RNA–Protein interactions for RNA: ENST00000336937.8

ATF3-201, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-201ENST00000336937 RIPK4P57078 832 aa9.08□□□□□ -0.96
ATF3-201ENST00000336937 CCDC27Q2M243 656 aa9.08□□□□□ -0.96
ATF3-201ENST00000336937 MCM10Q7L590 875 aa9.08□□□□□ -0.96
ATF3-201ENST00000336937 COL23A1Q86Y22 540 aaPredicted RBP9.08□□□□□ -0.96
ATF3-201ENST00000336937 ZPR1O75312 459 aa9.07□□□□□ -0.96
ATF3-201ENST00000336937 PHF14O94880 888 aa9.07□□□□□ -0.96
ATF3-201ENST00000336937 ZNF496Q96IT1 587 aaPredicted RBP9.07□□□□□ -0.96
ATF3-201ENST00000336937 SLC4A9Q96Q91 983 aa9.07□□□□□ -0.96
ATF3-201ENST00000336937 MRS2Q9HD23 443 aa9.07□□□□□ -0.96
ATF3-201ENST00000336937 ADAMTS8Q9UP79 889 aa9.07□□□□□ -0.96
ATF3-201ENST00000336937 ZNF652Q9Y2D9 606 aa9.07□□□□□ -0.96
ATF3-201ENST00000336937 CD2APQ9Y5K6 639 aa9.07□□□□□ -0.96
ATF3-201ENST00000336937 NRXN2Q9P2S2 1712 aa9.07□□□□□ -0.96
ATF3-201ENST00000336937 KCNQ4P56696 695 aa9.06□□□□□ -0.96
ATF3-201ENST00000336937 SLC39A6Q13433 755 aa9.06□□□□□ -0.96
ATF3-201ENST00000336937 DNAJC10Q8IXB1 793 aa9.06□□□□□ -0.96
ATF3-201ENST00000336937 TSPYL4Q9UJ04 414 aa9.06□□□□□ -0.96
ATF3-201ENST00000336937 C10orf71Q711Q0 1435 aa9.05□□□□□ -0.96
ATF3-201ENST00000336937 INTS5Q6P9B9 1019 aaKnown RBP9.05□□□□□ -0.96
ATF3-201ENST00000336937 ARHGEF1Q92888 912 aaKnown RBP9.05□□□□□ -0.96
ATF3-201ENST00000336937 IFT57Q9NWB7 429 aa9.05□□□□□ -0.96
ATF3-201ENST00000336937 NARFQ9UHQ1 456 aa9.05□□□□□ -0.96
ATF3-201ENST00000336937 PDZRN3Q9UPQ7 1066 aa9.05□□□□□ -0.96
ATF3-201ENST00000336937 IL16Q14005 1332 aa9.05□□□□□ -0.96
ATF3-201ENST00000336937 DLEC1Q9Y238 1755 aa9.04□□□□□ -0.96
ATF3-201ENST00000336937 CARMIL3Q8ND23 1372 aa9.04□□□□□ -0.96
ATF3-201ENST00000336937 GYS1P13807 737 aa9.04□□□□□ -0.96
ATF3-201ENST00000336937 EIF5P55010 431 aaKnown RBP9.04□□□□□ -0.96
ATF3-201ENST00000336937 GNAI1P63096 354 aa9.04□□□□□ -0.96
ATF3-201ENST00000336937 CLEC4GQ6UXB4 293 aa9.04□□□□□ -0.96
ATF3-201ENST00000336937 CFAP44Q96MT7 982 aa9.04□□□□□ -0.96
ATF3-201ENST00000336937 FHDC1Q9C0D6 1143 aaPredicted RBP9.04□□□□□ -0.96
ATF3-201ENST00000336937 PDGFDQ9GZP0 370 aaPredicted RBP9.04□□□□□ -0.96
ATF3-201ENST00000336937 ATF5Q9Y2D1 282 aaPredicted RBP9.04□□□□□ -0.96
ATF3-201ENST00000336937 ZBTB1Q9Y2K1 713 aa9.04□□□□□ -0.96
ATF3-201ENST00000336937 PARP3Q9Y6F1 533 aa9.04□□□□□ -0.96
ATF3-201ENST00000336937 CACNA1FO60840 1977 aa9.04□□□□□ -0.96
ATF3-201ENST00000336937 CHD4Q14839 1912 aa9.03□□□□□ -0.96
ATF3-201ENST00000336937 IBTKQ9P2D0 1353 aaPredicted RBP9.03□□□□□ -0.96
ATF3-201ENST00000336937 BRCA1P38398 1863 aaKnown RBP9.03□□□□□ -0.96
ATF3-201ENST00000336937 CCER2I3L3R5 266 aa9.03□□□□□ -0.96
ATF3-201ENST00000336937 GIGYF1O75420 1035 aaPredicted RBP9.03□□□□□ -0.96
ATF3-201ENST00000336937 EIF4A1P60842 406 aaKnown RBP9.03□□□□□ -0.96
ATF3-201ENST00000336937 TGFB2P61812 414 aa9.03□□□□□ -0.96
ATF3-201ENST00000336937 SYT17Q9BSW7 474 aa9.03□□□□□ -0.96
ATF3-201ENST00000336937 ANKRD36CQ5JPF3 1778 aa9.02□□□□□ -0.97
ATF3-201ENST00000336937 MMP10P09238 476 aa9.02□□□□□ -0.97
ATF3-201ENST00000336937 DCTN1Q14203 1278 aa9.02□□□□□ -0.97
ATF3-201ENST00000336937 ARFGEF1Q9Y6D6 1849 aa9.02□□□□□ -0.97
ATF3-201ENST00000336937 ATP10DQ9P241 1426 aa9.02□□□□□ -0.97
ATF3-201ENST00000336937 RNF123Q5XPI4 1314 aa9.02□□□□□ -0.97
ATF3-201ENST00000336937 AFDNP55196 1824 aaKnown RBP9.01□□□□□ -0.97
ATF3-201ENST00000336937 CHL1O00533 1208 aa9.01□□□□□ -0.97
ATF3-201ENST00000336937 APAF1O14727 1248 aa9.01□□□□□ -0.97
ATF3-201ENST00000336937 GRIN3BO60391 1043 aa9.01□□□□□ -0.97
ATF3-201ENST00000336937 RIC1Q4ADV7 1423 aa9.01□□□□□ -0.97
ATF3-201ENST00000336937 KIF6Q6ZMV9 814 aa9.01□□□□□ -0.97
ATF3-201ENST00000336937 CCDC146Q8IYE0 955 aa9.01□□□□□ -0.97
ATF3-201ENST00000336937 KIAA1551Q9HCM1 1747 aa9.01□□□□□ -0.97
ATF3-201ENST00000336937 TRIM35Q9UPQ4 493 aa9.01□□□□□ -0.97
ATF3-201ENST00000336937 UTRNP46939 3433 aa9.01□□□□□ -0.97
ATF3-201ENST00000336937 ARFGEF2Q9Y6D5 1785 aa9.01□□□□□ -0.97
ATF3-201ENST00000336937 PXDNLA1KZ92 1463 aa9.01□□□□□ -0.97
ATF3-201ENST00000336937 GOLGB1Q14789 3259 aaKnown RBP9□□□□□ -0.97
ATF3-201ENST00000336937 ERVV-1B6SEH8 477 aa9□□□□□ -0.97
ATF3-201ENST00000336937 CANXP27824 592 aaKnown RBP9□□□□□ -0.97
ATF3-201ENST00000336937 HSP90AB3PQ58FF7 597 aa9□□□□□ -0.97
ATF3-201ENST00000336937 USPL1Q5W0Q7 1092 aa9□□□□□ -0.97
ATF3-201ENST00000336937 MSL1Q68DK7 614 aa9□□□□□ -0.97
ATF3-201ENST00000336937 AMIGO3Q86WK7 504 aa9□□□□□ -0.97
ATF3-201ENST00000336937 DZIP3Q86Y13 1208 aaKnown RBP9□□□□□ -0.97
ATF3-201ENST00000336937 NUP98P52948 1817 aa8.99□□□□□ -0.97
ATF3-201ENST00000336937 POLRMTO00411 1230 aaKnown RBP8.99□□□□□ -0.97
ATF3-201ENST00000336937 ZNF853P0CG23 659 aa8.99□□□□□ -0.97
ATF3-201ENST00000336937 NEUROD2Q15784 382 aa8.99□□□□□ -0.97
ATF3-201ENST00000336937 WDR63Q8IWG1 891 aa8.99□□□□□ -0.97
ATF3-201ENST00000336937 NYXQ9GZU5 481 aa8.99□□□□□ -0.97
ATF3-201ENST00000336937 DBF4Q9UBU7 674 aaPredicted RBP8.99□□□□□ -0.97
ATF3-201ENST00000336937 TM4SF1P30408 202 aa8.98□□□□□ -0.97
ATF3-201ENST00000336937 ST5P78524 1137 aa8.98□□□□□ -0.97
ATF3-201ENST00000336937 SETDB2Q96T68 719 aa8.98□□□□□ -0.97
ATF3-201ENST00000336937 THUMPD2Q9BTF0 503 aaKnown RBP8.98□□□□□ -0.97
ATF3-201ENST00000336937 MYH16Q9H6N6 1097 aa8.98□□□□□ -0.97
ATF3-201ENST00000336937 RRP7AQ9Y3A4 280 aaKnown RBP8.98□□□□□ -0.97
ATF3-201ENST00000336937 USP16Q9Y5T5 823 aa8.98□□□□□ -0.97
ATF3-201ENST00000336937 MAP3K15Q6ZN16 1313 aa8.98□□□□□ -0.97
ATF3-201ENST00000336937 NPHP1O15259 732 aa8.97□□□□□ -0.97
ATF3-201ENST00000336937 KCNQ3O43525 872 aa8.97□□□□□ -0.97
ATF3-201ENST00000336937 CAMTA2O94983 1202 aa8.97□□□□□ -0.97
ATF3-201ENST00000336937 A1BGP04217 495 aa8.97□□□□□ -0.97
ATF3-201ENST00000336937 PDE6BP35913 854 aa8.97□□□□□ -0.97
ATF3-201ENST00000336937 FKBP8Q14318 412 aa8.97□□□□□ -0.97
ATF3-201ENST00000336937 PARP10Q53GL7 1025 aa8.97□□□□□ -0.97
ATF3-201ENST00000336937 HDGFL1Q5TGJ6 251 aa8.97□□□□□ -0.97
ATF3-201ENST00000336937 WWC1Q8IX03 1113 aa8.97□□□□□ -0.97
ATF3-201ENST00000336937 CNBD1Q8NA66 436 aa8.97□□□□□ -0.97
ATF3-201ENST00000336937 DDX21Q9NR30 783 aaKnown RBP eCLIP8.97□□□□□ -0.97
ATF3-201ENST00000336937 HYPKQ9NX55 129 aa8.97□□□□□ -0.97
ATF3-201ENST00000336937 ZNF330Q9Y3S2 320 aaPredicted RBP8.97□□□□□ -0.97
ATF3-201ENST00000336937 LAMB2P55268 1798 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms