RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 NLRP2Q9NX02 1062 aa18.14■□□□□ 0.49
CLK4-201ENST00000316308 HSPA2P54652 639 aa18.14■□□□□ 0.49
CLK4-201ENST00000316308 RABEP1Q15276 862 aa18.14■□□□□ 0.49
CLK4-201ENST00000316308 PA2G4Q9UQ80 394 aaKnown RBP18.14■□□□□ 0.49
CLK4-201ENST00000316308 POLA2Q14181 598 aa18.13■□□□□ 0.49
CLK4-201ENST00000316308 TUBGCP6Q96RT7 1819 aa18.13■□□□□ 0.49
CLK4-201ENST00000316308 CHMLP26374 656 aa18.13■□□□□ 0.49
CLK4-201ENST00000316308 NOL8Q76FK4 1167 aaKnown RBP18.13■□□□□ 0.49
CLK4-201ENST00000316308 ESYT1Q9BSJ8 1104 aa18.13■□□□□ 0.49
CLK4-201ENST00000316308 PANK2Q9BZ23 570 aa18.13■□□□□ 0.49
CLK4-201ENST00000316308 AMOTQ4VCS5 1084 aa18.12■□□□□ 0.49
CLK4-201ENST00000316308 RHPN1Q8TCX5 695 aa18.12■□□□□ 0.49
CLK4-201ENST00000316308 TMEM94Q12767 1356 aa18.12■□□□□ 0.49
CLK4-201ENST00000316308 PHRF1Q9P1Y6 1649 aaKnown RBP18.12■□□□□ 0.49
CLK4-201ENST00000316308 CASC1Q6TDU7 716 aa18.12■□□□□ 0.49
CLK4-201ENST00000316308 PXDNLA1KZ92 1463 aa18.11■□□□□ 0.49
CLK4-201ENST00000316308 NFATC2IPQ8NCF5 419 aa18.11■□□□□ 0.49
CLK4-201ENST00000316308 ANO2Q9NQ90 1003 aa18.11■□□□□ 0.49
CLK4-201ENST00000316308 NCAPD2Q15021 1401 aa18.11■□□□□ 0.49
CLK4-201ENST00000316308 PDIA6Q15084 440 aa18.1■□□□□ 0.49
CLK4-201ENST00000316308 JARID2Q92833 1246 aaPredicted RBP18.1■□□□□ 0.49
CLK4-201ENST00000316308 DBF4Q9UBU7 674 aaPredicted RBP18.1■□□□□ 0.49
CLK4-201ENST00000316308 N4BP2Q86UW6 1770 aaPredicted RBP18.1■□□□□ 0.49
CLK4-201ENST00000316308 REC8O95072 547 aa18.1■□□□□ 0.49
CLK4-201ENST00000316308 PI4K2BQ8TCG2 481 aa18.1■□□□□ 0.49
CLK4-201ENST00000316308 STAP2Q9UGK3 403 aa18.1■□□□□ 0.49
CLK4-201ENST00000316308 STRCP1A6NGW2 1772 aa18.1■□□□□ 0.49
CLK4-201ENST00000316308 XRCC6P12956 609 aaKnown RBP eCLIP18.09■□□□□ 0.49
CLK4-201ENST00000316308 MYL6BP14649 208 aa18.09■□□□□ 0.49
CLK4-201ENST00000316308 HEG1Q9ULI3 1381 aa18.09■□□□□ 0.49
CLK4-201ENST00000316308 NEK4P51957 841 aa18.09■□□□□ 0.49
CLK4-201ENST00000316308 KAZALD1Q96I82 304 aa18.09■□□□□ 0.49
CLK4-201ENST00000316308 KDM6AO15550 1401 aaPredicted RBP18.08■□□□□ 0.49
CLK4-201ENST00000316308 HOXB7P09629 217 aa18.08■□□□□ 0.49
CLK4-201ENST00000316308 FOXD4L5Q5VV16 416 aaPredicted RBP18.08■□□□□ 0.49
CLK4-201ENST00000316308 FOXD4L4Q8WXT5 416 aaPredicted RBP18.08■□□□□ 0.49
CLK4-201ENST00000316308 UPF3BQ9BZI7 483 aaKnown RBP18.08■□□□□ 0.49
CLK4-201ENST00000316308 MEGF6O75095 1541 aa18.08■□□□□ 0.48
CLK4-201ENST00000316308 DTNBO60941 627 aa18.08■□□□□ 0.48
CLK4-201ENST00000316308 CIZ1Q9ULV3 898 aaPredicted RBP18.08■□□□□ 0.48
CLK4-201ENST00000316308 MST1RQ04912 1400 aa18.08■□□□□ 0.48
CLK4-201ENST00000316308 ATF3P18847 181 aa18.07■□□□□ 0.48
CLK4-201ENST00000316308 KLHDC4Q8TBB5 520 aa18.07■□□□□ 0.48
CLK4-201ENST00000316308 GAS2L3Q86XJ1 694 aa18.07■□□□□ 0.48
CLK4-201ENST00000316308 C9orf78Q9NZ63 289 aaPredicted RBP18.07■□□□□ 0.48
CLK4-201ENST00000316308 KSR2Q6VAB6 950 aa18.06■□□□□ 0.48
CLK4-201ENST00000316308 ZDHHC9Q9Y397 364 aa18.06■□□□□ 0.48
CLK4-201ENST00000316308 FSD2A1L4K1 749 aa18.06■□□□□ 0.48
CLK4-201ENST00000316308 ZNF790Q6PG37 636 aa18.06■□□□□ 0.48
CLK4-201ENST00000316308 ZNF496Q96IT1 587 aaPredicted RBP18.06■□□□□ 0.48
CLK4-201ENST00000316308 CYP27B1O15528 508 aa18.05■□□□□ 0.48
CLK4-201ENST00000316308 CSB-PGBD3P0DP91 1061 aa18.05■□□□□ 0.48
CLK4-201ENST00000316308 RAPGEF4Q8WZA2 1011 aa18.05■□□□□ 0.48
CLK4-201ENST00000316308 SUCLG2Q96I99 432 aa18.05■□□□□ 0.48
CLK4-201ENST00000316308 USP16Q9Y5T5 823 aa18.05■□□□□ 0.48
CLK4-201ENST00000316308 NPHP3Q7Z494 1330 aa18.05■□□□□ 0.48
CLK4-201ENST00000316308 DDX11L8A8MPP1 907 aa18.05■□□□□ 0.48
CLK4-201ENST00000316308 LARP6Q9BRS8 491 aaKnown RBP18.05■□□□□ 0.48
CLK4-201ENST00000316308 ALS2Q96Q42 1657 aa18.05■□□□□ 0.48
CLK4-201ENST00000316308 BAG4O95429 457 aaKnown RBP18.04■□□□□ 0.48
CLK4-201ENST00000316308 IGKV5-2P06315 115 aa18.04■□□□□ 0.48
CLK4-201ENST00000316308 PHKG2P15735 406 aa18.04■□□□□ 0.48
CLK4-201ENST00000316308 SLC52A2Q9HAB3 445 aa18.04■□□□□ 0.48
CLK4-201ENST00000316308 OS9Q13438 667 aaPredicted RBP18.03■□□□□ 0.48
CLK4-201ENST00000316308 KIF1BPQ96EK5 621 aa18.03■□□□□ 0.48
CLK4-201ENST00000316308 BICC1Q9H694 974 aaKnown RBP18.03■□□□□ 0.48
CLK4-201ENST00000316308 SIPA1L3O60292 1781 aaPredicted RBP18.03■□□□□ 0.48
CLK4-201ENST00000316308 GOLGA6L3A6NEY3 463 aa18.03■□□□□ 0.48
CLK4-201ENST00000316308 ST18O60284 1047 aa18.03■□□□□ 0.48
CLK4-201ENST00000316308 TMX3Q96JJ7 454 aa18.03■□□□□ 0.48
CLK4-201ENST00000316308 SIL1Q9H173 461 aa18.03■□□□□ 0.48
CLK4-201ENST00000316308 SPG7Q9UQ90 795 aa18.03■□□□□ 0.48
CLK4-201ENST00000316308 CAMTA1Q9Y6Y1 1673 aa18.03■□□□□ 0.48
CLK4-201ENST00000316308 EPHA10Q5JZY3 1008 aa18.02■□□□□ 0.48
CLK4-201ENST00000316308 GBP4Q96PP9 640 aa18.02■□□□□ 0.48
CLK4-201ENST00000316308 CYP2E1P05181 493 aaPredicted RBP18.02■□□□□ 0.47
CLK4-201ENST00000316308 CWC27Q6UX04 472 aaKnown RBP18.02■□□□□ 0.47
CLK4-201ENST00000316308 RAB11FIP3O75154 756 aa18.01■□□□□ 0.47
CLK4-201ENST00000316308 MCTP1Q6DN14 999 aa18.01■□□□□ 0.47
CLK4-201ENST00000316308 XAGE3Q8WTP9 111 aa18.01■□□□□ 0.47
CLK4-201ENST00000316308 TLR7Q9NYK1 1049 aaKnown RBP18.01■□□□□ 0.47
CLK4-201ENST00000316308 C5P01031 1676 aa18.01■□□□□ 0.47
CLK4-201ENST00000316308 COPS6Q7L5N1 327 aa18.01■□□□□ 0.47
CLK4-201ENST00000316308 DDX21Q9NR30 783 aaKnown RBP eCLIP18.01■□□□□ 0.47
CLK4-201ENST00000316308 CPA1P15085 419 aa18■□□□□ 0.47
CLK4-201ENST00000316308 RASEFQ8IZ41 740 aa18■□□□□ 0.47
CLK4-201ENST00000316308 SASH1O94885 1247 aa18■□□□□ 0.47
CLK4-201ENST00000316308 TATP17735 454 aaPredicted RBP18■□□□□ 0.47
CLK4-201ENST00000316308 COL9A3Q14050 684 aaPredicted RBP18■□□□□ 0.47
CLK4-201ENST00000316308 GRM8O00222 908 aa17.99■□□□□ 0.47
CLK4-201ENST00000316308 RIC3Q7Z5B4 369 aa17.99■□□□□ 0.47
CLK4-201ENST00000316308 DDX54Q8TDD1 881 aaKnown RBP17.99■□□□□ 0.47
CLK4-201ENST00000316308 CCDC8Q9H0W5 538 aaPredicted RBP17.99■□□□□ 0.47
CLK4-201ENST00000316308 HYPKQ9NX55 129 aa17.99■□□□□ 0.47
CLK4-201ENST00000316308 MTX1Q13505 466 aa17.98■□□□□ 0.47
CLK4-201ENST00000316308 MYD88Q99836 296 aa17.98■□□□□ 0.47
CLK4-201ENST00000316308 COL18A1P39060 1754 aa17.98■□□□□ 0.47
CLK4-201ENST00000316308 FOXD4L6Q3SYB3 417 aaPredicted RBP17.98■□□□□ 0.47
CLK4-201ENST00000316308 FOXD4L3Q6VB84 417 aaPredicted RBP17.98■□□□□ 0.47
CLK4-201ENST00000316308 LRP10Q7Z4F1 713 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms