RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 A0A0G2JLW4 131 aa16.64■□□□□ 0.25
TPM3-204ENST00000323144 DPEP1P16444 411 aa16.64■□□□□ 0.25
TPM3-204ENST00000323144 ZNF526Q8TF50 670 aaPredicted RBP16.64■□□□□ 0.25
TPM3-204ENST00000323144 RSPH6AQ9H0K4 717 aa16.64■□□□□ 0.25
TPM3-204ENST00000323144 PARP3Q9Y6F1 533 aa16.64■□□□□ 0.25
TPM3-204ENST00000323144 SBF1O95248 1867 aa16.64■□□□□ 0.25
TPM3-204ENST00000323144 PRKAR2BP31323 418 aa16.63■□□□□ 0.25
TPM3-204ENST00000323144 USPL1Q5W0Q7 1092 aa16.63■□□□□ 0.25
TPM3-204ENST00000323144 ARFGEF2Q9Y6D5 1785 aa16.63■□□□□ 0.25
TPM3-204ENST00000323144 HEG1Q9ULI3 1381 aa16.63■□□□□ 0.25
TPM3-204ENST00000323144 POLRMTO00411 1230 aaKnown RBP16.62■□□□□ 0.25
TPM3-204ENST00000323144 PPP2R1AP30153 589 aa16.62■□□□□ 0.25
TPM3-204ENST00000323144 GAS2L2Q8NHY3 880 aa16.62■□□□□ 0.25
TPM3-204ENST00000323144 BCS1LQ9Y276 419 aa16.62■□□□□ 0.25
TPM3-204ENST00000323144 TNRC6CQ9HCJ0 1690 aaKnown RBP16.62■□□□□ 0.25
TPM3-204ENST00000323144 IL17REQ8NFR9 667 aa16.61■□□□□ 0.25
TPM3-204ENST00000323144 PHACTR3Q96KR7 559 aa16.61■□□□□ 0.25
TPM3-204ENST00000323144 GNAT3A8MTJ3 354 aa16.6■□□□□ 0.25
TPM3-204ENST00000323144 TGFB2P61812 414 aa16.6■□□□□ 0.25
TPM3-204ENST00000323144 ZNF496Q96IT1 587 aaPredicted RBP16.6■□□□□ 0.25
TPM3-204ENST00000323144 BCL2L12Q9HB09 334 aa16.6■□□□□ 0.25
TPM3-204ENST00000323144 KCNA3P22001 575 aa16.59■□□□□ 0.25
TPM3-204ENST00000323144 CHRNA5P30532 468 aa16.59■□□□□ 0.25
TPM3-204ENST00000323144 TEFQ10587 303 aa16.59■□□□□ 0.25
TPM3-204ENST00000323144 TTC5Q8N0Z6 440 aa16.59■□□□□ 0.25
TPM3-204ENST00000323144 CFAP53Q96M91 514 aa16.59■□□□□ 0.25
TPM3-204ENST00000323144 CCDC88AQ3V6T2 1871 aa16.59■□□□□ 0.25
TPM3-204ENST00000323144 CANXP27824 592 aaKnown RBP16.58■□□□□ 0.24
TPM3-204ENST00000323144 VSIG10Q8N0Z9 540 aa16.58■□□□□ 0.24
TPM3-204ENST00000323144 GPBP1L1Q9HC44 474 aaPredicted RBP16.58■□□□□ 0.24
TPM3-204ENST00000323144 KCNQ3O43525 872 aa16.57■□□□□ 0.24
TPM3-204ENST00000323144 ZPR1O75312 459 aa16.57■□□□□ 0.24
TPM3-204ENST00000323144 FCHSD2O94868 740 aa16.57■□□□□ 0.24
TPM3-204ENST00000323144 NFIXQ14938 502 aa16.57■□□□□ 0.24
TPM3-204ENST00000323144 ZNF790Q6PG37 636 aa16.57■□□□□ 0.24
TPM3-204ENST00000323144 NARFQ9UHQ1 456 aa16.57■□□□□ 0.24
TPM3-204ENST00000323144 TM4SF1P30408 202 aa16.56■□□□□ 0.24
TPM3-204ENST00000323144 U2AF1L5P0DN76 240 aaPredicted RBP16.55■□□□□ 0.24
TPM3-204ENST00000323144 U2AF1Q01081 240 aaKnown RBP eCLIP16.55■□□□□ 0.247e-10■■□□□ 13
TPM3-204ENST00000323144 MCM10Q7L590 875 aa16.54■□□□□ 0.24
TPM3-204ENST00000323144 ZNF330Q9Y3S2 320 aaPredicted RBP16.54■□□□□ 0.24
TPM3-204ENST00000323144 FER1L6Q2WGJ9 1857 aa16.54■□□□□ 0.24
TPM3-204ENST00000323144 WDR90Q96KV7 1748 aa16.53■□□□□ 0.24
TPM3-204ENST00000323144 CEP350Q5VT06 3117 aa16.53■□□□□ 0.24
TPM3-204ENST00000323144 PRAMEF22A3QJZ6 481 aa16.53■□□□□ 0.24
TPM3-204ENST00000323144 PIP4K2AP48426 406 aaPredicted RBP16.53■□□□□ 0.24
TPM3-204ENST00000323144 EIF5P55010 431 aaKnown RBP16.53■□□□□ 0.24
TPM3-204ENST00000323144 DCTN1Q14203 1278 aa16.53■□□□□ 0.24
TPM3-204ENST00000323144 ARHGAP27Q6ZUM4 889 aa16.53■□□□□ 0.24
TPM3-204ENST00000323144 BICDL1Q6ZP65 573 aa16.52■□□□□ 0.24
TPM3-204ENST00000323144 FMNL2Q96PY5 1086 aa16.52■□□□□ 0.24
TPM3-204ENST00000323144 DICER1Q9UPY3 1922 aaKnown RBP16.51■□□□□ 0.23
TPM3-204ENST00000323144 BTBD11A6QL63 1104 aa16.51■□□□□ 0.23
TPM3-204ENST00000323144 KIF3CO14782 793 aa16.51■□□□□ 0.23
TPM3-204ENST00000323144 STARD3NLO95772 234 aa16.51■□□□□ 0.23
TPM3-204ENST00000323144 A1BGP04217 495 aa16.51■□□□□ 0.23
TPM3-204ENST00000323144 RASSF7Q02833 373 aa16.51■□□□□ 0.23
TPM3-204ENST00000323144 TBC1D9BQ66K14 1250 aa16.51■□□□□ 0.23
TPM3-204ENST00000323144 PIM2Q9P1W9 311 aa16.51■□□□□ 0.23
TPM3-204ENST00000323144 NUDCQ9Y266 331 aa16.51■□□□□ 0.23
TPM3-204ENST00000323144 SERPINB2P05120 415 aa16.5■□□□□ 0.23
TPM3-204ENST00000323144 DALRD3Q5D0E6 543 aaKnown RBP16.5■□□□□ 0.23
TPM3-204ENST00000323144 NUP98P52948 1817 aa16.49■□□□□ 0.23
TPM3-204ENST00000323144 SLX4Q8IY92 1834 aa16.49■□□□□ 0.23
TPM3-204ENST00000323144 C9orf131Q5VYM1 1079 aa16.49■□□□□ 0.23
TPM3-204ENST00000323144 TBC1D2BQ9UPU7 963 aa16.49■□□□□ 0.23
TPM3-204ENST00000323144 CAMTA2O94983 1202 aa16.48■□□□□ 0.23
TPM3-204ENST00000323144 IL6STP40189 918 aaPredicted RBP16.48■□□□□ 0.23
TPM3-204ENST00000323144 CCDC24Q8N4L8 307 aa16.48■□□□□ 0.23
TPM3-204ENST00000323144 NMRK2Q9NPI5 230 aa16.48■□□□□ 0.23
TPM3-204ENST00000323144 ANKRD36CQ5JPF3 1778 aa16.48■□□□□ 0.23
TPM3-204ENST00000323144 A0A087WZG4 1122 aa16.47■□□□□ 0.23
TPM3-204ENST00000323144 RNF181Q9P0P0 153 aa16.47■□□□□ 0.23
TPM3-204ENST00000323144 PRELPP51888 382 aa16.46■□□□□ 0.23
TPM3-204ENST00000323144 PRR5LQ6MZQ0 368 aa16.46■□□□□ 0.23
TPM3-204ENST00000323144 C2CD5Q86YS7 1000 aa16.46■□□□□ 0.23
TPM3-204ENST00000323144 RTF1Q92541 710 aaKnown RBP16.46■□□□□ 0.23
TPM3-204ENST00000323144 USP16Q9Y5T5 823 aa16.46■□□□□ 0.23
TPM3-204ENST00000323144 THUMPD2Q9BTF0 503 aaKnown RBP16.45■□□□□ 0.22
TPM3-204ENST00000323144 TEX13AQ9BXU3 409 aaPredicted RBP16.45■□□□□ 0.22
TPM3-204ENST00000323144 DZIP3Q86Y13 1208 aaKnown RBP16.44■□□□□ 0.22
TPM3-204ENST00000323144 PLEKHF1Q96S99 279 aa16.44■□□□□ 0.22
TPM3-204ENST00000323144 NBPF26B4DH59 902 aa16.43■□□□□ 0.22
TPM3-204ENST00000323144 HSPA6P17066 643 aa16.43■□□□□ 0.22
TPM3-204ENST00000323144 NBPF10Q6P3W6 841 aaKnown RBP16.43■□□□□ 0.22
TPM3-204ENST00000323144 NBPF15Q8N660 670 aa16.43■□□□□ 0.22
TPM3-204ENST00000323144 MIS18AQ9NYP9 233 aa16.43■□□□□ 0.22
TPM3-204ENST00000323144 LAMB2P55268 1798 aa16.42■□□□□ 0.22
TPM3-204ENST00000323144 NFKBIEO00221 500 aa16.42■□□□□ 0.22
TPM3-204ENST00000323144 CNBD1Q8NA66 436 aa16.42■□□□□ 0.22
TPM3-204ENST00000323144 SNRPA1P09661 255 aaKnown RBP16.41■□□□□ 0.22
TPM3-204ENST00000323144 ABCC12Q96J65 1359 aa16.4■□□□□ 0.22
TPM3-204ENST00000323144 HTATSF1O43719 755 aaKnown RBP16.4■□□□□ 0.22
TPM3-204ENST00000323144 NFE2L2Q16236 605 aa16.4■□□□□ 0.22
TPM3-204ENST00000323144 TTLL6Q8N841 843 aa16.4■□□□□ 0.22
TPM3-204ENST00000323144 H0YIN7 160 aa16.39■□□□□ 0.21
TPM3-204ENST00000323144 ZNF219Q9P2Y4 722 aaPredicted RBP16.39■□□□□ 0.21
TPM3-204ENST00000323144 MAPK8IP3Q9UPT6 1336 aa16.39■□□□□ 0.21
TPM3-204ENST00000323144 ZNF622Q969S3 477 aaKnown RBP eCLIP16.38■□□□□ 0.212e-8■■□□□ 13.1
TPM3-204ENST00000323144 BRIP1Q9BX63 1249 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms