RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 MEGF6O75095 1541 aa21.41■■□□□ 1.02
DDX28-201ENST00000332395 TUBGCP6Q96RT7 1819 aa21.41■■□□□ 1.02
DDX28-201ENST00000332395 POLA2Q14181 598 aa21.41■■□□□ 1.02
DDX28-201ENST00000332395 PROSER3Q2NL68 480 aa21.41■■□□□ 1.02
DDX28-201ENST00000332395 TSHZ3Q63HK5 1081 aa21.41■■□□□ 1.02
DDX28-201ENST00000332395 ABCC6O95255 1503 aa21.41■■□□□ 1.02
DDX28-201ENST00000332395 SCN11AQ9UI33 1791 aa21.41■■□□□ 1.02
DDX28-201ENST00000332395 KDM6AO15550 1401 aaPredicted RBP21.4■■□□□ 1.02
DDX28-201ENST00000332395 CSB-PGBD3P0DP91 1061 aa21.4■■□□□ 1.02
DDX28-201ENST00000332395 SPATA31A3Q5VYP0 1347 aa21.4■■□□□ 1.02
DDX28-201ENST00000332395 DDIT3P35638 169 aa21.4■■□□□ 1.02
DDX28-201ENST00000332395 SPG7Q9UQ90 795 aa21.4■■□□□ 1.02
DDX28-201ENST00000332395 PHKG2P15735 406 aa21.39■■□□□ 1.01
DDX28-201ENST00000332395 CHRNA2Q15822 529 aa21.39■■□□□ 1.01
DDX28-201ENST00000332395 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.39■■□□□ 1.01
DDX28-201ENST00000332395 XIRP1Q702N8 1843 aaKnown RBP21.39■■□□□ 1.01
DDX28-201ENST00000332395 K7ELQ4 463 aaPredicted RBP21.38■■□□□ 1.01
DDX28-201ENST00000332395 REC8O95072 547 aa21.38■■□□□ 1.01
DDX28-201ENST00000332395 MAP3K2Q9Y2U5 619 aa21.38■■□□□ 1.01
DDX28-201ENST00000332395 SRGAP3O43295 1099 aa21.38■■□□□ 1.01
DDX28-201ENST00000332395 RABEP1Q15276 862 aa21.38■■□□□ 1.01
DDX28-201ENST00000332395 SLC52A2Q9HAB3 445 aa21.38■■□□□ 1.01
DDX28-201ENST00000332395 STAP2Q9UGK3 403 aa21.38■■□□□ 1.01
DDX28-201ENST00000332395 ERC2O15083 957 aa21.37■■□□□ 1.01
DDX28-201ENST00000332395 RAB11FIP3O75154 756 aa21.37■■□□□ 1.01
DDX28-201ENST00000332395 SURF6O75683 361 aaKnown RBP21.37■■□□□ 1.01
DDX28-201ENST00000332395 ZNF790Q6PG37 636 aa21.37■■□□□ 1.01
DDX28-201ENST00000332395 KSR2Q6VAB6 950 aa21.37■■□□□ 1.01
DDX28-201ENST00000332395 HYPKQ9NX55 129 aa21.37■■□□□ 1.01
DDX28-201ENST00000332395 PLEKHG2Q9H7P9 1386 aa21.36■■□□□ 1.01
DDX28-201ENST00000332395 IL1RAPL2Q9NP60 686 aa21.36■■□□□ 1.01
DDX28-201ENST00000332395 CPDO75976 1380 aa21.36■■□□□ 1.01
DDX28-201ENST00000332395 ALDH1L1O75891 902 aa21.36■■□□□ 1.01
DDX28-201ENST00000332395 SLC39A6Q13433 755 aa21.36■■□□□ 1.01
DDX28-201ENST00000332395 IFNL2Q8IZJ0 200 aa21.36■■□□□ 1.01
DDX28-201ENST00000332395 DDX21Q9NR30 783 aaKnown RBP eCLIP21.35■■□□□ 1.01
DDX28-201ENST00000332395 AOX1Q06278 1338 aa21.35■■□□□ 1.01
DDX28-201ENST00000332395 NFATC2IPQ8NCF5 419 aa21.34■■□□□ 1.01
DDX28-201ENST00000332395 C5P01031 1676 aa21.34■■□□□ 1.01
DDX28-201ENST00000332395 HSP90AA1P07900 732 aaKnown RBP21.34■■□□□ 1.01
DDX28-201ENST00000332395 BRINP3Q76B58 766 aa21.34■■□□□ 1.01
DDX28-201ENST00000332395 RHPN1Q8TCX5 695 aa21.34■■□□□ 1.01
DDX28-201ENST00000332395 CIZ1Q9ULV3 898 aaPredicted RBP21.34■■□□□ 1.01
DDX28-201ENST00000332395 MCM4P33991 863 aa21.33■■□□□ 1.01
DDX28-201ENST00000332395 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.33■■□□□ 1.01
DDX28-201ENST00000332395 PKD1L3Q7Z443 1732 aa21.33■■□□□ 1.01
DDX28-201ENST00000332395 PDIA6Q15084 440 aa21.33■■□□□ 1
DDX28-201ENST00000332395 KIF1BPQ96EK5 621 aa21.33■■□□□ 1
DDX28-201ENST00000332395 C9orf78Q9NZ63 289 aaPredicted RBP21.33■■□□□ 1
DDX28-201ENST00000332395 TRIM6-TRIM34B2RNG4 842 aa21.32■■□□□ 1
DDX28-201ENST00000332395 MTX1Q13505 466 aa21.32■■□□□ 1
DDX28-201ENST00000332395 MRC1P22897 1456 aa21.32■■□□□ 1
DDX28-201ENST00000332395 CYP27B1O15528 508 aa21.31■■□□□ 1
DDX28-201ENST00000332395 DDX58O95786 925 aaKnown RBP21.31■■□□□ 1
DDX28-201ENST00000332395 CWF19L2Q2TBE0 894 aaKnown RBP21.31■■□□□ 1
DDX28-201ENST00000332395 RILPL2Q969X0 211 aa21.31■■□□□ 1
DDX28-201ENST00000332395 DCAF5Q96JK2 942 aa21.31■■□□□ 1
DDX28-201ENST00000332395 NUTM1Q86Y26 1132 aa21.31■■□□□ 1
DDX28-201ENST00000332395 ESYT1Q9BSJ8 1104 aa21.31■■□□□ 1
DDX28-201ENST00000332395 HSP90AB4PQ58FF6 505 aa21.3■■□□□ 1
DDX28-201ENST00000332395 LINS1Q8NG48 757 aa21.3■■□□□ 1
DDX28-201ENST00000332395 AIMP1Q12904 312 aaKnown RBP21.3■■□□□ 1
DDX28-201ENST00000332395 CHMLP26374 656 aa21.29■■□□□ 1
DDX28-201ENST00000332395 ZNF496Q96IT1 587 aaPredicted RBP21.29■■□□□ 1
DDX28-201ENST00000332395 FOXD4L1Q9NU39 408 aa21.29■■□□□ 1
DDX28-201ENST00000332395 HDAC5Q9UQL6 1122 aa21.29■■□□□ 1
DDX28-201ENST00000332395 STRCQ7RTU9 1775 aa21.29■■□□□ 1
DDX28-201ENST00000332395 UNC5CLQ8IV45 518 aa21.29■■□□□ 1
DDX28-201ENST00000332395 GRM8O00222 908 aa21.27■■□□□ 1
DDX28-201ENST00000332395 TTC5Q8N0Z6 440 aa21.27■■□□□ 1
DDX28-201ENST00000332395 PI4K2BQ8TCG2 481 aa21.27■■□□□ 1
DDX28-201ENST00000332395 MYL6BP14649 208 aa21.26■□□□□ 0.99
DDX28-201ENST00000332395 RAB3GAP1Q15042 981 aa21.26■□□□□ 0.99
DDX28-201ENST00000332395 UTYO14607 1347 aa21.26■□□□□ 0.99
DDX28-201ENST00000332395 ST18O60284 1047 aa21.26■□□□□ 0.99
DDX28-201ENST00000332395 OS9Q13438 667 aaPredicted RBP21.26■□□□□ 0.99
DDX28-201ENST00000332395 RIC3Q7Z5B4 369 aa21.26■□□□□ 0.99
DDX28-201ENST00000332395 TNPO1Q92973 898 aaKnown RBP21.26■□□□□ 0.99
DDX28-201ENST00000332395 SNRPA1P09661 255 aaKnown RBP21.25■□□□□ 0.99
DDX28-201ENST00000332395 PRDM11Q9NQV5 511 aa21.25■□□□□ 0.99
DDX28-201ENST00000332395 LARP1Q6PKG0 1096 aaKnown RBP21.24■□□□□ 0.99
DDX28-201ENST00000332395 PARP4Q9UKK3 1724 aaKnown RBP21.24■□□□□ 0.99
DDX28-201ENST00000332395 SOS2Q07890 1332 aaPredicted RBP21.24■□□□□ 0.99
DDX28-201ENST00000332395 DDX11L8A8MPP1 907 aa21.24■□□□□ 0.99
DDX28-201ENST00000332395 XAGE3Q8WTP9 111 aa21.24■□□□□ 0.99
DDX28-201ENST00000332395 SUCLG2Q96I99 432 aa21.24■□□□□ 0.99
DDX28-201ENST00000332395 FMNL2Q96PY5 1086 aa21.24■□□□□ 0.99
DDX28-201ENST00000332395 SLAIN2Q9P270 581 aa21.24■□□□□ 0.99
DDX28-201ENST00000332395 WDR17Q8IZU2 1322 aa21.24■□□□□ 0.99
DDX28-201ENST00000332395 AK9Q5TCS8 1911 aa21.23■□□□□ 0.99
DDX28-201ENST00000332395 IGKV5-2P06315 115 aa21.23■□□□□ 0.99
DDX28-201ENST00000332395 CABP4P57796 275 aa21.23■□□□□ 0.99
DDX28-201ENST00000332395 COPS6Q7L5N1 327 aa21.23■□□□□ 0.99
DDX28-201ENST00000332395 KAZALD1Q96I82 304 aa21.23■□□□□ 0.99
DDX28-201ENST00000332395 ANO2Q9NQ90 1003 aa21.23■□□□□ 0.99
DDX28-201ENST00000332395 USP16Q9Y5T5 823 aa21.23■□□□□ 0.99
DDX28-201ENST00000332395 ZNF335Q9H4Z2 1342 aaPredicted RBP21.22■□□□□ 0.99
DDX28-201ENST00000332395 USP42Q9H9J4 1324 aaKnown RBP21.22■□□□□ 0.99
DDX28-201ENST00000332395 NEXNQ0ZGT2 675 aa21.22■□□□□ 0.99
DDX28-201ENST00000332395 PA2G4Q9UQ80 394 aaKnown RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms