0.56
CXCL12-201ENST00000343575 MYH14Q7Z406 1995 aaKnown RBP18.52■□□□□ 0.56
CXCL12-201ENST00000343575 ATP10DQ9P241 1426 aa18.52■□□□□ 0.56
CXCL12-201ENST00000343575 KCNQ4P56696 695 aa18.52■□□□□ 0.55
CXCL12-201ENST00000343575 INTS5Q6P9B9 1019 aaKnown RBP18.52■□□□□ 0.55
CXCL12-201ENST00000343575 ANKRD13DQ6ZTN6 518 aa18.52■□□□□ 0.55
CXCL12-201ENST00000343575 USP44Q9H0E7 712 aa18.51■□□□□ 0.55
CXCL12-201ENST00000343575 C1orf115Q9H7X2 142 aa18.51■□□□□ 0.55
CXCL12-201ENST00000343575 DDX58O95786 925 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms