RNA–Protein interactions for RNA: ENST00000316881.8

TRIM25-201, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-201ENST00000316881 GRIN2AQ12879 1464 aa16.73■□□□□ 0.27
TRIM25-201ENST00000316881 FEZ1Q99689 392 aa16.73■□□□□ 0.27
TRIM25-201ENST00000316881 MCM4P33991 863 aa16.73■□□□□ 0.27
TRIM25-201ENST00000316881 MYO1BO43795 1136 aa16.72■□□□□ 0.27
TRIM25-201ENST00000316881 RARSP54136 660 aaKnown RBP16.72■□□□□ 0.27
TRIM25-201ENST00000316881 CABP5Q9NP86 173 aa16.72■□□□□ 0.27
TRIM25-201ENST00000316881 BAG3O95817 575 aa16.72■□□□□ 0.27
TRIM25-201ENST00000316881 CASTP20810 708 aaKnown RBP16.72■□□□□ 0.27
TRIM25-201ENST00000316881 SPTY2D1Q68D10 685 aaPredicted RBP16.72■□□□□ 0.27
TRIM25-201ENST00000316881 GRPEL1Q9HAV7 217 aa16.72■□□□□ 0.27
TRIM25-201ENST00000316881 HMGB1P09429 215 aaKnown RBP16.72■□□□□ 0.27
TRIM25-201ENST00000316881 ANKRD24Q8TF21 1146 aa16.72■□□□□ 0.27
TRIM25-201ENST00000316881 DNAJC5BQ9UF47 199 aa16.72■□□□□ 0.27
TRIM25-201ENST00000316881 PHAXQ9H814 394 aaKnown RBP16.71■□□□□ 0.27
TRIM25-201ENST00000316881 CWC25Q9NXE8 425 aaPredicted RBP16.71■□□□□ 0.27
TRIM25-201ENST00000316881 FAM135AQ9P2D6 1515 aa16.71■□□□□ 0.27
TRIM25-201ENST00000316881 TTF1Q15361 905 aaPredicted RBP16.71■□□□□ 0.27
TRIM25-201ENST00000316881 TMEM87AQ8NBN3 555 aa16.71■□□□□ 0.27
TRIM25-201ENST00000316881 NPHP3Q7Z494 1330 aa16.71■□□□□ 0.27
TRIM25-201ENST00000316881 ADGRF5Q8IZF2 1346 aa16.71■□□□□ 0.27
TRIM25-201ENST00000316881 FANCAO15360 1455 aa16.7■□□□□ 0.26
TRIM25-201ENST00000316881 ZNF213O14771 459 aa16.7■□□□□ 0.26
TRIM25-201ENST00000316881 HLA-DOAP06340 250 aa16.7■□□□□ 0.26
TRIM25-201ENST00000316881 SEPT7Q16181 437 aaKnown RBP16.7■□□□□ 0.26
TRIM25-201ENST00000316881 LDHAL6AQ6ZMR3 332 aa16.7■□□□□ 0.26
TRIM25-201ENST00000316881 TMEM266Q2M3C6 531 aa16.7■□□□□ 0.26
TRIM25-201ENST00000316881 MYCNP04198 464 aaPredicted RBP16.7■□□□□ 0.26
TRIM25-201ENST00000316881 NBPF6Q5VWK0 638 aa16.69■□□□□ 0.26
TRIM25-201ENST00000316881 NBPF5PQ86XG9 351 aaPredicted RBP16.69■□□□□ 0.26
TRIM25-201ENST00000316881 NBPF4Q96M43 638 aa16.69■□□□□ 0.26
TRIM25-201ENST00000316881 SNRPA1P09661 255 aaKnown RBP16.69■□□□□ 0.26
TRIM25-201ENST00000316881 DDX11Q96FC9 970 aa16.69■□□□□ 0.26
TRIM25-201ENST00000316881 SLC12A7Q9Y666 1083 aa16.69■□□□□ 0.26
TRIM25-201ENST00000316881 SMTNL1A8MU46 457 aa16.69■□□□□ 0.26
TRIM25-201ENST00000316881 EIF5P55010 431 aaKnown RBP16.69■□□□□ 0.26
TRIM25-201ENST00000316881 CETN2P41208 172 aa16.69■□□□□ 0.26
TRIM25-201ENST00000316881 SMARCC1Q92922 1105 aaPredicted RBP16.69■□□□□ 0.26
TRIM25-201ENST00000316881 SKIDA1Q1XH10 827 aa16.69■□□□□ 0.26
TRIM25-201ENST00000316881 CIZ1Q9ULV3 898 aaPredicted RBP16.69■□□□□ 0.26
TRIM25-201ENST00000316881 PTPRKQ15262 1439 aa16.68■□□□□ 0.26
TRIM25-201ENST00000316881 CHRNA2Q15822 529 aa16.68■□□□□ 0.26
TRIM25-201ENST00000316881 NSD2O96028 1365 aa16.68■□□□□ 0.26
TRIM25-201ENST00000316881 PRPF40BQ6NWY9 871 aaKnown RBP16.68■□□□□ 0.26
TRIM25-201ENST00000316881 MPHOSPH6Q99547 160 aaKnown RBP16.68■□□□□ 0.26
TRIM25-201ENST00000316881 CCDC8Q9H0W5 538 aaPredicted RBP16.68■□□□□ 0.26
TRIM25-201ENST00000316881 PTPRCP08575 1304 aa16.68■□□□□ 0.26
TRIM25-201ENST00000316881 GOLGA6L10A6NI86 522 aa16.68■□□□□ 0.26
TRIM25-201ENST00000316881 NUP62CLQ9H1M0 184 aa16.68■□□□□ 0.26
TRIM25-201ENST00000316881 CATIPQ7Z7H3 387 aa16.67■□□□□ 0.26
TRIM25-201ENST00000316881 ACEP12821 1306 aa16.67■□□□□ 0.26
TRIM25-201ENST00000316881 TSG101Q99816 390 aa16.67■□□□□ 0.26
TRIM25-201ENST00000316881 CCDC12Q8WUD4 166 aaPredicted RBP16.67■□□□□ 0.26
TRIM25-201ENST00000316881 UPF3BQ9BZI7 483 aaKnown RBP16.67■□□□□ 0.26
TRIM25-201ENST00000316881 DISP3Q9P2K9 1392 aa16.67■□□□□ 0.26
TRIM25-201ENST00000316881 DHX29Q7Z478 1369 aaKnown RBP16.67■□□□□ 0.26
TRIM25-201ENST00000316881 KIF20AO95235 890 aa16.67■□□□□ 0.26
TRIM25-201ENST00000316881 CCDC194A0A1B0GVG4 234 aa16.67■□□□□ 0.26
TRIM25-201ENST00000316881 FLIIQ13045 1269 aa16.67■□□□□ 0.26
TRIM25-201ENST00000316881 CCDC152Q4G0S7 254 aa16.67■□□□□ 0.26
TRIM25-201ENST00000316881 SSH1Q8WYL5 1049 aa16.67■□□□□ 0.26
TRIM25-201ENST00000316881 C14orf93Q9H972 538 aaKnown RBP16.67■□□□□ 0.26
TRIM25-201ENST00000316881 LRRFIP2Q9Y608 721 aaKnown RBP16.67■□□□□ 0.26
TRIM25-201ENST00000316881 GSTO1P78417 241 aa16.66■□□□□ 0.26
TRIM25-201ENST00000316881 PDE4BQ07343 736 aa16.66■□□□□ 0.26
TRIM25-201ENST00000316881 BAG4O95429 457 aaKnown RBP16.66■□□□□ 0.26
TRIM25-201ENST00000316881 SPC24Q8NBT2 197 aa16.66■□□□□ 0.26
TRIM25-201ENST00000316881 ZNF397Q8NF99 534 aaPredicted RBP16.66■□□□□ 0.26
TRIM25-201ENST00000316881 ZCRB1Q8TBF4 217 aaKnown RBP16.66■□□□□ 0.26
TRIM25-201ENST00000316881 MAP3K2Q9Y2U5 619 aa16.66■□□□□ 0.26
TRIM25-201ENST00000316881 NOS1P29475 1434 aa16.66■□□□□ 0.26
TRIM25-201ENST00000316881 IFIT3O14879 490 aaKnown RBP16.66■□□□□ 0.26
TRIM25-201ENST00000316881 TEX14Q8IWB6 1497 aa16.66■□□□□ 0.26
TRIM25-201ENST00000316881 F6X3S4 739 aa16.66■□□□□ 0.26
TRIM25-201ENST00000316881 SSR1P43307 286 aaKnown RBP16.66■□□□□ 0.26
TRIM25-201ENST00000316881 HDAC9Q9UKV0 1011 aa16.65■□□□□ 0.26
TRIM25-201ENST00000316881 THOC2Q8NI27 1593 aaKnown RBP16.65■□□□□ 0.26
TRIM25-201ENST00000316881 KIF5BP33176 963 aa16.65■□□□□ 0.26
TRIM25-201ENST00000316881 CCDC150Q8NCX0 1101 aa16.65■□□□□ 0.26
TRIM25-201ENST00000316881 ANKRD62A6NC57 917 aa16.65■□□□□ 0.26
TRIM25-201ENST00000316881 JAKMIP3Q5VZ66 844 aa16.65■□□□□ 0.26
TRIM25-201ENST00000316881 IQCEQ6IPM2 695 aa16.65■□□□□ 0.26
TRIM25-201ENST00000316881 CCDC191Q8NCU4 936 aa16.65■□□□□ 0.26
TRIM25-201ENST00000316881 TAF4BQ92750 862 aa16.65■□□□□ 0.26
TRIM25-201ENST00000316881 C8orf76Q96K31 380 aa16.65■□□□□ 0.26
TRIM25-201ENST00000316881 SETDB2Q96T68 719 aa16.64■□□□□ 0.25
TRIM25-201ENST00000316881 TTC21AQ8NDW8 1320 aa16.64■□□□□ 0.25
TRIM25-201ENST00000316881 AXDND1Q5T1B0 1012 aaPredicted RBP16.64■□□□□ 0.25
TRIM25-201ENST00000316881 SH2B1Q9NRF2 756 aaPredicted RBP16.64■□□□□ 0.25
TRIM25-201ENST00000316881 SPDYE4A6NLX3 237 aa16.64■□□□□ 0.25
TRIM25-201ENST00000316881 NLRP5P59047 1200 aa16.64■□□□□ 0.25
TRIM25-201ENST00000316881 SSRP1Q08945 709 aaKnown RBP16.64■□□□□ 0.25
TRIM25-201ENST00000316881 UQCRFS1P1P0C7P4 283 aa16.64■□□□□ 0.25
TRIM25-201ENST00000316881 C8orf37Q96NL8 207 aa16.64■□□□□ 0.25
TRIM25-201ENST00000316881 GOLGA8AA7E2F4 631 aa16.63■□□□□ 0.25
TRIM25-201ENST00000316881 GOLGA8BA8MQT2 603 aa16.63■□□□□ 0.25
TRIM25-201ENST00000316881 FGFR1OPO95684 399 aaKnown RBP16.63■□□□□ 0.25
TRIM25-201ENST00000316881 HMGN5P82970 282 aaKnown RBP16.63■□□□□ 0.25
TRIM25-201ENST00000316881 NBPF14Q5TI25 921 aa16.63■□□□□ 0.25
TRIM25-201ENST00000316881 URB2Q14146 1524 aaKnown RBP16.63■□□□□ 0.25
TRIM25-201ENST00000316881 SMARCA5O60264 1052 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms