RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 KSR2Q6VAB6 950 aa20.13■□□□□ 0.81
LMNB2-201ENST00000325327 TDO2P48775 406 aa20.12■□□□□ 0.81
LMNB2-201ENST00000325327 SMC3Q9UQE7 1217 aa20.12■□□□□ 0.81
LMNB2-201ENST00000325327 ZFYVE9O95405 1425 aa20.12■□□□□ 0.81
LMNB2-201ENST00000325327 APBA3O96018 575 aa20.12■□□□□ 0.81
LMNB2-201ENST00000325327 MX1P20591 662 aa20.12■□□□□ 0.81
LMNB2-201ENST00000325327 PIK3C2GO75747 1445 aa20.12■□□□□ 0.81
LMNB2-201ENST00000325327 HELBQ8NG08 1087 aaPredicted RBP20.12■□□□□ 0.81
LMNB2-201ENST00000325327 NLRP3Q96P20 1036 aa20.12■□□□□ 0.81
LMNB2-201ENST00000325327 A2ML1A8K2U0 1454 aa20.11■□□□□ 0.81
LMNB2-201ENST00000325327 KCNQ3O43525 872 aa20.11■□□□□ 0.81
LMNB2-201ENST00000325327 KCNQ4P56696 695 aa20.11■□□□□ 0.81
LMNB2-201ENST00000325327 DNTTIP2Q5QJE6 756 aaKnown RBP20.11■□□□□ 0.81
LMNB2-201ENST00000325327 DRC7Q8IY82 874 aa20.11■□□□□ 0.81
LMNB2-201ENST00000325327 AKAP2Q9Y2D5 859 aa20.11■□□□□ 0.81
LMNB2-201ENST00000325327 ARHGEF25Q86VW2 580 aa20.11■□□□□ 0.81
LMNB2-201ENST00000325327 NACAP1Q9BZK3 213 aa20.11■□□□□ 0.81
LMNB2-201ENST00000325327 CDC5LQ99459 802 aaKnown RBP20.1■□□□□ 0.81
LMNB2-201ENST00000325327 STK3Q13188 491 aa20.1■□□□□ 0.81
LMNB2-201ENST00000325327 PA2G4Q9UQ80 394 aaKnown RBP20.1■□□□□ 0.81
LMNB2-201ENST00000325327 GRM8O00222 908 aa20.1■□□□□ 0.81
LMNB2-201ENST00000325327 FAM89AQ96GI7 184 aa20.1■□□□□ 0.81
LMNB2-201ENST00000325327 HIP1O00291 1037 aa20.09■□□□□ 0.81
LMNB2-201ENST00000325327 AIDAQ96BJ3 306 aa20.09■□□□□ 0.81
LMNB2-201ENST00000325327 CDCA7Q9BWT1 371 aaPredicted RBP20.09■□□□□ 0.81
LMNB2-201ENST00000325327 SART3Q15020 963 aaKnown RBP20.09■□□□□ 0.81
LMNB2-201ENST00000325327 MRPL50Q8N5N7 158 aaKnown RBP20.09■□□□□ 0.81
LMNB2-201ENST00000325327 TRIM35Q9UPQ4 493 aa20.08■□□□□ 0.81
LMNB2-201ENST00000325327 MINDY4BA8MYZ0 360 aa20.08■□□□□ 0.8
LMNB2-201ENST00000325327 SLC52A2Q9HAB3 445 aa20.08■□□□□ 0.8
LMNB2-201ENST00000325327 RLBP1P12271 317 aa20.08■□□□□ 0.8
LMNB2-201ENST00000325327 NBPF14Q5TI25 921 aa20.08■□□□□ 0.8
LMNB2-201ENST00000325327 GLRX3O76003 335 aaKnown RBP20.07■□□□□ 0.8
LMNB2-201ENST00000325327 ARAP3Q8WWN8 1544 aa20.07■□□□□ 0.8
LMNB2-201ENST00000325327 ST5P78524 1137 aa20.07■□□□□ 0.8
LMNB2-201ENST00000325327 SLC4A8Q2Y0W8 1093 aa20.07■□□□□ 0.8
LMNB2-201ENST00000325327 TRAPPC3LQ5T215 181 aa20.07■□□□□ 0.8
LMNB2-201ENST00000325327 DZIP1Q86YF9 867 aaKnown RBP20.07■□□□□ 0.8
LMNB2-201ENST00000325327 IL17REQ8NFR9 667 aa20.07■□□□□ 0.8
LMNB2-201ENST00000325327 ABCA9Q8IUA7 1624 aa20.07■□□□□ 0.8
LMNB2-201ENST00000325327 TPTE2Q6XPS3 522 aa20.06■□□□□ 0.8
LMNB2-201ENST00000325327 LINS1Q8NG48 757 aa20.06■□□□□ 0.8
LMNB2-201ENST00000325327 TCEAL9Q9UHQ7 104 aa20.06■□□□□ 0.8
LMNB2-201ENST00000325327 ARHGAP31Q2M1Z3 1444 aa20.06■□□□□ 0.8
LMNB2-201ENST00000325327 SLC5A1P13866 664 aa20.06■□□□□ 0.8
LMNB2-201ENST00000325327 NSFL1CQ9UNZ2 370 aaKnown RBP20.06■□□□□ 0.8
LMNB2-201ENST00000325327 PSMA5P28066 241 aa20.06■□□□□ 0.8
LMNB2-201ENST00000325327 DDX21Q9NR30 783 aaKnown RBP eCLIP20.06■□□□□ 0.8
LMNB2-201ENST00000325327 SLC3A2P08195 630 aaKnown RBP20.06■□□□□ 0.8
LMNB2-201ENST00000325327 NUP133Q8WUM0 1156 aa20.06■□□□□ 0.8
LMNB2-201ENST00000325327 PIBF1Q8WXW3 757 aa20.06■□□□□ 0.8
LMNB2-201ENST00000325327 GOLIM4O00461 696 aa20.05■□□□□ 0.8
LMNB2-201ENST00000325327 HCLS1P14317 486 aaPredicted RBP20.05■□□□□ 0.8
LMNB2-201ENST00000325327 CCDC34Q96HJ3 373 aa20.05■□□□□ 0.8
LMNB2-201ENST00000325327 PCDHB15Q9Y5E8 787 aa20.05■□□□□ 0.8
LMNB2-201ENST00000325327 CDC42BPBQ9Y5S2 1711 aa20.05■□□□□ 0.8
LMNB2-201ENST00000325327 CCDC152Q4G0S7 254 aa20.05■□□□□ 0.8
LMNB2-201ENST00000325327 ZSCAN25Q6NSZ9 544 aa20.04■□□□□ 0.8
LMNB2-201ENST00000325327 IGHDP01880 384 aa20.04■□□□□ 0.8
LMNB2-201ENST00000325327 ANKRD18AQ8IVF6 992 aa20.04■□□□□ 0.8
LMNB2-201ENST00000325327 USP16Q9Y5T5 823 aa20.04■□□□□ 0.8
LMNB2-201ENST00000325327 UTP14AQ9BVJ6 771 aaKnown RBP20.04■□□□□ 0.8
LMNB2-201ENST00000325327 DDX49Q9Y6V7 483 aaKnown RBP20.04■□□□□ 0.8
LMNB2-201ENST00000325327 IRS4O14654 1257 aaPredicted RBP20.03■□□□□ 0.8
LMNB2-201ENST00000325327 RAB11FIP3O75154 756 aa20.03■□□□□ 0.8
LMNB2-201ENST00000325327 SBNO2Q9Y2G9 1366 aa20.03■□□□□ 0.8
LMNB2-201ENST00000325327 F8W031 263 aaPredicted RBP20.03■□□□□ 0.8
LMNB2-201ENST00000325327 TMOD2Q9NZR1 351 aa20.03■□□□□ 0.8
LMNB2-201ENST00000325327 UPF3BQ9BZI7 483 aaKnown RBP20.03■□□□□ 0.8
LMNB2-201ENST00000325327 JAG2Q9Y219 1238 aa20.03■□□□□ 0.8
LMNB2-201ENST00000325327 USP5P45974 858 aa20.03■□□□□ 0.8
LMNB2-201ENST00000325327 TRPC5Q9UL62 973 aaPredicted RBP20.03■□□□□ 0.8
LMNB2-201ENST00000325327 PHKG2P15735 406 aa20.02■□□□□ 0.8
LMNB2-201ENST00000325327 CCAR1Q8IX12 1150 aaKnown RBP20.02■□□□□ 0.8
LMNB2-201ENST00000325327 TRIM37O94972 964 aa20.02■□□□□ 0.8
LMNB2-201ENST00000325327 CHL1O00533 1208 aa20.02■□□□□ 0.79
LMNB2-201ENST00000325327 MAP3K4Q9Y6R4 1608 aa20.01■□□□□ 0.79
LMNB2-201ENST00000325327 SAFBQ15424 915 aaKnown RBP eCLIP20.01■□□□□ 0.79
LMNB2-201ENST00000325327 ATP6V1DQ9Y5K8 247 aa20.01■□□□□ 0.79
LMNB2-201ENST00000325327 ASAP1Q9ULH1 1129 aa20.01■□□□□ 0.79
LMNB2-201ENST00000325327 PARP3Q9Y6F1 533 aa20.01■□□□□ 0.79
LMNB2-201ENST00000325327 STK32BQ9NY57 414 aa20■□□□□ 0.79
LMNB2-201ENST00000325327 USP6P35125 1406 aa20■□□□□ 0.79
LMNB2-201ENST00000325327 SYAP1Q96A49 352 aaPredicted RBP20■□□□□ 0.79
LMNB2-201ENST00000325327 NPC1L1Q9UHC9 1359 aa20■□□□□ 0.79
LMNB2-201ENST00000325327 MAP3K12Q12852 859 aa20■□□□□ 0.79
LMNB2-201ENST00000325327 RHPN1Q8TCX5 695 aa20■□□□□ 0.79
LMNB2-201ENST00000325327 JAKMIP1Q96N16 626 aaKnown RBP20■□□□□ 0.79
LMNB2-201ENST00000325327 MSL1Q68DK7 614 aa20■□□□□ 0.79
LMNB2-201ENST00000325327 ECHDC1Q9NTX5 307 aa20■□□□□ 0.79
LMNB2-201ENST00000325327 PES1O00541 588 aaKnown RBP19.99■□□□□ 0.79
LMNB2-201ENST00000325327 CSPP1Q1MSJ5 1256 aa19.99■□□□□ 0.79
LMNB2-201ENST00000325327 CYP46A1Q9Y6A2 500 aa19.99■□□□□ 0.79
LMNB2-201ENST00000325327 POLR3DP05423 398 aaPredicted RBP19.99■□□□□ 0.79
LMNB2-201ENST00000325327 KLHDC4Q8TBB5 520 aa19.99■□□□□ 0.79
LMNB2-201ENST00000325327 ARHGAP45Q92619 1136 aa19.99■□□□□ 0.79
LMNB2-201ENST00000325327 BICD2Q8TD16 824 aa19.99■□□□□ 0.79
LMNB2-201ENST00000325327 MPHOSPH10O00566 681 aaKnown RBP19.98■□□□□ 0.79
LMNB2-201ENST00000325327 BLOC1S2Q6QNY1 142 aa19.98■□□□□ 0.79
LMNB2-201ENST00000325327 ALDH1L1O75891 902 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms