RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 ZNF790Q6PG37 636 aa16.43■□□□□ 0.22
PRIM1-201ENST00000338193 ZNF496Q96IT1 587 aaPredicted RBP16.43■□□□□ 0.22
PRIM1-201ENST00000338193 YTHDC1Q96MU7 727 aaKnown RBP16.43■□□□□ 0.22
PRIM1-201ENST00000338193 MBIPQ9NS73 344 aa16.43■□□□□ 0.22
PRIM1-201ENST00000338193 COL5A3P25940 1745 aaPredicted RBP16.42■□□□□ 0.22
PRIM1-201ENST00000338193 TXNRD1Q16881 649 aa16.41■□□□□ 0.22
PRIM1-201ENST00000338193 TSPYL4Q9UJ04 414 aa16.41■□□□□ 0.22
PRIM1-201ENST00000338193 CICQ96RK0 1608 aaPredicted RBP16.41■□□□□ 0.22
PRIM1-201ENST00000338193 ZNF831Q5JPB2 1677 aa16.4■□□□□ 0.22
PRIM1-201ENST00000338193 LOC102724428A0A0B4J2F2 783 aa16.4■□□□□ 0.22
PRIM1-201ENST00000338193 PLSCR1O15162 318 aa16.4■□□□□ 0.22
PRIM1-201ENST00000338193 SIK1P57059 783 aa16.4■□□□□ 0.22
PRIM1-201ENST00000338193 EIF4A1P60842 406 aaKnown RBP16.4■□□□□ 0.22
PRIM1-201ENST00000338193 CFAP44Q96MT7 982 aa16.4■□□□□ 0.22
PRIM1-201ENST00000338193 IFT57Q9NWB7 429 aa16.4■□□□□ 0.22
PRIM1-201ENST00000338193 WDR63Q8IWG1 891 aa16.39■□□□□ 0.21
PRIM1-201ENST00000338193 FANCIQ9NVI1 1328 aa16.39■□□□□ 0.21
PRIM1-201ENST00000338193 HEG1Q9ULI3 1381 aa16.39■□□□□ 0.21
PRIM1-201ENST00000338193 BAG6P46379 1132 aa16.38■□□□□ 0.21
PRIM1-201ENST00000338193 CLCN6P51797 869 aa16.38■□□□□ 0.21
PRIM1-201ENST00000338193 SF3B2Q13435 895 aaKnown RBP16.38■□□□□ 0.21
PRIM1-201ENST00000338193 SMIM5Q71RC9 77 aa16.38■□□□□ 0.21
PRIM1-201ENST00000338193 DNAJC10Q8IXB1 793 aa16.38■□□□□ 0.21
PRIM1-201ENST00000338193 LINC00116Q8NCU8 138 aa16.38■□□□□ 0.21
PRIM1-201ENST00000338193 FARP1Q9Y4F1 1045 aaPredicted RBP16.38■□□□□ 0.21
PRIM1-201ENST00000338193 TUBGCP6Q96RT7 1819 aa16.38■□□□□ 0.21
PRIM1-201ENST00000338193 IL16Q14005 1332 aa16.38■□□□□ 0.21
PRIM1-201ENST00000338193 LAMB4A4D0S4 1761 aa16.38■□□□□ 0.21
PRIM1-201ENST00000338193 MYH14Q7Z406 1995 aaKnown RBP16.38■□□□□ 0.21
PRIM1-201ENST00000338193 AMIGO3Q86WK7 504 aa16.38■□□□□ 0.21
PRIM1-201ENST00000338193 CCDC125Q86Z20 511 aa16.38■□□□□ 0.21
PRIM1-201ENST00000338193 C8orf58Q8NAV2 365 aa16.38■□□□□ 0.21
PRIM1-201ENST00000338193 SMARCC1Q92922 1105 aaPredicted RBP16.38■□□□□ 0.21
PRIM1-201ENST00000338193 ANO8Q9HCE9 1232 aaPredicted RBP16.38■□□□□ 0.21
PRIM1-201ENST00000338193 CCNL1Q9UK58 526 aaPredicted RBP16.38■□□□□ 0.21
PRIM1-201ENST00000338193 C4BP0C0L5 1744 aa16.37■□□□□ 0.21
PRIM1-201ENST00000338193 SOCS7O14512 581 aa16.37■□□□□ 0.21
PRIM1-201ENST00000338193 ATP6V1AP38606 617 aa16.37■□□□□ 0.21
PRIM1-201ENST00000338193 GNAI1P63096 354 aa16.37■□□□□ 0.21
PRIM1-201ENST00000338193 SLFN5Q08AF3 891 aa16.37■□□□□ 0.21
PRIM1-201ENST00000338193 TTC5Q8N0Z6 440 aa16.37■□□□□ 0.21
PRIM1-201ENST00000338193 NGEFQ8N5V2 710 aa16.37■□□□□ 0.21
PRIM1-201ENST00000338193 TSPYL6Q8N831 410 aa16.37■□□□□ 0.21
PRIM1-201ENST00000338193 ZBED9Q6R2W3 1325 aa16.36■□□□□ 0.21
PRIM1-201ENST00000338193 GOLGA2Q08379 1002 aa16.36■□□□□ 0.21
PRIM1-201ENST00000338193 ELL2O00472 640 aaPredicted RBP16.35■□□□□ 0.21
PRIM1-201ENST00000338193 PIP4K2AP48426 406 aaPredicted RBP16.35■□□□□ 0.21
PRIM1-201ENST00000338193 CALD1Q05682 793 aaKnown RBP16.35■□□□□ 0.21
PRIM1-201ENST00000338193 ZNF827Q17R98 1081 aa16.35■□□□□ 0.21
PRIM1-201ENST00000338193 TRMT2AQ8IZ69 625 aaKnown RBP16.35■□□□□ 0.21
PRIM1-201ENST00000338193 FMNL2Q96PY5 1086 aa16.35■□□□□ 0.21
PRIM1-201ENST00000338193 BABAM1Q9NWV8 329 aa16.35■□□□□ 0.21
PRIM1-201ENST00000338193 USP16Q9Y5T5 823 aa16.35■□□□□ 0.21
PRIM1-201ENST00000338193 GIGYF1O75420 1035 aaPredicted RBP16.34■□□□□ 0.21
PRIM1-201ENST00000338193 CYP19A1P11511 503 aaPredicted RBP16.33■□□□□ 0.2
PRIM1-201ENST00000338193 EXOSC9Q06265 439 aaKnown RBP16.33■□□□□ 0.2
PRIM1-201ENST00000338193 DUSP27Q5VZP5 1158 aa16.33■□□□□ 0.2
PRIM1-201ENST00000338193 NECTIN2Q92692 538 aa16.33■□□□□ 0.2
PRIM1-201ENST00000338193 SLC27A3Q5K4L6 730 aa16.32■□□□□ 0.2
PRIM1-201ENST00000338193 UBR3Q6ZT12 1888 aa16.32■□□□□ 0.2
PRIM1-201ENST00000338193 E9PSI1 815 aa16.31■□□□□ 0.2
PRIM1-201ENST00000338193 INTS5Q6P9B9 1019 aaKnown RBP16.31■□□□□ 0.2
PRIM1-201ENST00000338193 TCERG1O14776 1098 aaKnown RBP16.3■□□□□ 0.2
PRIM1-201ENST00000338193 A1BGP04217 495 aa16.3■□□□□ 0.2
PRIM1-201ENST00000338193 SNRPA1P09661 255 aaKnown RBP16.3■□□□□ 0.2
PRIM1-201ENST00000338193 CRKLP46109 303 aaKnown RBP16.3■□□□□ 0.2
PRIM1-201ENST00000338193 VSIG10Q8N0Z9 540 aa16.3■□□□□ 0.2
PRIM1-201ENST00000338193 NBPF26B4DH59 902 aa16.29■□□□□ 0.2
PRIM1-201ENST00000338193 ANXA1P04083 346 aa16.29■□□□□ 0.2
PRIM1-201ENST00000338193 NBPF14Q5TI25 921 aa16.29■□□□□ 0.2
PRIM1-201ENST00000338193 NBPF10Q6P3W6 841 aaKnown RBP16.29■□□□□ 0.2
PRIM1-201ENST00000338193 NBPF15Q8N660 670 aa16.29■□□□□ 0.2
PRIM1-201ENST00000338193 MYH16Q9H6N6 1097 aa16.29■□□□□ 0.2
PRIM1-201ENST00000338193 ZBTB1Q9Y2K1 713 aa16.29■□□□□ 0.2
PRIM1-201ENST00000338193 EIF2S2P20042 333 aaKnown RBP16.28■□□□□ 0.2
PRIM1-201ENST00000338193 PROSER3Q2NL68 480 aa16.28■□□□□ 0.2
PRIM1-201ENST00000338193 PDGFDQ9GZP0 370 aaPredicted RBP16.28■□□□□ 0.2
PRIM1-201ENST00000338193 C4AP0C0L4 1744 aa16.28■□□□□ 0.2
PRIM1-201ENST00000338193 PDIA6Q15084 440 aa16.27■□□□□ 0.2
PRIM1-201ENST00000338193 CNTNAP4Q9C0A0 1308 aa16.27■□□□□ 0.19
PRIM1-201ENST00000338193 VAMP4O75379 141 aa16.26■□□□□ 0.19
PRIM1-201ENST00000338193 TWISTNBQ3B726 338 aaPredicted RBP16.26■□□□□ 0.19
PRIM1-201ENST00000338193 QSER1Q2KHR3 1735 aa16.26■□□□□ 0.19
PRIM1-201ENST00000338193 GNPATO15228 680 aa16.26■□□□□ 0.19
PRIM1-201ENST00000338193 CANXP27824 592 aaKnown RBP16.26■□□□□ 0.19
PRIM1-201ENST00000338193 LRP10Q7Z4F1 713 aa16.26■□□□□ 0.19
PRIM1-201ENST00000338193 CCDC87Q9NVE4 849 aa16.26■□□□□ 0.19
PRIM1-201ENST00000338193 PHF14O94880 888 aa16.25■□□□□ 0.19
PRIM1-201ENST00000338193 SLC15A2Q16348 729 aa16.25■□□□□ 0.19
PRIM1-201ENST00000338193 CHPF2Q9P2E5 772 aa16.25■□□□□ 0.19
PRIM1-201ENST00000338193 PNPLA7Q6ZV29 1317 aa16.24■□□□□ 0.19
PRIM1-201ENST00000338193 CASZ1Q86V15 1759 aa16.24■□□□□ 0.19
PRIM1-201ENST00000338193 PSDA5PKW4 1024 aaPredicted RBP16.24■□□□□ 0.19
PRIM1-201ENST00000338193 MYL6BP14649 208 aa16.24■□□□□ 0.19
PRIM1-201ENST00000338193 RC3H1Q5TC82 1133 aaKnown RBP16.24■□□□□ 0.19
PRIM1-201ENST00000338193 HDGFL1Q5TGJ6 251 aa16.24■□□□□ 0.19
PRIM1-201ENST00000338193 SOS1Q07889 1333 aaPredicted RBP16.23■□□□□ 0.19
PRIM1-201ENST00000338193 STARD3NLO95772 234 aa16.23■□□□□ 0.19
PRIM1-201ENST00000338193 R3HDM1Q15032 1099 aaKnown RBP16.23■□□□□ 0.19
PRIM1-201ENST00000338193 AK7Q96M32 723 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms