RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 CLEC4GQ6UXB4 293 aa8.62□□□□□ -1.03
USP16-201ENST00000334352 AEBP1Q8IUX7 1158 aa8.62□□□□□ -1.03
USP16-201ENST00000334352 PNISRQ8TF01 805 aaKnown RBP8.62□□□□□ -1.03
USP16-201ENST00000334352 LRRC37AA6NMS7 1700 aa8.62□□□□□ -1.03
USP16-201ENST00000334352 GPR162Q16538 588 aa8.62□□□□□ -1.03
USP16-201ENST00000334352 PARP3Q9Y6F1 533 aa8.62□□□□□ -1.03
USP16-201ENST00000334352 GRIPAP1Q4V328 841 aa8.61□□□□□ -1.03
USP16-201ENST00000334352 SCN4AP35499 1836 aa8.61□□□□□ -1.03
USP16-201ENST00000334352 THSD7BQ9C0I4 1608 aa8.6□□□□□ -1.03
USP16-201ENST00000334352 NFATC2IPQ8NCF5 419 aa8.6□□□□□ -1.03
USP16-201ENST00000334352 NUDCQ9Y266 331 aa8.6□□□□□ -1.03
USP16-201ENST00000334352 RNF123Q5XPI4 1314 aa8.6□□□□□ -1.03
USP16-201ENST00000334352 SNED1Q8TER0 1413 aa8.6□□□□□ -1.03
USP16-201ENST00000334352 PPP2R1AP30153 589 aa8.6□□□□□ -1.03
USP16-201ENST00000334352 RFC4P35249 363 aa8.6□□□□□ -1.03
USP16-201ENST00000334352 STARD3NLO95772 234 aa8.59□□□□□ -1.03
USP16-201ENST00000334352 MMP10P09238 476 aa8.59□□□□□ -1.03
USP16-201ENST00000334352 FSTL1Q12841 308 aa8.59□□□□□ -1.03
USP16-201ENST00000334352 STYK1Q6J9G0 422 aa8.59□□□□□ -1.03
USP16-201ENST00000334352 RBM46Q8TBY0 533 aaKnown RBP8.59□□□□□ -1.03
USP16-201ENST00000334352 BCL2L12Q9HB09 334 aa8.59□□□□□ -1.03
USP16-201ENST00000334352 CARMIL3Q8ND23 1372 aa8.59□□□□□ -1.03
USP16-201ENST00000334352 RALBP1Q15311 655 aa8.59□□□□□ -1.03
USP16-201ENST00000334352 IL17REQ8NFR9 667 aa8.59□□□□□ -1.03
USP16-201ENST00000334352 PLEKHF1Q96S99 279 aa8.59□□□□□ -1.03
USP16-201ENST00000334352 NUP98P52948 1817 aa8.59□□□□□ -1.03
USP16-201ENST00000334352 DDR1Q08345 913 aa8.59□□□□□ -1.04
USP16-201ENST00000334352 ZNF790Q6PG37 636 aa8.59□□□□□ -1.04
USP16-201ENST00000334352 FMNL2Q96PY5 1086 aa8.59□□□□□ -1.04
USP16-201ENST00000334352 PCGF6Q9BYE7 350 aa8.59□□□□□ -1.04
USP16-201ENST00000334352 DDX60Q8IY21 1712 aaKnown RBP8.58□□□□□ -1.04
USP16-201ENST00000334352 GIGYF1O75420 1035 aaPredicted RBP8.58□□□□□ -1.04
USP16-201ENST00000334352 SOGA3Q5TF21 947 aa8.58□□□□□ -1.04
USP16-201ENST00000334352 PIM2Q9P1W9 311 aa8.58□□□□□ -1.04
USP16-201ENST00000334352 PPM1GO15355 546 aaPredicted RBP8.58□□□□□ -1.04
USP16-201ENST00000334352 VPS33BQ9H267 617 aa8.58□□□□□ -1.04
USP16-201ENST00000334352 LGR6Q9HBX8 967 aa8.58□□□□□ -1.04
USP16-201ENST00000334352 ERVV-1B6SEH8 477 aa8.57□□□□□ -1.04
USP16-201ENST00000334352 KCNQ4P56696 695 aa8.57□□□□□ -1.04
USP16-201ENST00000334352 BRIP1Q9BX63 1249 aa8.57□□□□□ -1.04
USP16-201ENST00000334352 KIF3CO14782 793 aa8.56□□□□□ -1.04
USP16-201ENST00000334352 DNAJC10Q8IXB1 793 aa8.56□□□□□ -1.04
USP16-201ENST00000334352 ZNF609O15014 1411 aa8.56□□□□□ -1.04
USP16-201ENST00000334352 CAMTA2O94983 1202 aa8.56□□□□□ -1.04
USP16-201ENST00000334352 DALRD3Q5D0E6 543 aaKnown RBP8.56□□□□□ -1.04
USP16-201ENST00000334352 ZPR1O75312 459 aa8.55□□□□□ -1.04
USP16-201ENST00000334352 DPEP1P16444 411 aa8.55□□□□□ -1.04
USP16-201ENST00000334352 PDE6BP35913 854 aa8.55□□□□□ -1.04
USP16-201ENST00000334352 RBM42Q9BTD8 480 aaKnown RBP8.55□□□□□ -1.04
USP16-201ENST00000334352 DUOX1Q9NRD9 1551 aa8.55□□□□□ -1.04
USP16-201ENST00000334352 HOXB7P09629 217 aa8.55□□□□□ -1.04
USP16-201ENST00000334352 FKBP8Q14318 412 aa8.55□□□□□ -1.04
USP16-201ENST00000334352 SNRPA1P09661 255 aaKnown RBP8.54□□□□□ -1.04
USP16-201ENST00000334352 NFIXQ14938 502 aa8.54□□□□□ -1.04
USP16-201ENST00000334352 HSPA6P17066 643 aa8.54□□□□□ -1.04
USP16-201ENST00000334352 APLP1P51693 650 aa8.54□□□□□ -1.04
USP16-201ENST00000334352 MSL1Q68DK7 614 aa8.54□□□□□ -1.04
USP16-201ENST00000334352 LTBP1Q14766 1721 aa8.54□□□□□ -1.04
USP16-201ENST00000334352 CCDC88AQ3V6T2 1871 aa8.54□□□□□ -1.04
USP16-201ENST00000334352 TAF7Q15545 349 aaPredicted RBP8.54□□□□□ -1.04
USP16-201ENST00000334352 TTC5Q8N0Z6 440 aa8.54□□□□□ -1.04
USP16-201ENST00000334352 NFE2L2Q16236 605 aa8.53□□□□□ -1.04
USP16-201ENST00000334352 CC2D2BQ6DHV5 1058 aa8.53□□□□□ -1.04
USP16-201ENST00000334352 KDM2BQ8NHM5 1336 aa8.53□□□□□ -1.04
USP16-201ENST00000334352 MSH5O43196 834 aa8.53□□□□□ -1.04
USP16-201ENST00000334352 TOMM70O94826 608 aa8.53□□□□□ -1.04
USP16-201ENST00000334352 TEFQ10587 303 aa8.53□□□□□ -1.04
USP16-201ENST00000334352 C7orf43Q8WVR3 580 aa8.53□□□□□ -1.04
USP16-201ENST00000334352 ZBTB1Q9Y2K1 713 aa8.53□□□□□ -1.04
USP16-201ENST00000334352 PHF14O94880 888 aa8.52□□□□□ -1.05
USP16-201ENST00000334352 SERPINB2P05120 415 aa8.52□□□□□ -1.05
USP16-201ENST00000334352 LMOD3Q0VAK6 560 aa8.52□□□□□ -1.05
USP16-201ENST00000334352 USPL1Q5W0Q7 1092 aa8.52□□□□□ -1.05
USP16-201ENST00000334352 JMYQ8N9B5 988 aa8.52□□□□□ -1.05
USP16-201ENST00000334352 ZNF496Q96IT1 587 aaPredicted RBP8.52□□□□□ -1.05
USP16-201ENST00000334352 ZNF652Q9Y2D9 606 aa8.52□□□□□ -1.05
USP16-201ENST00000334352 HOXA10P31260 410 aaPredicted RBP8.52□□□□□ -1.05
USP16-201ENST00000334352 TNNT2P45379 298 aaPredicted RBP8.52□□□□□ -1.05
USP16-201ENST00000334352 SLC10A5Q5PT55 438 aa8.52□□□□□ -1.05
USP16-201ENST00000334352 CNKSR1Q969H4 720 aa8.52□□□□□ -1.05
USP16-201ENST00000334352 PSME4Q14997 1843 aa8.52□□□□□ -1.05
USP16-201ENST00000334352 PRKAR2BP31323 418 aa8.51□□□□□ -1.05
USP16-201ENST00000334352 CRY2Q49AN0 593 aa8.51□□□□□ -1.05
USP16-201ENST00000334352 L3MBTL3Q96JM7 780 aaPredicted RBP8.51□□□□□ -1.05
USP16-201ENST00000334352 LAMB1P07942 1786 aa8.51□□□□□ -1.05
USP16-201ENST00000334352 SLX4Q8IY92 1834 aa8.51□□□□□ -1.05
USP16-201ENST00000334352 BTBD11A6QL63 1104 aa8.51□□□□□ -1.05
USP16-201ENST00000334352 LMNB1P20700 586 aa8.51□□□□□ -1.05
USP16-201ENST00000334352 TTLL6Q8N841 843 aa8.51□□□□□ -1.05
USP16-201ENST00000334352 PHACTR3Q96KR7 559 aa8.51□□□□□ -1.05
USP16-201ENST00000334352 LRP10Q7Z4F1 713 aa8.51□□□□□ -1.05
USP16-201ENST00000334352 SRP68Q9UHB9 627 aaKnown RBP8.51□□□□□ -1.05
USP16-201ENST00000334352 HMOX1P09601 288 aa8.5□□□□□ -1.05
USP16-201ENST00000334352 CC2D1BQ5T0F9 858 aaKnown RBP8.5□□□□□ -1.05
USP16-201ENST00000334352 MASTLQ96GX5 879 aa8.5□□□□□ -1.05
USP16-201ENST00000334352 NYXQ9GZU5 481 aa8.5□□□□□ -1.05
USP16-201ENST00000334352 GPBP1L1Q9HC44 474 aaPredicted RBP8.5□□□□□ -1.05
USP16-201ENST00000334352 CACNA1FO60840 1977 aa8.5□□□□□ -1.05
USP16-201ENST00000334352 H0YIN7 160 aa8.5□□□□□ -1.05
USP16-201ENST00000334352 NPR1P16066 1061 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms