RNA–Protein interactions for RNA: ENST00000328796.4

CLDN6-201, Transcript of claudin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN6, Length 1,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6-201ENST00000328796 MTFR1LQ9H019 292 aa22.04■■□□□ 1.12
CLDN6-201ENST00000328796 SRCAPQ6ZRS2 3230 aa22.04■■□□□ 1.12
CLDN6-201ENST00000328796 STARD3NLO95772 234 aa22.03■■□□□ 1.12
CLDN6-201ENST00000328796 ADRA2BP18089 450 aa22.03■■□□□ 1.12
CLDN6-201ENST00000328796 SPON1Q9HCB6 807 aa22.03■■□□□ 1.12
CLDN6-201ENST00000328796 PHF14O94880 888 aa22.02■■□□□ 1.12
CLDN6-201ENST00000328796 C4AP0C0L4 1744 aa22.01■■□□□ 1.11
CLDN6-201ENST00000328796 LAMB4A4D0S4 1761 aa22.01■■□□□ 1.11
CLDN6-201ENST00000328796 PRAMEF22A3QJZ6 481 aa22.01■■□□□ 1.11
CLDN6-201ENST00000328796 ZNF853P0CG23 659 aa22.01■■□□□ 1.11
CLDN6-201ENST00000328796 CALD1Q05682 793 aaKnown RBP22.01■■□□□ 1.11
CLDN6-201ENST00000328796 CFAP44Q96MT7 982 aa22.01■■□□□ 1.11
CLDN6-201ENST00000328796 ZBTB1Q9Y2K1 713 aa22.01■■□□□ 1.11
CLDN6-201ENST00000328796 USP16Q9Y5T5 823 aa22.01■■□□□ 1.11
CLDN6-201ENST00000328796 SENP3-EIF4A1A0A087X0R7 540 aa22■■□□□ 1.11
CLDN6-201ENST00000328796 MSH5O43196 834 aa22■■□□□ 1.11
CLDN6-201ENST00000328796 TRAPPC3LQ5T215 181 aa22■■□□□ 1.11
CLDN6-201ENST00000328796 WWC1Q8IX03 1113 aa22■■□□□ 1.11
CLDN6-201ENST00000328796 SOS1Q07889 1333 aaPredicted RBP22■■□□□ 1.11
CLDN6-201ENST00000328796 GIGYF1O75420 1035 aaPredicted RBP21.99■■□□□ 1.11
CLDN6-201ENST00000328796 NGEFQ8N5V2 710 aa21.99■■□□□ 1.11
CLDN6-201ENST00000328796 SGIP1Q9BQI5 828 aa21.99■■□□□ 1.11
CLDN6-201ENST00000328796 ATF5Q9Y2D1 282 aaPredicted RBP21.99■■□□□ 1.11
CLDN6-201ENST00000328796 PTGER2P43116 358 aa21.99■■□□□ 1.11
CLDN6-201ENST00000328796 ARHGEF1Q92888 912 aaKnown RBP21.99■■□□□ 1.11
CLDN6-201ENST00000328796 IFT57Q9NWB7 429 aa21.99■■□□□ 1.11
CLDN6-201ENST00000328796 LAS1LQ9Y4W2 734 aaKnown RBP21.99■■□□□ 1.11
CLDN6-201ENST00000328796 GNAI1P63096 354 aa21.98■■□□□ 1.11
CLDN6-201ENST00000328796 A1BGP04217 495 aa21.97■■□□□ 1.11
CLDN6-201ENST00000328796 CANXP27824 592 aaKnown RBP21.96■■□□□ 1.11
CLDN6-201ENST00000328796 EIF5P55010 431 aaKnown RBP21.96■■□□□ 1.11
CLDN6-201ENST00000328796 MBIPQ9NS73 344 aa21.96■■□□□ 1.11
CLDN6-201ENST00000328796 COL15A1P39059 1388 aa21.95■■□□□ 1.1
CLDN6-201ENST00000328796 IL16Q14005 1332 aa21.95■■□□□ 1.1
CLDN6-201ENST00000328796 RFC4P35249 363 aa21.95■■□□□ 1.1
CLDN6-201ENST00000328796 IL6STP40189 918 aaPredicted RBP21.94■■□□□ 1.1
CLDN6-201ENST00000328796 WDR63Q8IWG1 891 aa21.93■■□□□ 1.1
CLDN6-201ENST00000328796 SALL2Q9Y467 1007 aaPredicted RBP21.93■■□□□ 1.1
CLDN6-201ENST00000328796 USP42Q9H9J4 1324 aaKnown RBP21.92■■□□□ 1.1
CLDN6-201ENST00000328796 MSL1Q68DK7 614 aa21.92■■□□□ 1.1
CLDN6-201ENST00000328796 NBPF26B4DH59 902 aa21.91■■□□□ 1.1
CLDN6-201ENST00000328796 GYS1P13807 737 aa21.91■■□□□ 1.1
CLDN6-201ENST00000328796 KRT24Q2M2I5 525 aa21.91■■□□□ 1.1
CLDN6-201ENST00000328796 NBPF10Q6P3W6 841 aaKnown RBP21.91■■□□□ 1.1
CLDN6-201ENST00000328796 NBPF15Q8N660 670 aa21.91■■□□□ 1.1
CLDN6-201ENST00000328796 SRP68Q9UHB9 627 aaKnown RBP21.91■■□□□ 1.1
CLDN6-201ENST00000328796 A0A087WZG4 1122 aa21.9■■□□□ 1.1
CLDN6-201ENST00000328796 HOXB7P09629 217 aa21.9■■□□□ 1.1
CLDN6-201ENST00000328796 POLD1P28340 1107 aa21.9■■□□□ 1.1
CLDN6-201ENST00000328796 NARFQ9UHQ1 456 aa21.9■■□□□ 1.1
CLDN6-201ENST00000328796 ERBB4Q15303 1308 aa21.9■■□□□ 1.1
CLDN6-201ENST00000328796 PIP4K2AP48426 406 aaPredicted RBP21.89■■□□□ 1.1
CLDN6-201ENST00000328796 NLGN1Q8N2Q7 840 aa21.89■■□□□ 1.1
CLDN6-201ENST00000328796 ZNF521Q96K83 1311 aa21.89■■□□□ 1.09
CLDN6-201ENST00000328796 ZPR1O75312 459 aa21.87■■□□□ 1.09
CLDN6-201ENST00000328796 ARXQ96QS3 562 aa21.87■■□□□ 1.09
CLDN6-201ENST00000328796 PPP1R1BQ9UD71 204 aaPredicted RBP21.87■■□□□ 1.09
CLDN6-201ENST00000328796 SCN7AQ01118 1682 aa21.87■■□□□ 1.09
CLDN6-201ENST00000328796 DUSP27Q5VZP5 1158 aa21.87■■□□□ 1.09
CLDN6-201ENST00000328796 USPL1Q5W0Q7 1092 aa21.87■■□□□ 1.09
CLDN6-201ENST00000328796 TSR2Q969E8 191 aaKnown RBP21.87■■□□□ 1.09
CLDN6-201ENST00000328796 ZNF330Q9Y3S2 320 aaPredicted RBP21.87■■□□□ 1.09
CLDN6-201ENST00000328796 EIF2S2P20042 333 aaKnown RBP21.86■■□□□ 1.09
CLDN6-201ENST00000328796 NPM2Q86SE8 214 aaKnown RBP21.86■■□□□ 1.09
CLDN6-201ENST00000328796 BCL2L12Q9HB09 334 aa21.86■■□□□ 1.09
CLDN6-201ENST00000328796 BCORQ6W2J9 1755 aa21.85■■□□□ 1.09
CLDN6-201ENST00000328796 FKBP8Q14318 412 aa21.85■■□□□ 1.09
CLDN6-201ENST00000328796 PDIA6Q15084 440 aa21.85■■□□□ 1.09
CLDN6-201ENST00000328796 TBC1D2BQ9UPU7 963 aa21.85■■□□□ 1.09
CLDN6-201ENST00000328796 C8orf58Q8NAV2 365 aa21.84■■□□□ 1.09
CLDN6-201ENST00000328796 SPINK5Q9NQ38 1064 aaPredicted RBP21.84■■□□□ 1.09
CLDN6-201ENST00000328796 CAMTA2O94983 1202 aa21.83■■□□□ 1.08
CLDN6-201ENST00000328796 MMP10P09238 476 aa21.83■■□□□ 1.08
CLDN6-201ENST00000328796 LRP10Q7Z4F1 713 aa21.83■■□□□ 1.08
CLDN6-201ENST00000328796 DZIP3Q86Y13 1208 aaKnown RBP21.83■■□□□ 1.08
CLDN6-201ENST00000328796 FANCIQ9NVI1 1328 aa21.83■■□□□ 1.08
CLDN6-201ENST00000328796 HDGFL1Q5TGJ6 251 aa21.82■■□□□ 1.08
CLDN6-201ENST00000328796 MYL6BP14649 208 aa21.81■■□□□ 1.08
CLDN6-201ENST00000328796 TM4SF1P30408 202 aa21.81■■□□□ 1.08
CLDN6-201ENST00000328796 PROSER3Q2NL68 480 aa21.81■■□□□ 1.08
CLDN6-201ENST00000328796 ELL2O00472 640 aaPredicted RBP21.8■■□□□ 1.08
CLDN6-201ENST00000328796 RGL2O15211 777 aa21.8■■□□□ 1.08
CLDN6-201ENST00000328796 TSPYL6Q8N831 410 aa21.8■■□□□ 1.08
CLDN6-201ENST00000328796 NECTIN2Q92692 538 aa21.8■■□□□ 1.08
CLDN6-201ENST00000328796 FHDC1Q9C0D6 1143 aaPredicted RBP21.8■■□□□ 1.08
CLDN6-201ENST00000328796 DDX21Q9NR30 783 aaKnown RBP eCLIP21.8■■□□□ 1.08
CLDN6-201ENST00000328796 MYH16Q9H6N6 1097 aa21.79■■□□□ 1.08
CLDN6-201ENST00000328796 ANXA1P04083 346 aa21.78■■□□□ 1.08
CLDN6-201ENST00000328796 DDR1Q08345 913 aa21.78■■□□□ 1.08
CLDN6-201ENST00000328796 GOLGA2Q08379 1002 aa21.78■■□□□ 1.08
CLDN6-201ENST00000328796 NFIXQ14938 502 aa21.78■■□□□ 1.08
CLDN6-201ENST00000328796 CHPF2Q9P2E5 772 aa21.78■■□□□ 1.08
CLDN6-201ENST00000328796 NUP98P52948 1817 aa21.77■■□□□ 1.08
CLDN6-201ENST00000328796 CLEC4GQ6UXB4 293 aa21.77■■□□□ 1.08
CLDN6-201ENST00000328796 TTLL7Q6ZT98 887 aa21.77■■□□□ 1.08
CLDN6-201ENST00000328796 SYT17Q9BSW7 474 aa21.77■■□□□ 1.08
CLDN6-201ENST00000328796 DBF4Q9UBU7 674 aaPredicted RBP21.77■■□□□ 1.08
CLDN6-201ENST00000328796 PARP3Q9Y6F1 533 aa21.77■■□□□ 1.08
CLDN6-201ENST00000328796 AFDNP55196 1824 aaKnown RBP21.77■■□□□ 1.08
CLDN6-201ENST00000328796 KIF13BQ9NQT8 1826 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms