RNA–Protein interactions for RNA: ENST00000339360.9

RAP1GDS1-202, Transcript of Rap1 GTPase-GDP dissociation stimulator 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAP1GDS1, Length 2,092 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1GDS1-202ENST00000339360 CCDC87Q9NVE4 849 aa7.74□□□□□ -1.17
RAP1GDS1-202ENST00000339360 ATF5Q9Y2D1 282 aaPredicted RBP7.74□□□□□ -1.17
RAP1GDS1-202ENST00000339360 LAS1LQ9Y4W2 734 aaKnown RBP7.74□□□□□ -1.17
RAP1GDS1-202ENST00000339360 APAF1O14727 1248 aa7.73□□□□□ -1.17
RAP1GDS1-202ENST00000339360 ZPR1O75312 459 aa7.73□□□□□ -1.17
RAP1GDS1-202ENST00000339360 RC3H1Q5TC82 1133 aaKnown RBP7.73□□□□□ -1.17
RAP1GDS1-202ENST00000339360 DIEXFQ68CQ4 756 aaKnown RBP7.73□□□□□ -1.17
RAP1GDS1-202ENST00000339360 ZNF496Q96IT1 587 aaPredicted RBP7.73□□□□□ -1.17
RAP1GDS1-202ENST00000339360 ARXQ96QS3 562 aa7.73□□□□□ -1.17
RAP1GDS1-202ENST00000339360 THUMPD2Q9BTF0 503 aaKnown RBP7.73□□□□□ -1.17
RAP1GDS1-202ENST00000339360 SNRPA1P09661 255 aaKnown RBP7.72□□□□□ -1.17
RAP1GDS1-202ENST00000339360 CANXP27824 592 aaKnown RBP7.72□□□□□ -1.17
RAP1GDS1-202ENST00000339360 MSL1Q68DK7 614 aa7.72□□□□□ -1.17
RAP1GDS1-202ENST00000339360 COL23A1Q86Y22 540 aaPredicted RBP7.72□□□□□ -1.17
RAP1GDS1-202ENST00000339360 A0A087WZG4 1122 aa7.72□□□□□ -1.17
RAP1GDS1-202ENST00000339360 NPHP1O15259 732 aa7.72□□□□□ -1.17
RAP1GDS1-202ENST00000339360 RPS6KA4O75676 772 aa7.72□□□□□ -1.17
RAP1GDS1-202ENST00000339360 ZBTB1Q9Y2K1 713 aa7.72□□□□□ -1.17
RAP1GDS1-202ENST00000339360 ANKRD36CQ5JPF3 1778 aa7.72□□□□□ -1.17
RAP1GDS1-202ENST00000339360 SLC4A9Q96Q91 983 aa7.71□□□□□ -1.17
RAP1GDS1-202ENST00000339360 PDGFDQ9GZP0 370 aaPredicted RBP7.71□□□□□ -1.17
RAP1GDS1-202ENST00000339360 BABAM1Q9NWV8 329 aa7.71□□□□□ -1.17
RAP1GDS1-202ENST00000339360 SOS1Q07889 1333 aaPredicted RBP7.71□□□□□ -1.18
RAP1GDS1-202ENST00000339360 CYP19A1P11511 503 aaPredicted RBP7.71□□□□□ -1.18
RAP1GDS1-202ENST00000339360 GNAI1P63096 354 aa7.71□□□□□ -1.18
RAP1GDS1-202ENST00000339360 CCDC184Q52MB2 194 aa7.71□□□□□ -1.18
RAP1GDS1-202ENST00000339360 ZNF652Q9Y2D9 606 aa7.71□□□□□ -1.18
RAP1GDS1-202ENST00000339360 AFDNP55196 1824 aaKnown RBP7.7□□□□□ -1.18
RAP1GDS1-202ENST00000339360 NLGN1Q8N2Q7 840 aa7.7□□□□□ -1.18
RAP1GDS1-202ENST00000339360 CHMP4AQ9BY43 222 aa7.7□□□□□ -1.18
RAP1GDS1-202ENST00000339360 MIS18AQ9NYP9 233 aa7.7□□□□□ -1.18
RAP1GDS1-202ENST00000339360 PARP3Q9Y6F1 533 aa7.7□□□□□ -1.18
RAP1GDS1-202ENST00000339360 USP42Q9H9J4 1324 aaKnown RBP7.7□□□□□ -1.18
RAP1GDS1-202ENST00000339360 CCER2I3L3R5 266 aa7.69□□□□□ -1.18
RAP1GDS1-202ENST00000339360 IL6STP40189 918 aaPredicted RBP7.69□□□□□ -1.18
RAP1GDS1-202ENST00000339360 KIF6Q6ZMV9 814 aa7.69□□□□□ -1.18
RAP1GDS1-202ENST00000339360 ARHGEF1Q92888 912 aaKnown RBP7.69□□□□□ -1.18
RAP1GDS1-202ENST00000339360 NUP98P52948 1817 aa7.69□□□□□ -1.18
RAP1GDS1-202ENST00000339360 KIF13BQ9NQT8 1826 aa7.69□□□□□ -1.18
RAP1GDS1-202ENST00000339360 CACNA1SQ13698 1873 aa7.69□□□□□ -1.18
RAP1GDS1-202ENST00000339360 KCNQ3O43525 872 aa7.69□□□□□ -1.18
RAP1GDS1-202ENST00000339360 EIF4A1P60842 406 aaKnown RBP7.69□□□□□ -1.18
RAP1GDS1-202ENST00000339360 NGEFQ8N5V2 710 aa7.69□□□□□ -1.18
RAP1GDS1-202ENST00000339360 CFAP44Q96MT7 982 aa7.69□□□□□ -1.18
RAP1GDS1-202ENST00000339360 IFT57Q9NWB7 429 aa7.69□□□□□ -1.18
RAP1GDS1-202ENST00000339360 SALL2Q9Y467 1007 aaPredicted RBP7.69□□□□□ -1.18
RAP1GDS1-202ENST00000339360 ERBB4Q15303 1308 aa7.69□□□□□ -1.18
RAP1GDS1-202ENST00000339360 CACNA1FO60840 1977 aa7.68□□□□□ -1.18
RAP1GDS1-202ENST00000339360 MMP10P09238 476 aa7.68□□□□□ -1.18
RAP1GDS1-202ENST00000339360 EIF2S2P20042 333 aaKnown RBP7.68□□□□□ -1.18
RAP1GDS1-202ENST00000339360 DZIP3Q86Y13 1208 aaKnown RBP7.68□□□□□ -1.18
RAP1GDS1-202ENST00000339360 FHDC1Q9C0D6 1143 aaPredicted RBP7.68□□□□□ -1.18
RAP1GDS1-202ENST00000339360 TRIM35Q9UPQ4 493 aa7.68□□□□□ -1.18
RAP1GDS1-202ENST00000339360 N4BP2Q86UW6 1770 aaPredicted RBP7.68□□□□□ -1.18
RAP1GDS1-202ENST00000339360 ARFGEF2Q9Y6D5 1785 aa7.68□□□□□ -1.18
RAP1GDS1-202ENST00000339360 CARMIL3Q8ND23 1372 aa7.67□□□□□ -1.18
RAP1GDS1-202ENST00000339360 GIGYF1O75420 1035 aaPredicted RBP7.67□□□□□ -1.18
RAP1GDS1-202ENST00000339360 PTGER2P43116 358 aa7.67□□□□□ -1.18
RAP1GDS1-202ENST00000339360 CCDC27Q2M243 656 aa7.67□□□□□ -1.18
RAP1GDS1-202ENST00000339360 USPL1Q5W0Q7 1092 aa7.67□□□□□ -1.18
RAP1GDS1-202ENST00000339360 INTS5Q6P9B9 1019 aaKnown RBP7.67□□□□□ -1.18
RAP1GDS1-202ENST00000339360 PELP1Q8IZL8 1130 aaKnown RBP7.67□□□□□ -1.18
RAP1GDS1-202ENST00000339360 NARFQ9UHQ1 456 aa7.67□□□□□ -1.18
RAP1GDS1-202ENST00000339360 DLEC1Q9Y238 1755 aa7.67□□□□□ -1.18
RAP1GDS1-202ENST00000339360 SENP3-EIF4A1A0A087X0R7 540 aa7.67□□□□□ -1.18
RAP1GDS1-202ENST00000339360 A1BGP04217 495 aa7.67□□□□□ -1.18
RAP1GDS1-202ENST00000339360 HOXB7P09629 217 aa7.67□□□□□ -1.18
RAP1GDS1-202ENST00000339360 GYS1P13807 737 aa7.67□□□□□ -1.18
RAP1GDS1-202ENST00000339360 MYL6BP14649 208 aa7.67□□□□□ -1.18
RAP1GDS1-202ENST00000339360 HDGFL1Q5TGJ6 251 aa7.67□□□□□ -1.18
RAP1GDS1-202ENST00000339360 SMIM5Q71RC9 77 aa7.67□□□□□ -1.18
RAP1GDS1-202ENST00000339360 AMIGO3Q86WK7 504 aa7.67□□□□□ -1.18
RAP1GDS1-202ENST00000339360 SRP68Q9UHB9 627 aaKnown RBP7.67□□□□□ -1.18
RAP1GDS1-202ENST00000339360 CHD4Q14839 1912 aa7.67□□□□□ -1.18
RAP1GDS1-202ENST00000339360 NRXN2Q9P2S2 1712 aa7.67□□□□□ -1.18
RAP1GDS1-202ENST00000339360 PRAMEF22A3QJZ6 481 aa7.66□□□□□ -1.18
RAP1GDS1-202ENST00000339360 PIP4K2AP48426 406 aaPredicted RBP7.66□□□□□ -1.18
RAP1GDS1-202ENST00000339360 MBIPQ9NS73 344 aa7.66□□□□□ -1.18
RAP1GDS1-202ENST00000339360 USP16Q9Y5T5 823 aa7.66□□□□□ -1.18
RAP1GDS1-202ENST00000339360 C10orf71Q711Q0 1435 aa7.66□□□□□ -1.18
RAP1GDS1-202ENST00000339360 IL16Q14005 1332 aa7.66□□□□□ -1.18
RAP1GDS1-202ENST00000339360 EIF5P55010 431 aaKnown RBP7.66□□□□□ -1.18
RAP1GDS1-202ENST00000339360 NCBP3Q53F19 620 aaKnown RBP7.66□□□□□ -1.18
RAP1GDS1-202ENST00000339360 BICDL1Q6ZP65 573 aa7.66□□□□□ -1.18
RAP1GDS1-202ENST00000339360 WWC1Q8IX03 1113 aa7.66□□□□□ -1.18
RAP1GDS1-202ENST00000339360 NECTIN2Q92692 538 aa7.66□□□□□ -1.18
RAP1GDS1-202ENST00000339360 SGIP1Q9BQI5 828 aa7.66□□□□□ -1.18
RAP1GDS1-202ENST00000339360 STK31Q9BXU1 1019 aa7.66□□□□□ -1.18
RAP1GDS1-202ENST00000339360 MYH16Q9H6N6 1097 aa7.66□□□□□ -1.18
RAP1GDS1-202ENST00000339360 TBC1D2BQ9UPU7 963 aa7.66□□□□□ -1.18
RAP1GDS1-202ENST00000339360 BRCA1P38398 1863 aaKnown RBP7.65□□□□□ -1.18
RAP1GDS1-202ENST00000339360 SRCAPQ6ZRS2 3230 aa7.65□□□□□ -1.18
RAP1GDS1-202ENST00000339360 CHL1O00533 1208 aa7.65□□□□□ -1.18
RAP1GDS1-202ENST00000339360 ST5P78524 1137 aa7.65□□□□□ -1.18
RAP1GDS1-202ENST00000339360 SYT17Q9BSW7 474 aa7.65□□□□□ -1.18
RAP1GDS1-202ENST00000339360 CD2APQ9Y5K6 639 aa7.65□□□□□ -1.18
RAP1GDS1-202ENST00000339360 ARFGEF1Q9Y6D6 1849 aa7.65□□□□□ -1.19
RAP1GDS1-202ENST00000339360 GTF2E1P29083 439 aaPredicted RBP7.64□□□□□ -1.19
RAP1GDS1-202ENST00000339360 FKBP8Q14318 412 aa7.64□□□□□ -1.19
RAP1GDS1-202ENST00000339360 SETDB2Q96T68 719 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms