RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 WASLO00401 505 aaPredicted RBP14.13□□□□□ -0.15
LIMK2-202ENST00000333611 TRMT1Q9NXH9 659 aaKnown RBP14.13□□□□□ -0.15
LIMK2-202ENST00000333611 CFAP74Q9C0B2 1584 aa14.13□□□□□ -0.15
LIMK2-202ENST00000333611 MYO3AQ8NEV4 1616 aa14.13□□□□□ -0.15
LIMK2-202ENST00000333611 GIMAP6Q6P9H5 292 aa14.13□□□□□ -0.15
LIMK2-202ENST00000333611 PTCH1Q13635 1447 aa14.13□□□□□ -0.15
LIMK2-202ENST00000333611 PRR29P0C7W0 189 aa14.13□□□□□ -0.15
LIMK2-202ENST00000333611 OS9Q13438 667 aaPredicted RBP14.13□□□□□ -0.15
LIMK2-202ENST00000333611 GNAI2P04899 355 aa14.12□□□□□ -0.15
LIMK2-202ENST00000333611 EIF2S2P20042 333 aaKnown RBP14.12□□□□□ -0.15
LIMK2-202ENST00000333611 SYTL4Q96C24 671 aaPredicted RBP14.12□□□□□ -0.15
LIMK2-202ENST00000333611 LRRCC1Q9C099 1032 aa14.12□□□□□ -0.15
LIMK2-202ENST00000333611 LRMPQ12912 555 aa14.12□□□□□ -0.15
LIMK2-202ENST00000333611 RTL1A6NKG5 1358 aa14.12□□□□□ -0.15
LIMK2-202ENST00000333611 PNPLA6Q8IY17 1366 aa14.12□□□□□ -0.15
LIMK2-202ENST00000333611 MX1P20591 662 aa14.11□□□□□ -0.15
LIMK2-202ENST00000333611 CCDC61Q9Y6R9 512 aa14.11□□□□□ -0.15
LIMK2-202ENST00000333611 ZFYVE9O95405 1425 aa14.11□□□□□ -0.15
LIMK2-202ENST00000333611 BRPF1P55201 1214 aaPredicted RBP14.11□□□□□ -0.15
LIMK2-202ENST00000333611 ABCC3O15438 1527 aa14.11□□□□□ -0.15
LIMK2-202ENST00000333611 PPLO60437 1756 aa14.11□□□□□ -0.15
LIMK2-202ENST00000333611 ZC3H13Q5T200 1668 aaKnown RBP14.11□□□□□ -0.15
LIMK2-202ENST00000333611 PNMA6EA0A0J9YXQ4 647 aa14.11□□□□□ -0.15
LIMK2-202ENST00000333611 FBXW7Q969H0 707 aa14.11□□□□□ -0.15
LIMK2-202ENST00000333611 LRRFIP2Q9Y608 721 aaKnown RBP14.11□□□□□ -0.15
LIMK2-202ENST00000333611 MED14O60244 1454 aa14.1□□□□□ -0.15
LIMK2-202ENST00000333611 CD163L1Q9NR16 1453 aa14.1□□□□□ -0.15
LIMK2-202ENST00000333611 CPA1P15085 419 aa14.1□□□□□ -0.15
LIMK2-202ENST00000333611 AMPHP49418 695 aa14.1□□□□□ -0.15
LIMK2-202ENST00000333611 UNC5CLQ8IV45 518 aa14.1□□□□□ -0.15
LIMK2-202ENST00000333611 ESYT1Q9BSJ8 1104 aa14.1□□□□□ -0.15
LIMK2-202ENST00000333611 CTNNA3Q9UI47 895 aa14.1□□□□□ -0.15
LIMK2-202ENST00000333611 TRIM66O15016 1216 aa14.1□□□□□ -0.15
LIMK2-202ENST00000333611 TRIM5Q9C035 493 aa14.1□□□□□ -0.15
LIMK2-202ENST00000333611 RASSF4Q9H2L5 321 aa14.1□□□□□ -0.15
LIMK2-202ENST00000333611 SURF6O75683 361 aaKnown RBP14.1□□□□□ -0.15
LIMK2-202ENST00000333611 ELF2Q15723 593 aa14.1□□□□□ -0.15
LIMK2-202ENST00000333611 IFT172Q9UG01 1749 aa14.09□□□□□ -0.15
LIMK2-202ENST00000333611 CYP2E1P05181 493 aaPredicted RBP14.09□□□□□ -0.15
LIMK2-202ENST00000333611 KRBA2Q6ZNG9 492 aa14.09□□□□□ -0.15
LIMK2-202ENST00000333611 CCDC186Q7Z3E2 898 aa14.09□□□□□ -0.15
LIMK2-202ENST00000333611 RAD51AP2Q09MP3 1159 aa14.09□□□□□ -0.15
LIMK2-202ENST00000333611 FEZ2Q9UHY8 353 aaPredicted RBP14.09□□□□□ -0.15
LIMK2-202ENST00000333611 ABCA9Q8IUA7 1624 aa14.09□□□□□ -0.15
LIMK2-202ENST00000333611 ARHGEF28Q8N1W1 1705 aaKnown RBP14.09□□□□□ -0.15
LIMK2-202ENST00000333611 IBSPP21815 317 aaPredicted RBP14.09□□□□□ -0.15
LIMK2-202ENST00000333611 SART3Q15020 963 aaKnown RBP14.09□□□□□ -0.15
LIMK2-202ENST00000333611 USP48Q86UV5 1035 aa14.09□□□□□ -0.15
LIMK2-202ENST00000333611 YEATS2Q9ULM3 1422 aa14.08□□□□□ -0.15
LIMK2-202ENST00000333611 E2F4Q16254 413 aa14.08□□□□□ -0.16
LIMK2-202ENST00000333611 CAMK4Q16566 473 aa14.08□□□□□ -0.16
LIMK2-202ENST00000333611 TEX35Q5T0J7 233 aa14.08□□□□□ -0.16
LIMK2-202ENST00000333611 CCDC191Q8NCU4 936 aa14.08□□□□□ -0.16
LIMK2-202ENST00000333611 CNPY2Q9Y2B0 182 aa14.08□□□□□ -0.16
LIMK2-202ENST00000333611 VPS37CA5D8V6 355 aaPredicted RBP14.08□□□□□ -0.16
LIMK2-202ENST00000333611 BANK1Q8NDB2 785 aa14.08□□□□□ -0.16
LIMK2-202ENST00000333611 CHL1O00533 1208 aa14.07□□□□□ -0.16
LIMK2-202ENST00000333611 TTLL5Q6EMB2 1281 aa14.07□□□□□ -0.16
LIMK2-202ENST00000333611 SPG7Q9UQ90 795 aa14.07□□□□□ -0.16
LIMK2-202ENST00000333611 NEXMIFQ5QGS0 1516 aa14.07□□□□□ -0.16
LIMK2-202ENST00000333611 ARAP3Q8WWN8 1544 aa14.07□□□□□ -0.16
LIMK2-202ENST00000333611 PTPRMP28827 1452 aa14.07□□□□□ -0.16
LIMK2-202ENST00000333611 CWC27Q6UX04 472 aaKnown RBP14.07□□□□□ -0.16
LIMK2-202ENST00000333611 DDX41Q9UJV9 622 aaKnown RBP14.07□□□□□ -0.16
LIMK2-202ENST00000333611 ANKRD65E5RJM6 399 aa14.07□□□□□ -0.16
LIMK2-202ENST00000333611 MTHFSDQ2M296 383 aaKnown RBP14.07□□□□□ -0.16
LIMK2-202ENST00000333611 KIF18AQ8NI77 898 aa14.07□□□□□ -0.16
LIMK2-202ENST00000333611 PIK3R4Q99570 1358 aa14.06□□□□□ -0.16
LIMK2-202ENST00000333611 GNL2Q13823 731 aaKnown RBP14.06□□□□□ -0.16
LIMK2-202ENST00000333611 UBTFL1P0CB47 393 aaPredicted RBP14.06□□□□□ -0.16
LIMK2-202ENST00000333611 CHMLP26374 656 aa14.06□□□□□ -0.16
LIMK2-202ENST00000333611 CCT4P50991 539 aaKnown RBP14.06□□□□□ -0.16
LIMK2-202ENST00000333611 CCAR2Q8N163 923 aaKnown RBP14.06□□□□□ -0.16
LIMK2-202ENST00000333611 TSPYL1Q9H0U9 437 aa14.06□□□□□ -0.16
LIMK2-202ENST00000333611 ANXA1P04083 346 aa14.06□□□□□ -0.16
LIMK2-202ENST00000333611 FLIIQ13045 1269 aa14.06□□□□□ -0.16
LIMK2-202ENST00000333611 CLEC17AQ6ZS10 378 aa14.06□□□□□ -0.16
LIMK2-202ENST00000333611 ZNF215Q9UL58 517 aaPredicted RBP14.06□□□□□ -0.16
LIMK2-202ENST00000333611 HTATSF1O43719 755 aaKnown RBP14.05□□□□□ -0.16
LIMK2-202ENST00000333611 CYB5RLQ6IPT4 315 aa14.05□□□□□ -0.16
LIMK2-202ENST00000333611 GOLGA6L1Q8N7Z2 621 aa14.05□□□□□ -0.16
LIMK2-202ENST00000333611 NGDNQ8NEJ9 315 aaKnown RBP14.05□□□□□ -0.16
LIMK2-202ENST00000333611 ATP10DQ9P241 1426 aa14.05□□□□□ -0.16
LIMK2-202ENST00000333611 SYT10Q6XYQ8 523 aa14.05□□□□□ -0.16
LIMK2-202ENST00000333611 USP32Q8NFA0 1604 aa14.05□□□□□ -0.16
LIMK2-202ENST00000333611 PTPRCP08575 1304 aa14.05□□□□□ -0.16
LIMK2-202ENST00000333611 FILIP1Q7Z7B0 1213 aa14.05□□□□□ -0.16
LIMK2-202ENST00000333611 FERMT3Q86UX7 667 aa14.05□□□□□ -0.16
LIMK2-202ENST00000333611 IL25Q9H293 177 aa14.05□□□□□ -0.16
LIMK2-202ENST00000333611 LMTK2Q8IWU2 1503 aa14.04□□□□□ -0.16
LIMK2-202ENST00000333611 BRD1O95696 1058 aa14.04□□□□□ -0.16
LIMK2-202ENST00000333611 FAM193AP78312 1265 aa14.04□□□□□ -0.16
LIMK2-202ENST00000333611 USHBP1Q8N6Y0 703 aa14.04□□□□□ -0.16
LIMK2-202ENST00000333611 ANKRD7Q92527 254 aa14.04□□□□□ -0.16
LIMK2-202ENST00000333611 SMC3Q9UQE7 1217 aa14.04□□□□□ -0.16
LIMK2-202ENST00000333611 IBTKQ9P2D0 1353 aaPredicted RBP14.04□□□□□ -0.16
LIMK2-202ENST00000333611 KIAA1524Q8TCG1 905 aa14.04□□□□□ -0.16
LIMK2-202ENST00000333611 SLC26A8Q96RN1 970 aa14.04□□□□□ -0.16
LIMK2-202ENST00000333611 CCDC83Q8IWF9 413 aa14.03□□□□□ -0.16
LIMK2-202ENST00000333611 ACEP12821 1306 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms