RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 BLOC1S2Q6QNY1 142 aa16.07■□□□□ 0.16
TMEM248-201ENST00000341567 PSMA5P28066 241 aa16.06■□□□□ 0.16
TMEM248-201ENST00000341567 IFNL2Q8IZJ0 200 aa16.06■□□□□ 0.16
TMEM248-201ENST00000341567 ANKRD44Q8N8A2 993 aa16.06■□□□□ 0.16
TMEM248-201ENST00000341567 TBX22Q9Y458 520 aa16.06■□□□□ 0.16
TMEM248-201ENST00000341567 NEO1Q92859 1461 aa16.06■□□□□ 0.16
TMEM248-201ENST00000341567 GLRX3O76003 335 aaKnown RBP16.06■□□□□ 0.16
TMEM248-201ENST00000341567 CLSTN1O94985 981 aa16.06■□□□□ 0.16
TMEM248-201ENST00000341567 MTERF4Q7Z6M4 381 aaKnown RBP16.06■□□□□ 0.16
TMEM248-201ENST00000341567 USP25Q9UHP3 1055 aa16.06■□□□□ 0.16
TMEM248-201ENST00000341567 MCM2P49736 904 aa16.06■□□□□ 0.16
TMEM248-201ENST00000341567 TPD52L1Q16890 204 aaPredicted RBP16.06■□□□□ 0.16
TMEM248-201ENST00000341567 TTC22Q5TAA0 569 aa16.06■□□□□ 0.16
TMEM248-201ENST00000341567 VPS53Q5VIR6 699 aa16.06■□□□□ 0.16
TMEM248-201ENST00000341567 LARP1BQ659C4 914 aaKnown RBP16.06■□□□□ 0.16
TMEM248-201ENST00000341567 HMGN5P82970 282 aaKnown RBP16.05■□□□□ 0.16
TMEM248-201ENST00000341567 ABCF2Q9UG63 623 aa16.05■□□□□ 0.16
TMEM248-201ENST00000341567 TTC21AQ8NDW8 1320 aa16.05■□□□□ 0.16
TMEM248-201ENST00000341567 PDE1AP54750 535 aa16.05■□□□□ 0.16
TMEM248-201ENST00000341567 RHPN1Q8TCX5 695 aa16.05■□□□□ 0.16
TMEM248-201ENST00000341567 PUS7Q96PZ0 661 aaKnown RBP16.05■□□□□ 0.16
TMEM248-201ENST00000341567 PDRG1Q9NUG6 133 aa16.05■□□□□ 0.16
TMEM248-201ENST00000341567 FLT4P35916 1363 aa16.05■□□□□ 0.16
TMEM248-201ENST00000341567 CEP85Q6P2H3 762 aa16.05■□□□□ 0.16
TMEM248-201ENST00000341567 CBX1P83916 185 aa16.05■□□□□ 0.16
TMEM248-201ENST00000341567 TRIM29Q14134 588 aa16.05■□□□□ 0.16
TMEM248-201ENST00000341567 NBPF6Q5VWK0 638 aa16.05■□□□□ 0.16
TMEM248-201ENST00000341567 CADPS2Q86UW7 1296 aa16.05■□□□□ 0.16
TMEM248-201ENST00000341567 ARHGAP45Q92619 1136 aa16.05■□□□□ 0.16
TMEM248-201ENST00000341567 NBPF4Q96M43 638 aa16.05■□□□□ 0.16
TMEM248-201ENST00000341567 KLHDC4Q8TBB5 520 aa16.04■□□□□ 0.16
TMEM248-201ENST00000341567 WDR33Q9C0J8 1336 aaKnown RBP16.04■□□□□ 0.16
TMEM248-201ENST00000341567 ANKRD13DQ6ZTN6 518 aa16.04■□□□□ 0.16
TMEM248-201ENST00000341567 RAB11FIP4Q86YS3 637 aa16.04■□□□□ 0.16
TMEM248-201ENST00000341567 KCNQ3O43525 872 aa16.04■□□□□ 0.16
TMEM248-201ENST00000341567 SMC5Q8IY18 1101 aa16.04■□□□□ 0.16
TMEM248-201ENST00000341567 KLHL34Q8N239 644 aa16.04■□□□□ 0.16
TMEM248-201ENST00000341567 ZNF830Q96NB3 372 aaPredicted RBP16.04■□□□□ 0.16
TMEM248-201ENST00000341567 SDF4Q9BRK5 362 aa16.04■□□□□ 0.16
TMEM248-201ENST00000341567 ERVK-7P63135 1459 aa16.03■□□□□ 0.16
TMEM248-201ENST00000341567 METTL24Q5JXM2 366 aa16.03■□□□□ 0.16
TMEM248-201ENST00000341567 PIBF1Q8WXW3 757 aa16.03■□□□□ 0.16
TMEM248-201ENST00000341567 TBC1D2BQ9UPU7 963 aa16.03■□□□□ 0.16
TMEM248-201ENST00000341567 CCDC82Q8N4S0 544 aa16.03■□□□□ 0.16
TMEM248-201ENST00000341567 ACSBG1Q96GR2 724 aa16.03■□□□□ 0.16
TMEM248-201ENST00000341567 GUCY1B3Q02153 619 aa16.03■□□□□ 0.16
TMEM248-201ENST00000341567 DDX46Q7L014 1031 aaKnown RBP16.03■□□□□ 0.16
TMEM248-201ENST00000341567 PDCL3Q9H2J4 239 aa16.03■□□□□ 0.16
TMEM248-201ENST00000341567 HYPKQ9NX55 129 aa16.03■□□□□ 0.16
TMEM248-201ENST00000341567 MARCH6O60337 910 aa16.02■□□□□ 0.16
TMEM248-201ENST00000341567 ZHX1Q9UKY1 873 aaPredicted RBP16.02■□□□□ 0.16
TMEM248-201ENST00000341567 KLHL40Q2TBA0 621 aa16.02■□□□□ 0.16
TMEM248-201ENST00000341567 NPC1L1Q9UHC9 1359 aa16.02■□□□□ 0.16
TMEM248-201ENST00000341567 RAB11FIP3O75154 756 aa16.02■□□□□ 0.15
TMEM248-201ENST00000341567 CCDC73Q6ZRK6 1079 aa16.02■□□□□ 0.15
TMEM248-201ENST00000341567 KDM5CP41229 1560 aa16.02■□□□□ 0.15
TMEM248-201ENST00000341567 STARD3NLO95772 234 aa16.02■□□□□ 0.15
TMEM248-201ENST00000341567 CAMK4Q16566 473 aa16.02■□□□□ 0.15
TMEM248-201ENST00000341567 LRRC2Q9BYS8 371 aa16.01■□□□□ 0.15
TMEM248-201ENST00000341567 TRMT112Q9UI30 125 aaKnown RBP16.01■□□□□ 0.15
TMEM248-201ENST00000341567 GOLIM4O00461 696 aa16.01■□□□□ 0.15
TMEM248-201ENST00000341567 ZSCAN23Q3MJ62 389 aa16.01■□□□□ 0.15
TMEM248-201ENST00000341567 ERICH2A1L162 156 aa16.01■□□□□ 0.15
TMEM248-201ENST00000341567 MAPK8IP2Q13387 824 aaPredicted RBP16.01■□□□□ 0.15
TMEM248-201ENST00000341567 C19orf44Q9H6X5 657 aa16.01■□□□□ 0.15
TMEM248-201ENST00000341567 ECHDC1Q9NTX5 307 aa16.01■□□□□ 0.15
TMEM248-201ENST00000341567 PRDM15P57071 1507 aaPredicted RBP16■□□□□ 0.15
TMEM248-201ENST00000341567 HAND2P61296 217 aa16■□□□□ 0.15
TMEM248-201ENST00000341567 PLEKHM2Q8IWE5 1019 aa16■□□□□ 0.15
TMEM248-201ENST00000341567 DCTPP1Q9H773 170 aa16■□□□□ 0.15
TMEM248-201ENST00000341567 PIK3R4Q99570 1358 aa16■□□□□ 0.15
TMEM248-201ENST00000341567 CHL1O00533 1208 aa15.99■□□□□ 0.15
TMEM248-201ENST00000341567 IFIT1P09914 478 aaKnown RBP15.99■□□□□ 0.15
TMEM248-201ENST00000341567 LMBR1LQ6UX01 489 aa15.99■□□□□ 0.15
TMEM248-201ENST00000341567 FILIP1Q7Z7B0 1213 aa15.99■□□□□ 0.15
TMEM248-201ENST00000341567 PLXNC1O60486 1568 aa15.99■□□□□ 0.15
TMEM248-201ENST00000341567 PNMA6EA0A0J9YXQ4 647 aa15.99■□□□□ 0.15
TMEM248-201ENST00000341567 PRIM1P49642 420 aaKnown RBP15.99■□□□□ 0.15
TMEM248-201ENST00000341567 IQSEC3Q9UPP2 1182 aaPredicted RBP15.99■□□□□ 0.15
TMEM248-201ENST00000341567 TMEM2Q9UHN6 1383 aa15.99■□□□□ 0.15
TMEM248-201ENST00000341567 PRR36Q9H6K5 1346 aa15.99■□□□□ 0.15
TMEM248-201ENST00000341567 HIP1O00291 1037 aa15.99■□□□□ 0.15
TMEM248-201ENST00000341567 SNRPA1P09661 255 aaKnown RBP15.99■□□□□ 0.15
TMEM248-201ENST00000341567 CPA1P15085 419 aa15.99■□□□□ 0.15
TMEM248-201ENST00000341567 AEBP2Q6ZN18 517 aaPredicted RBP15.99■□□□□ 0.15
TMEM248-201ENST00000341567 CCDC192P0DO97 292 aa15.99■□□□□ 0.15
TMEM248-201ENST00000341567 NECAB1Q8N987 351 aa15.99■□□□□ 0.15
TMEM248-201ENST00000341567 NUP133Q8WUM0 1156 aa15.99■□□□□ 0.15
TMEM248-201ENST00000341567 NBPF7P0C2Y1 421 aaPredicted RBP15.98■□□□□ 0.15
TMEM248-201ENST00000341567 AKAP4Q5JQC9 854 aa15.98■□□□□ 0.15
TMEM248-201ENST00000341567 IP6K1Q92551 441 aa15.98■□□□□ 0.15
TMEM248-201ENST00000341567 BLMP54132 1417 aaPredicted RBP15.98■□□□□ 0.15
TMEM248-201ENST00000341567 MSH6P52701 1360 aa15.98■□□□□ 0.15
TMEM248-201ENST00000341567 CCT2P78371 535 aaKnown RBP15.98■□□□□ 0.15
TMEM248-201ENST00000341567 ZGPATQ8N5A5 531 aaKnown RBP15.98■□□□□ 0.15
TMEM248-201ENST00000341567 TFIP11Q9UBB9 837 aaKnown RBP15.98■□□□□ 0.15
TMEM248-201ENST00000341567 NDUFB9Q9Y6M9 179 aa15.98■□□□□ 0.15
TMEM248-201ENST00000341567 EXOC5O00471 708 aa15.98■□□□□ 0.15
TMEM248-201ENST00000341567 NOL10Q9BSC4 688 aaKnown RBP15.98■□□□□ 0.15
TMEM248-201ENST00000341567 ATP8B2P98198 1209 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms