RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 GRM1Q13255 1194 aa18.93■□□□□ 0.62
PTCH1-201ENST00000331920 ZNF219Q9P2Y4 722 aaPredicted RBP18.93■□□□□ 0.62
PTCH1-201ENST00000331920 HSPA4P34932 840 aa18.92■□□□□ 0.62
PTCH1-201ENST00000331920 TMEM266Q2M3C6 531 aa18.92■□□□□ 0.62
PTCH1-201ENST00000331920 VTI1AQ96AJ9 217 aa18.92■□□□□ 0.62
PTCH1-201ENST00000331920 KIF4AO95239 1232 aa18.92■□□□□ 0.62
PTCH1-201ENST00000331920 BBXQ8WY36 941 aaPredicted RBP18.92■□□□□ 0.62
PTCH1-201ENST00000331920 CWC25Q9NXE8 425 aaPredicted RBP18.92■□□□□ 0.62
PTCH1-201ENST00000331920 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.92■□□□□ 0.62
PTCH1-201ENST00000331920 CTNNA3Q9UI47 895 aa18.92■□□□□ 0.62
PTCH1-201ENST00000331920 V9GYY5 206 aaPredicted RBP18.92■□□□□ 0.62
PTCH1-201ENST00000331920 ECM2O94769 699 aaPredicted RBP18.92■□□□□ 0.62
PTCH1-201ENST00000331920 IGHMBP2P38935 993 aaKnown RBP18.92■□□□□ 0.62
PTCH1-201ENST00000331920 GAS2L2Q8NHY3 880 aa18.92■□□□□ 0.62
PTCH1-201ENST00000331920 EPSTI1Q96J88 318 aa18.92■□□□□ 0.62
PTCH1-201ENST00000331920 RNF216Q9NWF9 866 aaPredicted RBP18.92■□□□□ 0.62
PTCH1-201ENST00000331920 TATP17735 454 aaPredicted RBP18.92■□□□□ 0.62
PTCH1-201ENST00000331920 CETN1Q12798 172 aa18.92■□□□□ 0.62
PTCH1-201ENST00000331920 MSL1Q68DK7 614 aa18.92■□□□□ 0.62
PTCH1-201ENST00000331920 YEATS4O95619 227 aa18.91■□□□□ 0.62
PTCH1-201ENST00000331920 ERCC3P19447 782 aa18.91■□□□□ 0.62
PTCH1-201ENST00000331920 ZBTB16Q05516 673 aa18.91■□□□□ 0.62
PTCH1-201ENST00000331920 CCDC83Q8IWF9 413 aa18.91■□□□□ 0.62
PTCH1-201ENST00000331920 PPP4R3BQ5MIZ7 849 aa18.91■□□□□ 0.62
PTCH1-201ENST00000331920 DDX46Q7L014 1031 aaKnown RBP18.91■□□□□ 0.62
PTCH1-201ENST00000331920 FAM184BQ9ULE4 1060 aa18.91■□□□□ 0.62
PTCH1-201ENST00000331920 FLIIQ13045 1269 aa18.91■□□□□ 0.62
PTCH1-201ENST00000331920 RANBP6O60518 1105 aaKnown RBP18.9■□□□□ 0.62
PTCH1-201ENST00000331920 GJC1P36383 396 aa18.9■□□□□ 0.62
PTCH1-201ENST00000331920 MTHFSP49914 203 aa18.9■□□□□ 0.62
PTCH1-201ENST00000331920 CCDC155Q8N6L0 562 aa18.9■□□□□ 0.62
PTCH1-201ENST00000331920 TMEM110-MUSTN1A8MSY1 372 aa18.9■□□□□ 0.62
PTCH1-201ENST00000331920 CCDC40Q4G0X9 1142 aa18.9■□□□□ 0.62
PTCH1-201ENST00000331920 TSR2Q969E8 191 aaKnown RBP18.9■□□□□ 0.62
PTCH1-201ENST00000331920 ZNF287Q9HBT7 754 aa18.9■□□□□ 0.62
PTCH1-201ENST00000331920 IL1RAPL2Q9NP60 686 aa18.9■□□□□ 0.62
PTCH1-201ENST00000331920 KIAA0753Q2KHM9 967 aa18.9■□□□□ 0.62
PTCH1-201ENST00000331920 LRRC45Q96CN5 670 aa18.9■□□□□ 0.62
PTCH1-201ENST00000331920 FEZ2Q9UHY8 353 aaPredicted RBP18.9■□□□□ 0.62
PTCH1-201ENST00000331920 ESPNB1AK53 854 aa18.89■□□□□ 0.62
PTCH1-201ENST00000331920 SEPT14Q6ZU15 432 aa18.89■□□□□ 0.62
PTCH1-201ENST00000331920 CNNM3Q8NE01 707 aa18.89■□□□□ 0.61
PTCH1-201ENST00000331920 GCC1Q96CN9 775 aa18.89■□□□□ 0.61
PTCH1-201ENST00000331920 GPRASP1Q5JY77 1395 aa18.89■□□□□ 0.61
PTCH1-201ENST00000331920 SRGAP3O43295 1099 aa18.89■□□□□ 0.61
PTCH1-201ENST00000331920 GSTA5Q7RTV2 222 aa18.89■□□□□ 0.61
PTCH1-201ENST00000331920 GTPBP4Q9BZE4 634 aaKnown RBP18.89■□□□□ 0.61
PTCH1-201ENST00000331920 PPP1R9BQ96SB3 815 aa18.89■□□□□ 0.61
PTCH1-201ENST00000331920 VAT1LQ9HCJ6 419 aa18.89■□□□□ 0.61
PTCH1-201ENST00000331920 BIN1O00499 593 aa18.88■□□□□ 0.61
PTCH1-201ENST00000331920 KIF3CO14782 793 aa18.88■□□□□ 0.61
PTCH1-201ENST00000331920 CEP135Q66GS9 1140 aa18.88■□□□□ 0.61
PTCH1-201ENST00000331920 EXOSC9Q06265 439 aaKnown RBP18.88■□□□□ 0.61
PTCH1-201ENST00000331920 CCDC18Q5T9S5 1454 aa18.88■□□□□ 0.61
PTCH1-201ENST00000331920 RAB34Q9BZG1 259 aa18.88■□□□□ 0.61
PTCH1-201ENST00000331920 CNTLNQ9NXG0 1405 aa18.88■□□□□ 0.61
PTCH1-201ENST00000331920 TMC6Q7Z403 805 aa18.88■□□□□ 0.61
PTCH1-201ENST00000331920 ANO10Q9NW15 660 aa18.88■□□□□ 0.61
PTCH1-201ENST00000331920 PPP6R1Q9UPN7 881 aa18.88■□□□□ 0.61
PTCH1-201ENST00000331920 MRVI1Q9Y6F6 885 aa18.88■□□□□ 0.61
PTCH1-201ENST00000331920 METTL24Q5JXM2 366 aa18.88■□□□□ 0.61
PTCH1-201ENST00000331920 PFDN4Q9NQP4 134 aa18.88■□□□□ 0.61
PTCH1-201ENST00000331920 CEP83Q9Y592 693 aa18.88■□□□□ 0.61
PTCH1-201ENST00000331920 PRKAR2BP31323 418 aa18.87■□□□□ 0.61
PTCH1-201ENST00000331920 NLRP5P59047 1200 aa18.87■□□□□ 0.61
PTCH1-201ENST00000331920 SMIM23A6NLE4 172 aa18.87■□□□□ 0.61
PTCH1-201ENST00000331920 XPCQ01831 940 aaPredicted RBP18.87■□□□□ 0.61
PTCH1-201ENST00000331920 CEP57Q86XR8 500 aa18.87■□□□□ 0.61
PTCH1-201ENST00000331920 CKAP2LQ8IYA6 745 aa18.87■□□□□ 0.61
PTCH1-201ENST00000331920 ZNF444Q8N0Y2 327 aaPredicted RBP18.87■□□□□ 0.61
PTCH1-201ENST00000331920 SMC6Q96SB8 1091 aa18.87■□□□□ 0.61
PTCH1-201ENST00000331920 NUTM1Q86Y26 1132 aa18.86■□□□□ 0.61
PTCH1-201ENST00000331920 MKRN1Q9UHC7 482 aaKnown RBP18.86■□□□□ 0.61
PTCH1-201ENST00000331920 KIF2AO00139 706 aaPredicted RBP18.86■□□□□ 0.61
PTCH1-201ENST00000331920 CEP126Q9P2H0 1117 aa18.86■□□□□ 0.61
PTCH1-201ENST00000331920 BTBD11A6QL63 1104 aa18.86■□□□□ 0.61
PTCH1-201ENST00000331920 KRT13P13646 458 aa18.86■□□□□ 0.61
PTCH1-201ENST00000331920 SNX16P57768 344 aa18.86■□□□□ 0.61
PTCH1-201ENST00000331920 CKAP4Q07065 602 aaKnown RBP18.86■□□□□ 0.61
PTCH1-201ENST00000331920 CCT4P50991 539 aaKnown RBP18.85■□□□□ 0.61
PTCH1-201ENST00000331920 SELENOSQ9BQE4 189 aa18.85■□□□□ 0.61
PTCH1-201ENST00000331920 EHMT1Q9H9B1 1298 aa18.85■□□□□ 0.61
PTCH1-201ENST00000331920 C8orf76Q96K31 380 aa18.85■□□□□ 0.61
PTCH1-201ENST00000331920 RRBP1Q9P2E9 1410 aaKnown RBP18.84■□□□□ 0.61
PTCH1-201ENST00000331920 DYNC1I1O14576 645 aa18.84■□□□□ 0.61
PTCH1-201ENST00000331920 SIRT1Q96EB6 747 aa18.84■□□□□ 0.61
PTCH1-201ENST00000331920 NAPBQ9H115 298 aa18.84■□□□□ 0.61
PTCH1-201ENST00000331920 UTP14AQ9BVJ6 771 aaKnown RBP18.84■□□□□ 0.61
PTCH1-201ENST00000331920 BAG4O95429 457 aaKnown RBP18.84■□□□□ 0.61
PTCH1-201ENST00000331920 SSRP1Q08945 709 aaKnown RBP18.84■□□□□ 0.61
PTCH1-201ENST00000331920 CAVIN4Q5BKX8 364 aa18.84■□□□□ 0.61
PTCH1-201ENST00000331920 KRT32Q14532 448 aa18.84■□□□□ 0.61
PTCH1-201ENST00000331920 TMEM132EQ6IEE7 984 aa18.84■□□□□ 0.61
PTCH1-201ENST00000331920 CCDC174Q6PII3 467 aa18.84■□□□□ 0.61
PTCH1-201ENST00000331920 LARP6Q9BRS8 491 aaKnown RBP18.84■□□□□ 0.61
PTCH1-201ENST00000331920 NSRP1Q9H0G5 558 aaKnown RBP18.84■□□□□ 0.61
PTCH1-201ENST00000331920 GEN1Q17RS7 908 aa18.84■□□□□ 0.61
PTCH1-201ENST00000331920 ANKS4BQ8N8V4 417 aa18.84■□□□□ 0.61
PTCH1-201ENST00000331920 CEP120Q8N960 986 aa18.84■□□□□ 0.61
PTCH1-201ENST00000331920 PANK2Q9BZ23 570 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms