RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 TM4SF1P30408 202 aa18.16■□□□□ 0.5
GTF3C6-201ENST00000329970 TEX13AQ9BXU3 409 aaPredicted RBP18.16■□□□□ 0.5
GTF3C6-201ENST00000329970 SRP68Q9UHB9 627 aaKnown RBP18.16■□□□□ 0.5
GTF3C6-201ENST00000329970 NARFQ9UHQ1 456 aa18.16■□□□□ 0.5
GTF3C6-201ENST00000329970 ZBTB1Q9Y2K1 713 aa18.16■□□□□ 0.5
GTF3C6-201ENST00000329970 DLEC1Q9Y238 1755 aa18.16■□□□□ 0.5
GTF3C6-201ENST00000329970 ZPR1O75312 459 aa18.15■□□□□ 0.5
GTF3C6-201ENST00000329970 STARD3NLO95772 234 aa18.15■□□□□ 0.5
GTF3C6-201ENST00000329970 POLRMTO00411 1230 aaKnown RBP18.14■□□□□ 0.49
GTF3C6-201ENST00000329970 HTATSF1O43719 755 aaKnown RBP18.14■□□□□ 0.49
GTF3C6-201ENST00000329970 U2AF1L5P0DN76 240 aaPredicted RBP18.14■□□□□ 0.49
GTF3C6-201ENST00000329970 U2AF1Q01081 240 aaKnown RBP eCLIP18.14■□□□□ 0.49
GTF3C6-201ENST00000329970 DDR1Q08345 913 aa18.14■□□□□ 0.49
GTF3C6-201ENST00000329970 ZNF496Q96IT1 587 aaPredicted RBP18.14■□□□□ 0.49
GTF3C6-201ENST00000329970 ATP10DQ9P241 1426 aa18.14■□□□□ 0.49
GTF3C6-201ENST00000329970 EIF5P55010 431 aaKnown RBP18.13■□□□□ 0.49
GTF3C6-201ENST00000329970 USPL1Q5W0Q7 1092 aa18.13■□□□□ 0.49
GTF3C6-201ENST00000329970 BCORQ6W2J9 1755 aa18.12■□□□□ 0.49
GTF3C6-201ENST00000329970 FMNL2Q96PY5 1086 aa18.12■□□□□ 0.49
GTF3C6-201ENST00000329970 A0A087WZG4 1122 aa18.11■□□□□ 0.49
GTF3C6-201ENST00000329970 A0A0G2JLW4 131 aa18.11■□□□□ 0.49
GTF3C6-201ENST00000329970 DPEP1P16444 411 aa18.11■□□□□ 0.49
GTF3C6-201ENST00000329970 KCNA3P22001 575 aa18.11■□□□□ 0.49
GTF3C6-201ENST00000329970 C1QTNF8P60827 252 aa18.11■□□□□ 0.49
GTF3C6-201ENST00000329970 BTBD11A6QL63 1104 aa18.1■□□□□ 0.49
GTF3C6-201ENST00000329970 GIGYF1O75420 1035 aaPredicted RBP18.1■□□□□ 0.49
GTF3C6-201ENST00000329970 RTF1Q92541 710 aaKnown RBP18.1■□□□□ 0.49
GTF3C6-201ENST00000329970 BCL2L12Q9HB09 334 aa18.1■□□□□ 0.49
GTF3C6-201ENST00000329970 LAMB4A4D0S4 1761 aa18.09■□□□□ 0.49
GTF3C6-201ENST00000329970 KDM3BQ7LBC6 1761 aa18.09■□□□□ 0.49
GTF3C6-201ENST00000329970 IL6STP40189 918 aaPredicted RBP18.09■□□□□ 0.49
GTF3C6-201ENST00000329970 NFIXQ14938 502 aa18.09■□□□□ 0.49
GTF3C6-201ENST00000329970 BCS1LQ9Y276 419 aa18.09■□□□□ 0.49
GTF3C6-201ENST00000329970 SBF1O95248 1867 aa18.09■□□□□ 0.49
GTF3C6-201ENST00000329970 CANXP27824 592 aaKnown RBP18.08■□□□□ 0.48
GTF3C6-201ENST00000329970 PIM2Q9P1W9 311 aa18.08■□□□□ 0.48
GTF3C6-201ENST00000329970 WWC3Q9ULE0 1092 aa18.08■□□□□ 0.48
GTF3C6-201ENST00000329970 ANKRD31Q8N7Z5 1873 aa18.07■□□□□ 0.48
GTF3C6-201ENST00000329970 KCNQ3O43525 872 aa18.05■□□□□ 0.48
GTF3C6-201ENST00000329970 NEFMP07197 916 aa18.05■□□□□ 0.48
GTF3C6-201ENST00000329970 MCM10Q7L590 875 aa18.05■□□□□ 0.48
GTF3C6-201ENST00000329970 PLEKHF1Q96S99 279 aa18.05■□□□□ 0.48
GTF3C6-201ENST00000329970 GPBP1L1Q9HC44 474 aaPredicted RBP18.05■□□□□ 0.48
GTF3C6-201ENST00000329970 SERPINB2P05120 415 aa18.04■□□□□ 0.48
GTF3C6-201ENST00000329970 RALBP1Q15311 655 aa18.04■□□□□ 0.48
GTF3C6-201ENST00000329970 DALRD3Q5D0E6 543 aaKnown RBP18.04■□□□□ 0.48
GTF3C6-201ENST00000329970 PNNQ9H307 717 aaKnown RBP18.04■□□□□ 0.48
GTF3C6-201ENST00000329970 RGL2O15211 777 aa18.03■□□□□ 0.48
GTF3C6-201ENST00000329970 SNRPA1P09661 255 aaKnown RBP18.03■□□□□ 0.48
GTF3C6-201ENST00000329970 A1BGP04217 495 aa18.02■□□□□ 0.48
GTF3C6-201ENST00000329970 TAF7Q15545 349 aaPredicted RBP18.02■□□□□ 0.48
GTF3C6-201ENST00000329970 PDZRN3Q9UPQ7 1066 aa18.02■□□□□ 0.48
GTF3C6-201ENST00000329970 USP16Q9Y5T5 823 aa18.02■□□□□ 0.48
GTF3C6-201ENST00000329970 CARMIL3Q8ND23 1372 aa18.02■□□□□ 0.47
GTF3C6-201ENST00000329970 ARFGEF2Q9Y6D5 1785 aa18.02■□□□□ 0.47
GTF3C6-201ENST00000329970 CHRNA5P30532 468 aa18.01■□□□□ 0.47
GTF3C6-201ENST00000329970 DCTN1Q14203 1278 aa18.01■□□□□ 0.47
GTF3C6-201ENST00000329970 ARHGAP27Q6ZUM4 889 aa18.01■□□□□ 0.47
GTF3C6-201ENST00000329970 PNISRQ8TF01 805 aaKnown RBP18.01■□□□□ 0.47
GTF3C6-201ENST00000329970 COL11A2P13942 1736 aaPredicted RBP18.01■□□□□ 0.47
GTF3C6-201ENST00000329970 CAMTA2O94983 1202 aa18■□□□□ 0.47
GTF3C6-201ENST00000329970 NFE2L2Q16236 605 aa18■□□□□ 0.47
GTF3C6-201ENST00000329970 TBC1D9BQ66K14 1250 aa18■□□□□ 0.47
GTF3C6-201ENST00000329970 NPM2Q86SE8 214 aaKnown RBP18■□□□□ 0.47
GTF3C6-201ENST00000329970 CCDC88AQ3V6T2 1871 aa18■□□□□ 0.47
GTF3C6-201ENST00000329970 CLEC4GQ6UXB4 293 aa17.99■□□□□ 0.47
GTF3C6-201ENST00000329970 TBC1D2BQ9UPU7 963 aa17.99■□□□□ 0.47
GTF3C6-201ENST00000329970 DZIP3Q86Y13 1208 aaKnown RBP17.98■□□□□ 0.47
GTF3C6-201ENST00000329970 DICER1Q9UPY3 1922 aaKnown RBP17.98■□□□□ 0.47
GTF3C6-201ENST00000329970 FER1L6Q2WGJ9 1857 aa17.97■□□□□ 0.47
GTF3C6-201ENST00000329970 SENP3-EIF4A1A0A087X0R7 540 aa17.97■□□□□ 0.47
GTF3C6-201ENST00000329970 PRAMEF22A3QJZ6 481 aa17.97■□□□□ 0.47
GTF3C6-201ENST00000329970 BRIP1Q9BX63 1249 aa17.97■□□□□ 0.47
GTF3C6-201ENST00000329970 ZNF330Q9Y3S2 320 aaPredicted RBP17.97■□□□□ 0.47
GTF3C6-201ENST00000329970 NUP98P52948 1817 aa17.97■□□□□ 0.47
GTF3C6-201ENST00000329970 MAPK8IP3Q9UPT6 1336 aa17.97■□□□□ 0.47
GTF3C6-201ENST00000329970 H0YIN7 160 aa17.96■□□□□ 0.47
GTF3C6-201ENST00000329970 KIF3CO14782 793 aa17.96■□□□□ 0.47
GTF3C6-201ENST00000329970 PRR5LQ6MZQ0 368 aa17.96■□□□□ 0.47
GTF3C6-201ENST00000329970 BICDL1Q6ZP65 573 aa17.96■□□□□ 0.47
GTF3C6-201ENST00000329970 SETDB2Q96T68 719 aa17.96■□□□□ 0.47
GTF3C6-201ENST00000329970 CACNA1SQ13698 1873 aa17.96■□□□□ 0.47
GTF3C6-201ENST00000329970 TNRC6CQ9HCJ0 1690 aaKnown RBP17.96■□□□□ 0.47
GTF3C6-201ENST00000329970 MYBBP1AQ9BQG0 1328 aaKnown RBP17.96■□□□□ 0.46
GTF3C6-201ENST00000329970 ZC3H4Q9UPT8 1303 aaKnown RBP17.96■□□□□ 0.46
GTF3C6-201ENST00000329970 PDE6BP35913 854 aa17.95■□□□□ 0.46
GTF3C6-201ENST00000329970 TTLL6Q8N841 843 aa17.95■□□□□ 0.46
GTF3C6-201ENST00000329970 ZNF526Q8TF50 670 aaPredicted RBP17.95■□□□□ 0.46
GTF3C6-201ENST00000329970 ZNF652Q9Y2D9 606 aa17.95■□□□□ 0.46
GTF3C6-201ENST00000329970 NBPF26B4DH59 902 aa17.94■□□□□ 0.46
GTF3C6-201ENST00000329970 C9orf131Q5VYM1 1079 aa17.94■□□□□ 0.46
GTF3C6-201ENST00000329970 NBPF10Q6P3W6 841 aaKnown RBP17.94■□□□□ 0.46
GTF3C6-201ENST00000329970 C2CD5Q86YS7 1000 aa17.94■□□□□ 0.46
GTF3C6-201ENST00000329970 NBPF15Q8N660 670 aa17.94■□□□□ 0.46
GTF3C6-201ENST00000329970 TIAM2Q8IVF5 1701 aa17.93■□□□□ 0.46
GTF3C6-201ENST00000329970 EIF4A1P60842 406 aaKnown RBP17.93■□□□□ 0.46
GTF3C6-201ENST00000329970 DDX10Q13206 875 aaKnown RBP17.93■□□□□ 0.46
GTF3C6-201ENST00000329970 CNBD1Q8NA66 436 aa17.92■□□□□ 0.46
GTF3C6-201ENST00000329970 BABAM1Q9NWV8 329 aa17.92■□□□□ 0.46
GTF3C6-201ENST00000329970 SLX4Q8IY92 1834 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms