RNA–Protein interactions for RNA: ENST00000341547.8

LMO7-202, Transcript of LIM domain 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO7, Length 7,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-202ENST00000341547 ANKRD30BQ9BXX2 1392 aa8.64□□□□□ -1.03
LMO7-202ENST00000341547 PAFAH1B1P43034 410 aa8.64□□□□□ -1.03
LMO7-202ENST00000341547 CACNA2D4Q7Z3S7 1137 aa8.64□□□□□ -1.03
LMO7-202ENST00000341547 NUP88Q99567 741 aaPredicted RBP8.64□□□□□ -1.03
LMO7-202ENST00000341547 MATR3P43243 847 aaKnown RBP eCLIP8.63□□□□□ -1.032e-6■■■■□ 23.9
LMO7-202ENST00000341547 PRIM1P49642 420 aaKnown RBP8.63□□□□□ -1.03
LMO7-202ENST00000341547 HDAC1Q13547 482 aaPredicted RBP8.63□□□□□ -1.03
LMO7-202ENST00000341547 MCM6Q14566 821 aa8.63□□□□□ -1.03
LMO7-202ENST00000341547 ARFGAP3Q9NP61 516 aa8.63□□□□□ -1.03
LMO7-202ENST00000341547 BMP2KQ9NSY1 1161 aaPredicted RBP8.63□□□□□ -1.03
LMO7-202ENST00000341547 NLRP2Q9NX02 1062 aa8.63□□□□□ -1.03
LMO7-202ENST00000341547 TOP2BQ02880 1626 aa8.63□□□□□ -1.03
LMO7-202ENST00000341547 TUBB4BP68371 445 aa8.63□□□□□ -1.03
LMO7-202ENST00000341547 CDKL5O76039 1030 aa8.63□□□□□ -1.03
LMO7-202ENST00000341547 LIMCH1Q9UPQ0 1083 aa8.63□□□□□ -1.03
LMO7-202ENST00000341547 KIF6Q6ZMV9 814 aa8.63□□□□□ -1.03
LMO7-202ENST00000341547 NUTM1Q86Y26 1132 aa8.63□□□□□ -1.03
LMO7-202ENST00000341547 CTNNBL1Q8WYA6 563 aaPredicted RBP8.63□□□□□ -1.03
LMO7-202ENST00000341547 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.63□□□□□ -1.03
LMO7-202ENST00000341547 RNF216Q9NWF9 866 aaPredicted RBP8.63□□□□□ -1.03
LMO7-202ENST00000341547 RSPH14Q9UHP6 348 aa8.63□□□□□ -1.03
LMO7-202ENST00000341547 STX6O43752 255 aa8.63□□□□□ -1.03
LMO7-202ENST00000341547 TDO2P48775 406 aa8.63□□□□□ -1.03
LMO7-202ENST00000341547 DMTNQ08495 405 aa8.63□□□□□ -1.03
LMO7-202ENST00000341547 SOGA3Q5TF21 947 aa8.63□□□□□ -1.03
LMO7-202ENST00000341547 CCDC82Q8N4S0 544 aa8.63□□□□□ -1.03
LMO7-202ENST00000341547 FAM200AQ8TCP9 573 aa8.63□□□□□ -1.03
LMO7-202ENST00000341547 PTPN23Q9H3S7 1636 aa8.62□□□□□ -1.03
LMO7-202ENST00000341547 HCLS1P14317 486 aaPredicted RBP8.62□□□□□ -1.03
LMO7-202ENST00000341547 LIG1P18858 919 aa8.62□□□□□ -1.03
LMO7-202ENST00000341547 NLRP6P59044 892 aa8.62□□□□□ -1.03
LMO7-202ENST00000341547 SULT6B1Q6IMI4 303 aa8.62□□□□□ -1.03
LMO7-202ENST00000341547 ZNF644Q9H582 1327 aaPredicted RBP8.62□□□□□ -1.03
LMO7-202ENST00000341547 GIGYF2Q6Y7W6 1299 aaKnown RBP8.62□□□□□ -1.03
LMO7-202ENST00000341547 NBPF11Q86T75 865 aa8.62□□□□□ -1.03
LMO7-202ENST00000341547 CCDC97Q96F63 343 aaPredicted RBP8.62□□□□□ -1.03
LMO7-202ENST00000341547 MACROD2A1Z1Q3 448 aa8.62□□□□□ -1.03
LMO7-202ENST00000341547 NUCB1Q02818 461 aa8.62□□□□□ -1.03
LMO7-202ENST00000341547 NACAP1Q9BZK3 213 aa8.62□□□□□ -1.03
LMO7-202ENST00000341547 ANAPC15P60006 121 aa8.62□□□□□ -1.03
LMO7-202ENST00000341547 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.62□□□□□ -1.03
LMO7-202ENST00000341547 USP5P45974 858 aa8.61□□□□□ -1.03
LMO7-202ENST00000341547 MAATS1Q7Z4T9 603 aa8.61□□□□□ -1.03
LMO7-202ENST00000341547 MICALL1Q8N3F8 863 aa8.61□□□□□ -1.03
LMO7-202ENST00000341547 UBAC1Q9BSL1 405 aa8.61□□□□□ -1.03
LMO7-202ENST00000341547 GIMAP6Q6P9H5 292 aa8.61□□□□□ -1.03
LMO7-202ENST00000341547 SLC12A5Q9H2X9 1139 aa8.61□□□□□ -1.03
LMO7-202ENST00000341547 GCOM1H8Y6P7 765 aaPredicted RBP8.61□□□□□ -1.03
LMO7-202ENST00000341547 MYZAPP0CAP1 466 aa8.61□□□□□ -1.03
LMO7-202ENST00000341547 TDRD12Q587J7 1177 aaKnown RBP8.61□□□□□ -1.03
LMO7-202ENST00000341547 GAS2L2Q8NHY3 880 aa8.61□□□□□ -1.03
LMO7-202ENST00000341547 ERO1AQ96HE7 468 aa8.61□□□□□ -1.03
LMO7-202ENST00000341547 RAB11FIP3O75154 756 aa8.61□□□□□ -1.03
LMO7-202ENST00000341547 ZSCAN22P10073 491 aaPredicted RBP8.61□□□□□ -1.03
LMO7-202ENST00000341547 ZNF165P49910 485 aa8.61□□□□□ -1.03
LMO7-202ENST00000341547 PRPF4BQ13523 1007 aaKnown RBP8.61□□□□□ -1.03
LMO7-202ENST00000341547 KLHL34Q8N239 644 aa8.61□□□□□ -1.03
LMO7-202ENST00000341547 SKILP12757 684 aa8.61□□□□□ -1.03
LMO7-202ENST00000341547 KRBA2Q6ZNG9 492 aa8.61□□□□□ -1.03
LMO7-202ENST00000341547 CCDC186Q7Z3E2 898 aa8.61□□□□□ -1.03
LMO7-202ENST00000341547 ABTB2Q8N961 1025 aa8.61□□□□□ -1.03
LMO7-202ENST00000341547 TTC22Q5TAA0 569 aa8.6□□□□□ -1.03
LMO7-202ENST00000341547 CEP131Q9UPN4 1083 aa8.6□□□□□ -1.03
LMO7-202ENST00000341547 CAPN2P17655 700 aa8.6□□□□□ -1.03
LMO7-202ENST00000341547 ZNF445P59923 1031 aa8.6□□□□□ -1.03
LMO7-202ENST00000341547 CCDC57Q2TAC2 916 aa8.6□□□□□ -1.03
LMO7-202ENST00000341547 CEP112Q8N8E3 955 aa8.6□□□□□ -1.03
LMO7-202ENST00000341547 CNNM3Q8NE01 707 aa8.6□□□□□ -1.03
LMO7-202ENST00000341547 GOLGA1Q92805 767 aa8.6□□□□□ -1.03
LMO7-202ENST00000341547 DRC1Q96MC2 740 aa8.6□□□□□ -1.03
LMO7-202ENST00000341547 JADE2Q9NQC1 790 aa8.6□□□□□ -1.03
LMO7-202ENST00000341547 ZNF500O60304 480 aaPredicted RBP8.6□□□□□ -1.03
LMO7-202ENST00000341547 GNG11P61952 73 aa8.6□□□□□ -1.03
LMO7-202ENST00000341547 GJB2P29033 226 aa8.6□□□□□ -1.03
LMO7-202ENST00000341547 CCT2P78371 535 aaKnown RBP8.6□□□□□ -1.03
LMO7-202ENST00000341547 USP48Q86UV5 1035 aa8.6□□□□□ -1.03
LMO7-202ENST00000341547 C10orf67Q8IYJ2 551 aa8.6□□□□□ -1.03
LMO7-202ENST00000341547 FSIP1Q8NA03 581 aa8.6□□□□□ -1.03
LMO7-202ENST00000341547 TMCO5BA8MYB1 307 aa8.6□□□□□ -1.03
LMO7-202ENST00000341547 USO1O60763 962 aaKnown RBP8.6□□□□□ -1.03
LMO7-202ENST00000341547 HSPA4P34932 840 aa8.6□□□□□ -1.03
LMO7-202ENST00000341547 SMC1AQ14683 1233 aaKnown RBP8.6□□□□□ -1.03
LMO7-202ENST00000341547 FKBP15Q5T1M5 1219 aa8.6□□□□□ -1.03
LMO7-202ENST00000341547 PRPF40BQ6NWY9 871 aaKnown RBP8.6□□□□□ -1.03
LMO7-202ENST00000341547 CCDC12Q8WUD4 166 aaPredicted RBP8.6□□□□□ -1.03
LMO7-202ENST00000341547 JPH4Q96JJ6 628 aa8.6□□□□□ -1.03
LMO7-202ENST00000341547 TTC12Q9H892 705 aaPredicted RBP8.6□□□□□ -1.03
LMO7-202ENST00000341547 AQRO60306 1485 aaKnown RBP eCLIP8.6□□□□□ -1.034e-8■□□□□ 9.8
LMO7-202ENST00000341547 CCDC160A6NGH7 325 aa8.6□□□□□ -1.03
LMO7-202ENST00000341547 NOP2P46087 812 aaKnown RBP8.6□□□□□ -1.03
LMO7-202ENST00000341547 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.6□□□□□ -1.03
LMO7-202ENST00000341547 WASF1Q92558 559 aa8.6□□□□□ -1.03
LMO7-202ENST00000341547 CCDC85AQ96PX6 553 aaPredicted RBP8.6□□□□□ -1.03
LMO7-202ENST00000341547 PCF11O94913 1555 aaKnown RBP8.6□□□□□ -1.03
LMO7-202ENST00000341547 HSF2BPO75031 334 aa8.59□□□□□ -1.03
LMO7-202ENST00000341547 STAMBPO95630 424 aa8.59□□□□□ -1.03
LMO7-202ENST00000341547 CKAP4Q07065 602 aaKnown RBP8.59□□□□□ -1.03
LMO7-202ENST00000341547 C8orf76Q96K31 380 aa8.59□□□□□ -1.03
LMO7-202ENST00000341547 BOLA2Q9H3K6 86 aa8.59□□□□□ -1.03
LMO7-202ENST00000341547 RPRD2Q5VT52 1461 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms