RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 MIS18AQ9NYP9 233 aa10.44□□□□□ -0.74
PDLIM5-201ENST00000317968 EIF4A1P60842 406 aaKnown RBP10.44□□□□□ -0.74
PDLIM5-201ENST00000317968 HSCBQ8IWL3 235 aa10.44□□□□□ -0.74
PDLIM5-201ENST00000317968 GNL3LQ9NVN8 582 aaKnown RBP10.44□□□□□ -0.74
PDLIM5-201ENST00000317968 LRRCC1Q9C099 1032 aa10.44□□□□□ -0.74
PDLIM5-201ENST00000317968 CHD1LQ86WJ1 897 aa10.44□□□□□ -0.74
PDLIM5-201ENST00000317968 ANKRD44Q8N8A2 993 aa10.44□□□□□ -0.74
PDLIM5-201ENST00000317968 C20orf194Q5TEA3 1177 aa10.43□□□□□ -0.74
PDLIM5-201ENST00000317968 CDC45O75419 566 aa10.43□□□□□ -0.74
PDLIM5-201ENST00000317968 TOMM22Q9NS69 142 aa10.43□□□□□ -0.74
PDLIM5-201ENST00000317968 SURF6O75683 361 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-201ENST00000317968 ZBTB40Q9NUA8 1239 aa10.43□□□□□ -0.74
PDLIM5-201ENST00000317968 ABCC4O15439 1325 aa10.43□□□□□ -0.74
PDLIM5-201ENST00000317968 ABCC6O95255 1503 aa10.42□□□□□ -0.74
PDLIM5-201ENST00000317968 KIF1BPQ96EK5 621 aa10.42□□□□□ -0.74
PDLIM5-201ENST00000317968 ANKRD13DQ6ZTN6 518 aa10.42□□□□□ -0.74
PDLIM5-201ENST00000317968 C8orf37Q96NL8 207 aa10.42□□□□□ -0.74
PDLIM5-201ENST00000317968 JCADQ9P266 1359 aa10.42□□□□□ -0.74
PDLIM5-201ENST00000317968 TSPYL6Q8N831 410 aa10.42□□□□□ -0.74
PDLIM5-201ENST00000317968 AK7Q96M32 723 aa10.42□□□□□ -0.74
PDLIM5-201ENST00000317968 LNPKQ9C0E8 428 aa10.42□□□□□ -0.74
PDLIM5-201ENST00000317968 APBB1O00213 710 aa10.41□□□□□ -0.74
PDLIM5-201ENST00000317968 MARCH6O60337 910 aa10.41□□□□□ -0.74
PDLIM5-201ENST00000317968 C16orf71Q8IYS4 520 aaPredicted RBP10.41□□□□□ -0.74
PDLIM5-201ENST00000317968 NFATC2IPQ8NCF5 419 aa10.41□□□□□ -0.74
PDLIM5-201ENST00000317968 SMC5Q8IY18 1101 aa10.41□□□□□ -0.74
PDLIM5-201ENST00000317968 AKAP12Q02952 1782 aa10.41□□□□□ -0.74
PDLIM5-201ENST00000317968 TRIM6-TRIM34B2RNG4 842 aa10.41□□□□□ -0.74
PDLIM5-201ENST00000317968 TAOK2Q9UL54 1235 aa10.41□□□□□ -0.74
PDLIM5-201ENST00000317968 SYNE3Q6ZMZ3 975 aa10.41□□□□□ -0.74
PDLIM5-201ENST00000317968 KIF3AQ9Y496 699 aa10.41□□□□□ -0.74
PDLIM5-201ENST00000317968 SPATA31A6Q5VVP1 1343 aa10.41□□□□□ -0.74
PDLIM5-201ENST00000317968 GOLGA6L6A8MZA4 724 aa10.41□□□□□ -0.74
PDLIM5-201ENST00000317968 VSIG10Q8N0Z9 540 aa10.4□□□□□ -0.74
PDLIM5-201ENST00000317968 PI4KAP2A4QPH2 592 aa10.4□□□□□ -0.74
PDLIM5-201ENST00000317968 GOLGA6L4A6NEF3 574 aa10.4□□□□□ -0.74
PDLIM5-201ENST00000317968 PI4KAP1Q8N8J0 262 aa10.4□□□□□ -0.74
PDLIM5-201ENST00000317968 CRB1P82279 1406 aa10.4□□□□□ -0.74
PDLIM5-201ENST00000317968 SRGAP3O43295 1099 aa10.4□□□□□ -0.74
PDLIM5-201ENST00000317968 GIGYF1O75420 1035 aaPredicted RBP10.4□□□□□ -0.75
PDLIM5-201ENST00000317968 VPS53Q5VIR6 699 aa10.4□□□□□ -0.75
PDLIM5-201ENST00000317968 DDX17Q92841 729 aaKnown RBP10.4□□□□□ -0.75
PDLIM5-201ENST00000317968 CHPF2Q9P2E5 772 aa10.4□□□□□ -0.75
PDLIM5-201ENST00000317968 MYL6BP14649 208 aa10.39□□□□□ -0.75
PDLIM5-201ENST00000317968 ATP8B2P98198 1209 aa10.39□□□□□ -0.75
PDLIM5-201ENST00000317968 IPO9Q96P70 1041 aaKnown RBP10.39□□□□□ -0.75
PDLIM5-201ENST00000317968 PTCD1O75127 700 aaKnown RBP10.39□□□□□ -0.75
PDLIM5-201ENST00000317968 CNTROBQ8N137 903 aa10.39□□□□□ -0.75
PDLIM5-201ENST00000317968 LGR6Q9HBX8 967 aa10.39□□□□□ -0.75
PDLIM5-201ENST00000317968 CWC25Q9NXE8 425 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-201ENST00000317968 NOP58Q9Y2X3 529 aaKnown RBP10.39□□□□□ -0.75
PDLIM5-201ENST00000317968 TOPAZ1Q8N9V7 1692 aa10.39□□□□□ -0.75
PDLIM5-201ENST00000317968 ZBTB7BO15156 539 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-201ENST00000317968 PTMSP20962 102 aa10.39□□□□□ -0.75
PDLIM5-201ENST00000317968 MFAP1P55081 439 aaKnown RBP10.39□□□□□ -0.75
PDLIM5-201ENST00000317968 AKAP17AQ02040 695 aaKnown RBP10.39□□□□□ -0.75
PDLIM5-201ENST00000317968 BACH2Q9BYV9 841 aa10.39□□□□□ -0.75
PDLIM5-201ENST00000317968 DIAPH3Q9NSV4 1193 aa10.39□□□□□ -0.75
PDLIM5-201ENST00000317968 MAP3K2Q9Y2U5 619 aa10.38□□□□□ -0.75
PDLIM5-201ENST00000317968 DCTPP1Q9H773 170 aa10.38□□□□□ -0.75
PDLIM5-201ENST00000317968 ST18O60284 1047 aa10.38□□□□□ -0.75
PDLIM5-201ENST00000317968 PLBD2Q8NHP8 589 aa10.38□□□□□ -0.75
PDLIM5-201ENST00000317968 MAP2P11137 1827 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-201ENST00000317968 CCDC57Q2TAC2 916 aa10.37□□□□□ -0.75
PDLIM5-201ENST00000317968 TMOD2Q9NZR1 351 aa10.37□□□□□ -0.75
PDLIM5-201ENST00000317968 GRM8O00222 908 aa10.37□□□□□ -0.75
PDLIM5-201ENST00000317968 AKAP2Q9Y2D5 859 aa10.37□□□□□ -0.75
PDLIM5-201ENST00000317968 SLIT3O75094 1523 aa10.37□□□□□ -0.75
PDLIM5-201ENST00000317968 BMP2KLQ5H9B9 411 aa10.37□□□□□ -0.75
PDLIM5-201ENST00000317968 XAGE3Q8WTP9 111 aa10.37□□□□□ -0.75
PDLIM5-201ENST00000317968 ZNF772Q68DY9 489 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-201ENST00000317968 CEMIPQ8WUJ3 1361 aa10.37□□□□□ -0.75
PDLIM5-201ENST00000317968 GLRX3O76003 335 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-201ENST00000317968 SLC3A2P08195 630 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-201ENST00000317968 NUCB1Q02818 461 aa10.36□□□□□ -0.75
PDLIM5-201ENST00000317968 RNF20Q5VTR2 975 aa10.36□□□□□ -0.75
PDLIM5-201ENST00000317968 COPS6Q7L5N1 327 aa10.36□□□□□ -0.75
PDLIM5-201ENST00000317968 MYD88Q99836 296 aa10.36□□□□□ -0.75
PDLIM5-201ENST00000317968 CEP126Q9P2H0 1117 aa10.36□□□□□ -0.75
PDLIM5-201ENST00000317968 TRPC5Q9UL62 973 aaPredicted RBP10.36□□□□□ -0.75
PDLIM5-201ENST00000317968 RLBP1P12271 317 aa10.36□□□□□ -0.75
PDLIM5-201ENST00000317968 UNC5CLQ8IV45 518 aa10.36□□□□□ -0.75
PDLIM5-201ENST00000317968 F6X3S4 739 aa10.36□□□□□ -0.75
PDLIM5-201ENST00000317968 METTL22Q9BUU2 404 aaPredicted RBP10.36□□□□□ -0.75
PDLIM5-201ENST00000317968 BAG6P46379 1132 aa10.36□□□□□ -0.75
PDLIM5-201ENST00000317968 PPP1R42Q7Z4L9 355 aa10.36□□□□□ -0.75
PDLIM5-201ENST00000317968 CERKQ8TCT0 537 aa10.36□□□□□ -0.75
PDLIM5-201ENST00000317968 STK32BQ9NY57 414 aa10.36□□□□□ -0.75
PDLIM5-201ENST00000317968 TBC1D2BQ9UPU7 963 aa10.36□□□□□ -0.75
PDLIM5-201ENST00000317968 AXIN2Q9Y2T1 843 aa10.36□□□□□ -0.75
PDLIM5-201ENST00000317968 PCDHB15Q9Y5E8 787 aa10.36□□□□□ -0.75
PDLIM5-201ENST00000317968 ZNF496Q96IT1 587 aaPredicted RBP10.35□□□□□ -0.75
PDLIM5-201ENST00000317968 LRRFIP2Q9Y608 721 aaKnown RBP10.35□□□□□ -0.75
PDLIM5-201ENST00000317968 PARP10Q53GL7 1025 aa10.35□□□□□ -0.75
PDLIM5-201ENST00000317968 CCDC191Q8NCU4 936 aa10.35□□□□□ -0.75
PDLIM5-201ENST00000317968 SLC39A6Q13433 755 aa10.35□□□□□ -0.75
PDLIM5-201ENST00000317968 C1orf115Q9H7X2 142 aa10.35□□□□□ -0.75
PDLIM5-201ENST00000317968 RAD21O60216 631 aa10.35□□□□□ -0.75
PDLIM5-201ENST00000317968 ZKSCAN1P17029 563 aaPredicted RBP10.35□□□□□ -0.75
PDLIM5-201ENST00000317968 NRKQ7Z2Y5 1582 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms