RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 COL15A1P39059 1388 aa27■■□□□ 1.91
SERF1A-201ENST00000317633 GNAT3A8MTJ3 354 aa27■■□□□ 1.91
SERF1A-201ENST00000317633 POLRMTO00411 1230 aaKnown RBP27■■□□□ 1.91
SERF1A-201ENST00000317633 KCNA3P22001 575 aa27■■□□□ 1.91
SERF1A-201ENST00000317633 TEFQ10587 303 aa27■■□□□ 1.91
SERF1A-201ENST00000317633 DALRD3Q5D0E6 543 aaKnown RBP26.99■■□□□ 1.91
SERF1A-201ENST00000317633 CFAP53Q96M91 514 aa26.99■■□□□ 1.91
SERF1A-201ENST00000317633 ZBTB1Q9Y2K1 713 aa26.99■■□□□ 1.91
SERF1A-201ENST00000317633 STARD3NLO95772 234 aa26.98■■□□□ 1.91
SERF1A-201ENST00000317633 AFDNP55196 1824 aaKnown RBP26.96■■□□□ 1.91
SERF1A-201ENST00000317633 IL17REQ8NFR9 667 aa26.95■■□□□ 1.9
SERF1A-201ENST00000317633 TEX13AQ9BXU3 409 aaPredicted RBP26.95■■□□□ 1.9
SERF1A-201ENST00000317633 SIPA1L3O60292 1781 aaPredicted RBP26.94■■□□□ 1.9
SERF1A-201ENST00000317633 CANXP27824 592 aaKnown RBP26.94■■□□□ 1.9
SERF1A-201ENST00000317633 NFIXQ14938 502 aa26.94■■□□□ 1.9
SERF1A-201ENST00000317633 ZNF790Q6PG37 636 aa26.94■■□□□ 1.9
SERF1A-201ENST00000317633 A0A087WZG4 1122 aa26.93■■□□□ 1.9
SERF1A-201ENST00000317633 KIF3CO14782 793 aa26.93■■□□□ 1.9
SERF1A-201ENST00000317633 HSPA6P17066 643 aa26.93■■□□□ 1.9
SERF1A-201ENST00000317633 NUDCQ9Y266 331 aa26.93■■□□□ 1.9
SERF1A-201ENST00000317633 CHRNA5P30532 468 aa26.92■■□□□ 1.9
SERF1A-201ENST00000317633 NRXN2Q9P2S2 1712 aa26.91■■□□□ 1.9
SERF1A-201ENST00000317633 ZNF496Q96IT1 587 aaPredicted RBP26.91■■□□□ 1.9
SERF1A-201ENST00000317633 HEG1Q9ULI3 1381 aa26.91■■□□□ 1.9
SERF1A-201ENST00000317633 SERPINB2P05120 415 aa26.9■■□□□ 1.9
SERF1A-201ENST00000317633 PRKAR2BP31323 418 aa26.9■■□□□ 1.9
SERF1A-201ENST00000317633 C9orf131Q5VYM1 1079 aa26.9■■□□□ 1.9
SERF1A-201ENST00000317633 BCL2L12Q9HB09 334 aa26.9■■□□□ 1.9
SERF1A-201ENST00000317633 EIF5P55010 431 aaKnown RBP26.89■■□□□ 1.9
SERF1A-201ENST00000317633 FMNL2Q96PY5 1086 aa26.89■■□□□ 1.9
SERF1A-201ENST00000317633 RSPH6AQ9H0K4 717 aa26.88■■□□□ 1.89
SERF1A-201ENST00000317633 CEMIPQ8WUJ3 1361 aa26.87■■□□□ 1.89
SERF1A-201ENST00000317633 NPM2Q86SE8 214 aaKnown RBP26.87■■□□□ 1.89
SERF1A-201ENST00000317633 PHACTR3Q96KR7 559 aa26.87■■□□□ 1.89
SERF1A-201ENST00000317633 TOMM70O94826 608 aa26.86■■□□□ 1.89
SERF1A-201ENST00000317633 SBF1O95248 1867 aa26.86■■□□□ 1.89
SERF1A-201ENST00000317633 DLEC1Q9Y238 1755 aa26.85■■□□□ 1.89
SERF1A-201ENST00000317633 BTBD11A6QL63 1104 aa26.85■■□□□ 1.89
SERF1A-201ENST00000317633 IL6STP40189 918 aaPredicted RBP26.85■■□□□ 1.89
SERF1A-201ENST00000317633 U2AF1L5P0DN76 240 aaPredicted RBP26.84■■□□□ 1.89
SERF1A-201ENST00000317633 PPP2R1AP30153 589 aa26.84■■□□□ 1.89
SERF1A-201ENST00000317633 U2AF1Q01081 240 aaKnown RBP eCLIP26.84■■□□□ 1.89
SERF1A-201ENST00000317633 BICDL1Q6ZP65 573 aa26.84■■□□□ 1.89
SERF1A-201ENST00000317633 RTF1Q92541 710 aaKnown RBP26.84■■□□□ 1.89
SERF1A-201ENST00000317633 RNF181Q9P0P0 153 aa26.84■■□□□ 1.89
SERF1A-201ENST00000317633 ZNF330Q9Y3S2 320 aaPredicted RBP26.84■■□□□ 1.89
SERF1A-201ENST00000317633 H0YIN7 160 aa26.82■■□□□ 1.88
SERF1A-201ENST00000317633 NMRK2Q9NPI5 230 aa26.82■■□□□ 1.88
SERF1A-201ENST00000317633 KDM2BQ8NHM5 1336 aa26.82■■□□□ 1.88
SERF1A-201ENST00000317633 SCN7AQ01118 1682 aa26.82■■□□□ 1.88
SERF1A-201ENST00000317633 C2CD5Q86YS7 1000 aa26.81■■□□□ 1.88
SERF1A-201ENST00000317633 TTLL6Q8N841 843 aa26.81■■□□□ 1.88
SERF1A-201ENST00000317633 CEP350Q5VT06 3117 aa26.8■■□□□ 1.88
SERF1A-201ENST00000317633 C16orf71Q8IYS4 520 aaPredicted RBP26.8■■□□□ 1.88
SERF1A-201ENST00000317633 PDZRN3Q9UPQ7 1066 aa26.8■■□□□ 1.88
SERF1A-201ENST00000317633 TBC1D2BQ9UPU7 963 aa26.8■■□□□ 1.88
SERF1A-201ENST00000317633 TBC1D9BQ66K14 1250 aa26.79■■□□□ 1.88
SERF1A-201ENST00000317633 CARMIL3Q8ND23 1372 aa26.77■■□□□ 1.88
SERF1A-201ENST00000317633 A1BGP04217 495 aa26.77■■□□□ 1.88
SERF1A-201ENST00000317633 PDE6BP35913 854 aa26.77■■□□□ 1.88
SERF1A-201ENST00000317633 APLP1P51693 650 aa26.77■■□□□ 1.88
SERF1A-201ENST00000317633 ZC3H4Q9UPT8 1303 aaKnown RBP26.76■■□□□ 1.87
SERF1A-201ENST00000317633 KCNQ3O43525 872 aa26.76■■□□□ 1.87
SERF1A-201ENST00000317633 HTATSF1O43719 755 aaKnown RBP26.76■■□□□ 1.87
SERF1A-201ENST00000317633 LMNB1P20700 586 aa26.75■■□□□ 1.87
SERF1A-201ENST00000317633 MCM10Q7L590 875 aa26.75■■□□□ 1.87
SERF1A-201ENST00000317633 RBM46Q8TBY0 533 aaKnown RBP26.75■■□□□ 1.87
SERF1A-201ENST00000317633 SETDB2Q96T68 719 aa26.75■■□□□ 1.87
SERF1A-201ENST00000317633 BRIP1Q9BX63 1249 aa26.75■■□□□ 1.87
SERF1A-201ENST00000317633 ANKRD31Q8N7Z5 1873 aa26.74■■□□□ 1.87
SERF1A-201ENST00000317633 TNRC6CQ9HCJ0 1690 aaKnown RBP26.74■■□□□ 1.87
SERF1A-201ENST00000317633 NEFMP07197 916 aa26.74■■□□□ 1.87
SERF1A-201ENST00000317633 SNRPA1P09661 255 aaKnown RBP26.74■■□□□ 1.87
SERF1A-201ENST00000317633 RASSF7Q02833 373 aa26.74■■□□□ 1.87
SERF1A-201ENST00000317633 CCDC88AQ3V6T2 1871 aa26.74■■□□□ 1.87
SERF1A-201ENST00000317633 NPHP1O15259 732 aa26.73■■□□□ 1.87
SERF1A-201ENST00000317633 PRR5LQ6MZQ0 368 aa26.73■■□□□ 1.87
SERF1A-201ENST00000317633 DZIP3Q86Y13 1208 aaKnown RBP26.73■■□□□ 1.87
SERF1A-201ENST00000317633 USP16Q9Y5T5 823 aa26.73■■□□□ 1.87
SERF1A-201ENST00000317633 BCORQ6W2J9 1755 aa26.72■■□□□ 1.87
SERF1A-201ENST00000317633 CAMTA2O94983 1202 aa26.72■■□□□ 1.87
SERF1A-201ENST00000317633 ZNF622Q969S3 477 aaKnown RBP eCLIP26.72■■□□□ 1.87
SERF1A-201ENST00000317633 CNBD1Q8NA66 436 aa26.71■■□□□ 1.87
SERF1A-201ENST00000317633 RRAGCQ9HB90 399 aa26.71■■□□□ 1.87
SERF1A-201ENST00000317633 ST5P78524 1137 aa26.69■■□□□ 1.86
SERF1A-201ENST00000317633 FSTL1Q12841 308 aa26.69■■□□□ 1.86
SERF1A-201ENST00000317633 CLEC4GQ6UXB4 293 aa26.69■■□□□ 1.86
SERF1A-201ENST00000317633 ZNF652Q9Y2D9 606 aa26.69■■□□□ 1.86
SERF1A-201ENST00000317633 DCTN1Q14203 1278 aa26.68■■□□□ 1.86
SERF1A-201ENST00000317633 TAF7Q15545 349 aaPredicted RBP26.68■■□□□ 1.86
SERF1A-201ENST00000317633 CCDC24Q8N4L8 307 aa26.67■■□□□ 1.86
SERF1A-201ENST00000317633 COL11A2P13942 1736 aaPredicted RBP26.66■■□□□ 1.86
SERF1A-201ENST00000317633 TIAM2Q8IVF5 1701 aa26.66■■□□□ 1.86
SERF1A-201ENST00000317633 PRAMEF22A3QJZ6 481 aa26.66■■□□□ 1.86
SERF1A-201ENST00000317633 DLG5Q8TDM6 1919 aa26.66■■□□□ 1.86
SERF1A-201ENST00000317633 GLTPD2A6NH11 291 aa26.65■■□□□ 1.86
SERF1A-201ENST00000317633 NFKBIEO00221 500 aa26.65■■□□□ 1.86
SERF1A-201ENST00000317633 PIP4K2AP48426 406 aaPredicted RBP26.65■■□□□ 1.86
SERF1A-201ENST00000317633 CNKSR1Q969H4 720 aa26.65■■□□□ 1.86
SERF1A-201ENST00000317633 FER1L6Q2WGJ9 1857 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms