RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 AKAP4Q5JQC9 854 aa28.5■■■□□ 2.15
NDEL1-201ENST00000334527 PI4KAP1Q8N8J0 262 aa28.5■■■□□ 2.15
NDEL1-201ENST00000334527 DNAAF4Q8WXU2 420 aa28.5■■■□□ 2.15
NDEL1-201ENST00000334527 LMO7Q8WWI1 1683 aa28.5■■■□□ 2.15
NDEL1-201ENST00000334527 CHMP4AQ9BY43 222 aa28.5■■■□□ 2.15
NDEL1-201ENST00000334527 BTBD11A6QL63 1104 aa28.49■■■□□ 2.15
NDEL1-201ENST00000334527 BEND3Q5T5X7 828 aa28.49■■■□□ 2.15
NDEL1-201ENST00000334527 RHPN1Q8TCX5 695 aa28.49■■■□□ 2.15
NDEL1-201ENST00000334527 ADGRL3Q9HAR2 1447 aa28.49■■■□□ 2.15
NDEL1-201ENST00000334527 MPRIPQ6WCQ1 1025 aa28.48■■■□□ 2.15
NDEL1-201ENST00000334527 PHRF1Q9P1Y6 1649 aaKnown RBP28.48■■■□□ 2.15
NDEL1-201ENST00000334527 NCLP19338 710 aaKnown RBP28.47■■■□□ 2.15
NDEL1-201ENST00000334527 PLEKHO1Q53GL0 409 aaPredicted RBP28.47■■■□□ 2.15
NDEL1-201ENST00000334527 ANXA1P04083 346 aa28.47■■■□□ 2.15
NDEL1-201ENST00000334527 KIF1BPQ96EK5 621 aa28.46■■■□□ 2.15
NDEL1-201ENST00000334527 MAP4K4O95819 1239 aaPredicted RBP28.45■■■□□ 2.15
NDEL1-201ENST00000334527 CAVIN1Q6NZI2 390 aaKnown RBP28.45■■■□□ 2.15
NDEL1-201ENST00000334527 IL25Q9H293 177 aa28.45■■■□□ 2.14
NDEL1-201ENST00000334527 PRPF40AO75400 957 aaKnown RBP28.44■■■□□ 2.14
NDEL1-201ENST00000334527 PLEKHG5O94827 1062 aa28.44■■■□□ 2.14
NDEL1-201ENST00000334527 PI4K2BQ8TCG2 481 aa28.44■■■□□ 2.14
NDEL1-201ENST00000334527 CUL4AQ13619 759 aa28.44■■■□□ 2.14
NDEL1-201ENST00000334527 ADCY9O60503 1353 aa28.43■■■□□ 2.14
NDEL1-201ENST00000334527 NOL8Q76FK4 1167 aaKnown RBP28.43■■■□□ 2.14
NDEL1-201ENST00000334527 AMOTQ4VCS5 1084 aa28.43■■■□□ 2.14
NDEL1-201ENST00000334527 IL17RAQ96F46 866 aa28.43■■■□□ 2.14
NDEL1-201ENST00000334527 C1orf141Q5JVX7 400 aa28.42■■■□□ 2.14
NDEL1-201ENST00000334527 GCP02774 474 aa28.42■■■□□ 2.14
NDEL1-201ENST00000334527 ZNF445P59923 1031 aa28.42■■■□□ 2.14
NDEL1-201ENST00000334527 FOXD4L5Q5VV16 416 aaPredicted RBP28.42■■■□□ 2.14
NDEL1-201ENST00000334527 FOXD4L4Q8WXT5 416 aaPredicted RBP28.42■■■□□ 2.14
NDEL1-201ENST00000334527 PXDNQ92626 1479 aa28.41■■■□□ 2.14
NDEL1-201ENST00000334527 RNMTO43148 476 aaKnown RBP28.41■■■□□ 2.14
NDEL1-201ENST00000334527 NASPP49321 788 aaPredicted RBP28.41■■■□□ 2.14
NDEL1-201ENST00000334527 XPCQ01831 940 aaPredicted RBP28.41■■■□□ 2.14
NDEL1-201ENST00000334527 ZSCAN23Q3MJ62 389 aa28.41■■■□□ 2.14
NDEL1-201ENST00000334527 TRIM44Q96DX7 344 aaPredicted RBP28.41■■■□□ 2.14
NDEL1-201ENST00000334527 UPF3BQ9BZI7 483 aaKnown RBP28.41■■■□□ 2.14
NDEL1-201ENST00000334527 DBF4Q9UBU7 674 aaPredicted RBP28.41■■■□□ 2.14
NDEL1-201ENST00000334527 CLCN1P35523 988 aa28.4■■■□□ 2.14
NDEL1-201ENST00000334527 ZNF142P52746 1687 aaPredicted RBP28.4■■■□□ 2.14
NDEL1-201ENST00000334527 EPB41L2O43491 1005 aaKnown RBP28.4■■■□□ 2.14
NDEL1-201ENST00000334527 HSP90AB4PQ58FF6 505 aa28.4■■■□□ 2.14
NDEL1-201ENST00000334527 ARHGEF25Q86VW2 580 aa28.4■■■□□ 2.14
NDEL1-201ENST00000334527 CHAMP1Q96JM3 812 aa28.4■■■□□ 2.14
NDEL1-201ENST00000334527 ORAI2Q96SN7 254 aa28.39■■■□□ 2.14
NDEL1-201ENST00000334527 NCAPD2Q15021 1401 aa28.39■■■□□ 2.14
NDEL1-201ENST00000334527 HSPA4P34932 840 aa28.39■■■□□ 2.14
NDEL1-201ENST00000334527 INTS4Q96HW7 963 aaKnown RBP28.39■■■□□ 2.14
NDEL1-201ENST00000334527 GPT2Q8TD30 523 aa28.38■■■□□ 2.13
NDEL1-201ENST00000334527 CNTROBQ8N137 903 aa28.38■■■□□ 2.13
NDEL1-201ENST00000334527 LMOD2Q6P5Q4 547 aa28.37■■■□□ 2.13
NDEL1-201ENST00000334527 ANKRD24Q8TF21 1146 aa28.37■■■□□ 2.13
NDEL1-201ENST00000334527 OS9Q13438 667 aaPredicted RBP28.37■■■□□ 2.13
NDEL1-201ENST00000334527 ESPNB1AK53 854 aa28.36■■■□□ 2.13
NDEL1-201ENST00000334527 SGSM2O43147 1006 aa28.36■■■□□ 2.13
NDEL1-201ENST00000334527 BRD1O95696 1058 aa28.36■■■□□ 2.13
NDEL1-201ENST00000334527 MAP3K2Q9Y2U5 619 aa28.36■■■□□ 2.13
NDEL1-201ENST00000334527 SLIT3O75094 1523 aa28.36■■■□□ 2.13
NDEL1-201ENST00000334527 GIGYF1O75420 1035 aaPredicted RBP28.35■■■□□ 2.13
NDEL1-201ENST00000334527 TRHP20396 242 aaPredicted RBP28.35■■■□□ 2.13
NDEL1-201ENST00000334527 CCDC173Q0VFZ6 552 aa28.35■■■□□ 2.13
NDEL1-201ENST00000334527 OVOS2A0A0G2JMS6 1433 aa28.35■■■□□ 2.13
NDEL1-201ENST00000334527 PROSER3Q2NL68 480 aa28.35■■■□□ 2.13
NDEL1-201ENST00000334527 RAD50Q92878 1312 aa28.35■■■□□ 2.13
NDEL1-201ENST00000334527 C9orf78Q9NZ63 289 aaPredicted RBP28.34■■■□□ 2.13
NDEL1-201ENST00000334527 RBM27Q9P2N5 1060 aaKnown RBP28.34■■■□□ 2.13
NDEL1-201ENST00000334527 ERBB4Q15303 1308 aa28.34■■■□□ 2.13
NDEL1-201ENST00000334527 MTX1Q13505 466 aa28.33■■■□□ 2.13
NDEL1-201ENST00000334527 ANP32BQ92688 251 aaKnown RBP28.33■■■□□ 2.13
NDEL1-201ENST00000334527 USP42Q9H9J4 1324 aaKnown RBP28.32■■■□□ 2.12
NDEL1-201ENST00000334527 ALDH1L1O75891 902 aa28.32■■■□□ 2.12
NDEL1-201ENST00000334527 KSR2Q6VAB6 950 aa28.32■■■□□ 2.12
NDEL1-201ENST00000334527 PPP1R9BQ96SB3 815 aa28.32■■■□□ 2.12
NDEL1-201ENST00000334527 TTC41PQ6P2S7 1318 aa28.31■■■□□ 2.12
NDEL1-201ENST00000334527 PRAMEF22A3QJZ6 481 aa28.31■■■□□ 2.12
NDEL1-201ENST00000334527 HEG1Q9ULI3 1381 aa28.31■■■□□ 2.12
NDEL1-201ENST00000334527 LSG1Q9H089 658 aaKnown RBP28.31■■■□□ 2.12
NDEL1-201ENST00000334527 CRYBG1Q9Y4K1 1723 aa28.3■■■□□ 2.12
NDEL1-201ENST00000334527 GLRX3O76003 335 aaKnown RBP28.3■■■□□ 2.12
NDEL1-201ENST00000334527 CWC27Q6UX04 472 aaKnown RBP28.3■■■□□ 2.12
NDEL1-201ENST00000334527 CLASRPQ8N2M8 674 aaKnown RBP28.3■■■□□ 2.12
NDEL1-201ENST00000334527 AXIN2Q9Y2T1 843 aa28.3■■■□□ 2.12
NDEL1-201ENST00000334527 CWF19L2Q2TBE0 894 aaKnown RBP28.3■■■□□ 2.12
NDEL1-201ENST00000334527 SNX14Q9Y5W7 946 aa28.3■■■□□ 2.12
NDEL1-201ENST00000334527 NPHP4O75161 1426 aaPredicted RBP28.29■■■□□ 2.12
NDEL1-201ENST00000334527 KIAA1211Q6ZU35 1233 aa28.29■■■□□ 2.12
NDEL1-201ENST00000334527 CAMTA1Q9Y6Y1 1673 aa28.29■■■□□ 2.12
NDEL1-201ENST00000334527 TMEM63CQ9P1W3 806 aa28.28■■■□□ 2.12
NDEL1-201ENST00000334527 NSFL1CQ9UNZ2 370 aaKnown RBP28.28■■■□□ 2.12
NDEL1-201ENST00000334527 PRIM1P49642 420 aaKnown RBP28.28■■■□□ 2.12
NDEL1-201ENST00000334527 HYPKQ9NX55 129 aa28.28■■■□□ 2.12
NDEL1-201ENST00000334527 RBSNQ9H1K0 784 aa28.27■■■□□ 2.12
NDEL1-201ENST00000334527 PA2G4Q9UQ80 394 aaKnown RBP28.27■■■□□ 2.12
NDEL1-201ENST00000334527 SIPA1L3O60292 1781 aaPredicted RBP28.27■■■□□ 2.12
NDEL1-201ENST00000334527 SPG7Q9UQ90 795 aa28.26■■■□□ 2.12
NDEL1-201ENST00000334527 HDAC5Q9UQL6 1122 aa28.26■■■□□ 2.12
NDEL1-201ENST00000334527 MBD3O95983 291 aa28.26■■■□□ 2.11
NDEL1-201ENST00000334527 ERC1Q8IUD2 1116 aa28.25■■■□□ 2.11
NDEL1-201ENST00000334527 DIAPH3Q9NSV4 1193 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms