RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 DHX8Q14562 1220 aaKnown RBP19.48■□□□□ 0.71
PACS1-201ENST00000320580 JAKMIP3Q5VZ66 844 aa19.48■□□□□ 0.71
PACS1-201ENST00000320580 FAM193AP78312 1265 aa19.47■□□□□ 0.71
PACS1-201ENST00000320580 ZSCAN26Q16670 478 aa19.47■□□□□ 0.71
PACS1-201ENST00000320580 MBD5Q9P267 1494 aa19.47■□□□□ 0.71
PACS1-201ENST00000320580 KIAA0754O94854 1291 aa19.47■□□□□ 0.71
PACS1-201ENST00000320580 DTNBO60941 627 aa19.47■□□□□ 0.71
PACS1-201ENST00000320580 UBTFL1P0CB47 393 aaPredicted RBP19.47■□□□□ 0.71
PACS1-201ENST00000320580 CENPHQ9H3R5 247 aa19.47■□□□□ 0.71
PACS1-201ENST00000320580 ZCCHC11Q5TAX3 1644 aaKnown RBP19.47■□□□□ 0.71
PACS1-201ENST00000320580 NUTM1Q86Y26 1132 aa19.46■□□□□ 0.71
PACS1-201ENST00000320580 ESYT1Q9BSJ8 1104 aa19.46■□□□□ 0.71
PACS1-201ENST00000320580 UHRF1BP1LA0JNW5 1464 aa19.46■□□□□ 0.71
PACS1-201ENST00000320580 CFAP45Q9UL16 551 aa19.46■□□□□ 0.71
PACS1-201ENST00000320580 SYT1P21579 422 aa19.46■□□□□ 0.71
PACS1-201ENST00000320580 ERCC6LQ2NKX8 1250 aa19.46■□□□□ 0.71
PACS1-201ENST00000320580 CFAP100Q494V2 611 aa19.46■□□□□ 0.71
PACS1-201ENST00000320580 OLFM4Q6UX06 510 aa19.46■□□□□ 0.71
PACS1-201ENST00000320580 CLASP1Q7Z460 1538 aa19.45■□□□□ 0.7
PACS1-201ENST00000320580 CASQ1P31415 396 aa19.45■□□□□ 0.7
PACS1-201ENST00000320580 SYTL4Q96C24 671 aaPredicted RBP19.45■□□□□ 0.7
PACS1-201ENST00000320580 DDX11Q96FC9 970 aa19.45■□□□□ 0.7
PACS1-201ENST00000320580 CTNNA3Q9UI47 895 aa19.45■□□□□ 0.7
PACS1-201ENST00000320580 CCDC9Q9Y3X0 531 aaKnown RBP19.45■□□□□ 0.7
PACS1-201ENST00000320580 SYNE3Q6ZMZ3 975 aa19.45■□□□□ 0.7
PACS1-201ENST00000320580 POLR3AO14802 1390 aaPredicted RBP19.45■□□□□ 0.7
PACS1-201ENST00000320580 ZBTB7BO15156 539 aaPredicted RBP19.45■□□□□ 0.7
PACS1-201ENST00000320580 PRPF40BQ6NWY9 871 aaKnown RBP19.45■□□□□ 0.7
PACS1-201ENST00000320580 ZSCAN25Q6NSZ9 544 aa19.44■□□□□ 0.7
PACS1-201ENST00000320580 MICALL1Q8N3F8 863 aa19.44■□□□□ 0.7
PACS1-201ENST00000320580 SLC26A8Q96RN1 970 aa19.44■□□□□ 0.7
PACS1-201ENST00000320580 CARD14Q9BXL6 1004 aa19.44■□□□□ 0.7
PACS1-201ENST00000320580 ZSCAN12O43309 604 aa19.44■□□□□ 0.7
PACS1-201ENST00000320580 CEBPAP49715 358 aaPredicted RBP19.44■□□□□ 0.7
PACS1-201ENST00000320580 ZNF75DP51815 510 aa19.44■□□□□ 0.7
PACS1-201ENST00000320580 STK38Q15208 465 aa19.44■□□□□ 0.7
PACS1-201ENST00000320580 DCTPP1Q9H773 170 aa19.44■□□□□ 0.7
PACS1-201ENST00000320580 PDE1AP54750 535 aa19.44■□□□□ 0.7
PACS1-201ENST00000320580 BLOC1S2Q6QNY1 142 aa19.44■□□□□ 0.7
PACS1-201ENST00000320580 VPS18Q9P253 973 aa19.44■□□□□ 0.7
PACS1-201ENST00000320580 ANKRD36BQ8N2N9 1353 aa19.43■□□□□ 0.7
PACS1-201ENST00000320580 GSPT1P15170 499 aaKnown RBP19.43■□□□□ 0.7
PACS1-201ENST00000320580 TSPYL4Q9UJ04 414 aa19.43■□□□□ 0.7
PACS1-201ENST00000320580 STX1AQ16623 288 aa19.43■□□□□ 0.7
PACS1-201ENST00000320580 NECAB1Q8N987 351 aa19.43■□□□□ 0.7
PACS1-201ENST00000320580 ANAPC15P60006 121 aa19.43■□□□□ 0.7
PACS1-201ENST00000320580 GNG11P61952 73 aa19.43■□□□□ 0.7
PACS1-201ENST00000320580 ZNF396Q96N95 335 aaPredicted RBP19.43■□□□□ 0.7
PACS1-201ENST00000320580 CBX8Q9HC52 389 aa19.43■□□□□ 0.7
PACS1-201ENST00000320580 ZNF518AQ6AHZ1 1483 aa19.43■□□□□ 0.7
PACS1-201ENST00000320580 SH2B1Q9NRF2 756 aaPredicted RBP19.42■□□□□ 0.7
PACS1-201ENST00000320580 SPG7Q9UQ90 795 aa19.42■□□□□ 0.7
PACS1-201ENST00000320580 KDM5CP41229 1560 aa19.42■□□□□ 0.7
PACS1-201ENST00000320580 IDI1Q13907 227 aa19.42■□□□□ 0.7
PACS1-201ENST00000320580 EID1Q9Y6B2 187 aa19.42■□□□□ 0.7
PACS1-201ENST00000320580 FCHSD2O94868 740 aa19.42■□□□□ 0.7
PACS1-201ENST00000320580 TSR1Q2NL82 804 aaKnown RBP19.42■□□□□ 0.7
PACS1-201ENST00000320580 NFE2L2Q16236 605 aa19.42■□□□□ 0.7
PACS1-201ENST00000320580 DHX37Q8IY37 1157 aaKnown RBP19.42■□□□□ 0.7
PACS1-201ENST00000320580 NRBP1Q9UHY1 535 aa19.42■□□□□ 0.7
PACS1-201ENST00000320580 HDAC5Q9UQL6 1122 aa19.42■□□□□ 0.7
PACS1-201ENST00000320580 USP16Q9Y5T5 823 aa19.42■□□□□ 0.7
PACS1-201ENST00000320580 BCORL1Q5H9F3 1711 aa19.41■□□□□ 0.7
PACS1-201ENST00000320580 SAMD9LQ8IVG5 1584 aa19.41■□□□□ 0.7
PACS1-201ENST00000320580 PHACTR2O75167 634 aa19.41■□□□□ 0.7
PACS1-201ENST00000320580 CAVIN2O95810 425 aa19.41■□□□□ 0.7
PACS1-201ENST00000320580 CLEC17AQ6ZS10 378 aa19.41■□□□□ 0.7
PACS1-201ENST00000320580 OAS2P29728 719 aaKnown RBP19.41■□□□□ 0.7
PACS1-201ENST00000320580 CDR1P51861 262 aa19.41■□□□□ 0.7
PACS1-201ENST00000320580 MYCBPQ99417 103 aaPredicted RBP19.41■□□□□ 0.7
PACS1-201ENST00000320580 SHANK2Q9UPX8 1470 aa19.41■□□□□ 0.7
PACS1-201ENST00000320580 DUOX2Q9NRD8 1548 aa19.41■□□□□ 0.7
PACS1-201ENST00000320580 CLASRPQ8N2M8 674 aaKnown RBP19.41■□□□□ 0.7
PACS1-201ENST00000320580 A2MP01023 1474 aa19.4■□□□□ 0.7
PACS1-201ENST00000320580 CT47A1Q5JQC4 288 aaPredicted RBP19.4■□□□□ 0.7
PACS1-201ENST00000320580 DCTN1Q14203 1278 aa19.4■□□□□ 0.7
PACS1-201ENST00000320580 ANKRD44Q8N8A2 993 aa19.4■□□□□ 0.7
PACS1-201ENST00000320580 ANKRD1Q15327 319 aa19.4■□□□□ 0.7
PACS1-201ENST00000320580 CCDC91Q7Z6B0 441 aa19.4■□□□□ 0.7
PACS1-201ENST00000320580 ARHGAP45Q92619 1136 aa19.4■□□□□ 0.7
PACS1-201ENST00000320580 FAM135AQ9P2D6 1515 aa19.4■□□□□ 0.7
PACS1-201ENST00000320580 RAB11FIP3O75154 756 aa19.39■□□□□ 0.7
PACS1-201ENST00000320580 CCT4P50991 539 aaKnown RBP19.39■□□□□ 0.7
PACS1-201ENST00000320580 CAGE1Q8TC20 777 aa19.39■□□□□ 0.7
PACS1-201ENST00000320580 SPTLC3Q9NUV7 552 aa19.39■□□□□ 0.7
PACS1-201ENST00000320580 ARHGEF12Q9NZN5 1544 aa19.39■□□□□ 0.69
PACS1-201ENST00000320580 IL16Q14005 1332 aa19.39■□□□□ 0.69
PACS1-201ENST00000320580 CPLX1O14810 134 aa19.39■□□□□ 0.69
PACS1-201ENST00000320580 ADGRF5Q8IZF2 1346 aa19.39■□□□□ 0.69
PACS1-201ENST00000320580 BIN1O00499 593 aa19.39■□□□□ 0.69
PACS1-201ENST00000320580 CBFA2T2O43439 604 aa19.39■□□□□ 0.69
PACS1-201ENST00000320580 EIF2S2P20042 333 aaKnown RBP19.39■□□□□ 0.69
PACS1-201ENST00000320580 TDO2P48775 406 aa19.39■□□□□ 0.69
PACS1-201ENST00000320580 EVCP57679 992 aa19.39■□□□□ 0.69
PACS1-201ENST00000320580 FSD1Q9BTV5 496 aa19.39■□□□□ 0.69
PACS1-201ENST00000320580 ADGRL2O95490 1459 aa19.38■□□□□ 0.69
PACS1-201ENST00000320580 FBXO38Q6PIJ6 1188 aa19.38■□□□□ 0.69
PACS1-201ENST00000320580 MRPL50Q8N5N7 158 aaKnown RBP19.38■□□□□ 0.69
PACS1-201ENST00000320580 CCDC150Q8NCX0 1101 aa19.38■□□□□ 0.69
PACS1-201ENST00000320580 BANK1Q8NDB2 785 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms