RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 IL17REQ8NFR9 667 aa23.55■■□□□ 1.36
EXOSC4-201ENST00000316052 CHRNA5P30532 468 aa23.54■■□□□ 1.36
EXOSC4-201ENST00000316052 NARFQ9UHQ1 456 aa23.54■■□□□ 1.36
EXOSC4-201ENST00000316052 ARFGEF1Q9Y6D6 1849 aa23.54■■□□□ 1.36
EXOSC4-201ENST00000316052 UBR2Q8IWV8 1755 aa23.53■■□□□ 1.36
EXOSC4-201ENST00000316052 BCL2L12Q9HB09 334 aa23.53■■□□□ 1.36
EXOSC4-201ENST00000316052 NFIXQ14938 502 aa23.52■■□□□ 1.36
EXOSC4-201ENST00000316052 DALRD3Q5D0E6 543 aaKnown RBP23.52■■□□□ 1.36
EXOSC4-201ENST00000316052 COL15A1P39059 1388 aa23.52■■□□□ 1.36
EXOSC4-201ENST00000316052 GNAT3A8MTJ3 354 aa23.51■■□□□ 1.35
EXOSC4-201ENST00000316052 AFDNP55196 1824 aaKnown RBP23.51■■□□□ 1.35
EXOSC4-201ENST00000316052 HSPA6P17066 643 aa23.5■■□□□ 1.35
EXOSC4-201ENST00000316052 CANXP27824 592 aaKnown RBP23.5■■□□□ 1.35
EXOSC4-201ENST00000316052 GAS2L2Q8NHY3 880 aa23.5■■□□□ 1.35
EXOSC4-201ENST00000316052 ZNF496Q96IT1 587 aaPredicted RBP23.5■■□□□ 1.35
EXOSC4-201ENST00000316052 PHACTR3Q96KR7 559 aa23.5■■□□□ 1.35
EXOSC4-201ENST00000316052 C9orf131Q5VYM1 1079 aa23.49■■□□□ 1.35
EXOSC4-201ENST00000316052 TTC5Q8N0Z6 440 aa23.49■■□□□ 1.35
EXOSC4-201ENST00000316052 STARD3NLO95772 234 aa23.48■■□□□ 1.35
EXOSC4-201ENST00000316052 EIF5P55010 431 aaKnown RBP23.48■■□□□ 1.35
EXOSC4-201ENST00000316052 TEFQ10587 303 aa23.48■■□□□ 1.35
EXOSC4-201ENST00000316052 ZNF790Q6PG37 636 aa23.48■■□□□ 1.35
EXOSC4-201ENST00000316052 SIPA1L3O60292 1781 aaPredicted RBP23.47■■□□□ 1.35
EXOSC4-201ENST00000316052 SERPINB2P05120 415 aa23.46■■□□□ 1.35
EXOSC4-201ENST00000316052 NMRK2Q9NPI5 230 aa23.46■■□□□ 1.35
EXOSC4-201ENST00000316052 NRXN2Q9P2S2 1712 aa23.45■■□□□ 1.34
EXOSC4-201ENST00000316052 HEG1Q9ULI3 1381 aa23.45■■□□□ 1.34
EXOSC4-201ENST00000316052 PRKAR2BP31323 418 aa23.45■■□□□ 1.34
EXOSC4-201ENST00000316052 RSPH6AQ9H0K4 717 aa23.45■■□□□ 1.34
EXOSC4-201ENST00000316052 SBF1O95248 1867 aa23.45■■□□□ 1.34
EXOSC4-201ENST00000316052 KCNQ3O43525 872 aa23.44■■□□□ 1.34
EXOSC4-201ENST00000316052 CEMIPQ8WUJ3 1361 aa23.43■■□□□ 1.34
EXOSC4-201ENST00000316052 BICDL1Q6ZP65 573 aa23.43■■□□□ 1.34
EXOSC4-201ENST00000316052 CFAP53Q96M91 514 aa23.42■■□□□ 1.34
EXOSC4-201ENST00000316052 TEX13AQ9BXU3 409 aaPredicted RBP23.42■■□□□ 1.34
EXOSC4-201ENST00000316052 A0A087WZG4 1122 aa23.41■■□□□ 1.34
EXOSC4-201ENST00000316052 TOMM70O94826 608 aa23.41■■□□□ 1.34
EXOSC4-201ENST00000316052 A1BGP04217 495 aa23.41■■□□□ 1.34
EXOSC4-201ENST00000316052 PPP2R1AP30153 589 aa23.41■■□□□ 1.34
EXOSC4-201ENST00000316052 RNF181Q9P0P0 153 aa23.41■■□□□ 1.34
EXOSC4-201ENST00000316052 TBC1D2BQ9UPU7 963 aa23.41■■□□□ 1.34
EXOSC4-201ENST00000316052 TBC1D9BQ66K14 1250 aa23.4■■□□□ 1.34
EXOSC4-201ENST00000316052 FMNL2Q96PY5 1086 aa23.4■■□□□ 1.34
EXOSC4-201ENST00000316052 CARMIL3Q8ND23 1372 aa23.4■■□□□ 1.34
EXOSC4-201ENST00000316052 ZNF330Q9Y3S2 320 aaPredicted RBP23.39■■□□□ 1.33
EXOSC4-201ENST00000316052 BTBD11A6QL63 1104 aa23.38■■□□□ 1.33
EXOSC4-201ENST00000316052 U2AF1L5P0DN76 240 aaPredicted RBP23.38■■□□□ 1.33
EXOSC4-201ENST00000316052 IL6STP40189 918 aaPredicted RBP23.38■■□□□ 1.33
EXOSC4-201ENST00000316052 U2AF1Q01081 240 aaKnown RBP eCLIP23.38■■□□□ 1.33
EXOSC4-201ENST00000316052 C2CD5Q86YS7 1000 aa23.38■■□□□ 1.33
EXOSC4-201ENST00000316052 NUDCQ9Y266 331 aa23.38■■□□□ 1.33
EXOSC4-201ENST00000316052 PRELPP51888 382 aa23.37■■□□□ 1.33
EXOSC4-201ENST00000316052 RASSF7Q02833 373 aa23.37■■□□□ 1.33
EXOSC4-201ENST00000316052 DLEC1Q9Y238 1755 aa23.37■■□□□ 1.33
EXOSC4-201ENST00000316052 TTLL6Q8N841 843 aa23.36■■□□□ 1.33
EXOSC4-201ENST00000316052 PRAMEF22A3QJZ6 481 aa23.35■■□□□ 1.33
EXOSC4-201ENST00000316052 H0YIN7 160 aa23.35■■□□□ 1.33
EXOSC4-201ENST00000316052 MCM10Q7L590 875 aa23.35■■□□□ 1.33
EXOSC4-201ENST00000316052 CCDC24Q8N4L8 307 aa23.35■■□□□ 1.33
EXOSC4-201ENST00000316052 USP16Q9Y5T5 823 aa23.35■■□□□ 1.33
EXOSC4-201ENST00000316052 ANKRD31Q8N7Z5 1873 aa23.34■■□□□ 1.33
EXOSC4-201ENST00000316052 CAMTA2O94983 1202 aa23.34■■□□□ 1.33
EXOSC4-201ENST00000316052 RRAGCQ9HB90 399 aa23.34■■□□□ 1.33
EXOSC4-201ENST00000316052 SCN7AQ01118 1682 aa23.33■■□□□ 1.33
EXOSC4-201ENST00000316052 PIP4K2AP48426 406 aaPredicted RBP23.33■■□□□ 1.33
EXOSC4-201ENST00000316052 APLP1P51693 650 aa23.33■■□□□ 1.33
EXOSC4-201ENST00000316052 DCTN1Q14203 1278 aa23.33■■□□□ 1.33
EXOSC4-201ENST00000316052 PRR5LQ6MZQ0 368 aa23.33■■□□□ 1.33
EXOSC4-201ENST00000316052 KDM2BQ8NHM5 1336 aa23.33■■□□□ 1.32
EXOSC4-201ENST00000316052 CCDC88AQ3V6T2 1871 aa23.32■■□□□ 1.32
EXOSC4-201ENST00000316052 RBM46Q8TBY0 533 aaKnown RBP23.32■■□□□ 1.32
EXOSC4-201ENST00000316052 BRIP1Q9BX63 1249 aa23.32■■□□□ 1.32
EXOSC4-201ENST00000316052 LMNB1P20700 586 aa23.31■■□□□ 1.32
EXOSC4-201ENST00000316052 RTF1Q92541 710 aaKnown RBP23.31■■□□□ 1.32
EXOSC4-201ENST00000316052 NFKBIEO00221 500 aa23.3■■□□□ 1.32
EXOSC4-201ENST00000316052 C16orf71Q8IYS4 520 aaPredicted RBP23.3■■□□□ 1.32
EXOSC4-201ENST00000316052 DNAJC5GQ8N7S2 189 aa23.3■■□□□ 1.32
EXOSC4-201ENST00000316052 ZNF622Q969S3 477 aaKnown RBP eCLIP23.3■■□□□ 1.32
EXOSC4-201ENST00000316052 SETDB2Q96T68 719 aa23.3■■□□□ 1.32
EXOSC4-201ENST00000316052 NPM2Q86SE8 214 aaKnown RBP23.29■■□□□ 1.32
EXOSC4-201ENST00000316052 DZIP3Q86Y13 1208 aaKnown RBP23.29■■□□□ 1.32
EXOSC4-201ENST00000316052 SNRPA1P09661 255 aaKnown RBP23.28■■□□□ 1.32
EXOSC4-201ENST00000316052 PDE6BP35913 854 aa23.28■■□□□ 1.32
EXOSC4-201ENST00000316052 HTATSF1O43719 755 aaKnown RBP23.27■■□□□ 1.32
EXOSC4-201ENST00000316052 COL11A2P13942 1736 aaPredicted RBP23.27■■□□□ 1.32
EXOSC4-201ENST00000316052 ZC3H4Q9UPT8 1303 aaKnown RBP23.27■■□□□ 1.32
EXOSC4-201ENST00000316052 PCNTO95613 3336 aa23.26■■□□□ 1.31
EXOSC4-201ENST00000316052 CNBD1Q8NA66 436 aa23.26■■□□□ 1.31
EXOSC4-201ENST00000316052 MIS18AQ9NYP9 233 aa23.26■■□□□ 1.31
EXOSC4-201ENST00000316052 ZNF219Q9P2Y4 722 aaPredicted RBP23.26■■□□□ 1.31
EXOSC4-201ENST00000316052 PDZRN3Q9UPQ7 1066 aa23.26■■□□□ 1.31
EXOSC4-201ENST00000316052 BCORQ6W2J9 1755 aa23.25■■□□□ 1.31
EXOSC4-201ENST00000316052 NBPF26B4DH59 902 aa23.25■■□□□ 1.31
EXOSC4-201ENST00000316052 C21orf2O43822 256 aa23.25■■□□□ 1.31
EXOSC4-201ENST00000316052 FSTL1Q12841 308 aa23.25■■□□□ 1.31
EXOSC4-201ENST00000316052 NBPF10Q6P3W6 841 aaKnown RBP23.25■■□□□ 1.31
EXOSC4-201ENST00000316052 NBPF15Q8N660 670 aa23.25■■□□□ 1.31
EXOSC4-201ENST00000316052 TNRC6CQ9HCJ0 1690 aaKnown RBP23.25■■□□□ 1.31
EXOSC4-201ENST00000316052 GLTPD2A6NH11 291 aa23.24■■□□□ 1.31
EXOSC4-201ENST00000316052 HTRA3P83110 453 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms