RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 NBPF26B4DH59 902 aa8.75□□□□□ -1.01
LYSMD3-201ENST00000315948 NBPF14Q5TI25 921 aa8.75□□□□□ -1.01
LYSMD3-201ENST00000315948 NBPF10Q6P3W6 841 aaKnown RBP8.75□□□□□ -1.01
LYSMD3-201ENST00000315948 NBPF15Q8N660 670 aa8.75□□□□□ -1.01
LYSMD3-201ENST00000315948 KCNQ4P56696 695 aa8.75□□□□□ -1.01
LYSMD3-201ENST00000315948 TTC5Q8N0Z6 440 aa8.75□□□□□ -1.01
LYSMD3-201ENST00000315948 ACSBG1Q96GR2 724 aa8.75□□□□□ -1.01
LYSMD3-201ENST00000315948 CARD10Q9BWT7 1032 aa8.75□□□□□ -1.01
LYSMD3-201ENST00000315948 DBF4Q9UBU7 674 aaPredicted RBP8.75□□□□□ -1.01
LYSMD3-201ENST00000315948 CCT4P50991 539 aaKnown RBP8.75□□□□□ -1.01
LYSMD3-201ENST00000315948 NBR1Q14596 966 aa8.75□□□□□ -1.01
LYSMD3-201ENST00000315948 PLEKHM2Q8IWE5 1019 aa8.75□□□□□ -1.01
LYSMD3-201ENST00000315948 ABCA3Q99758 1704 aa8.74□□□□□ -1.01
LYSMD3-201ENST00000315948 UBAP1LF5GYI3 381 aa8.74□□□□□ -1.01
LYSMD3-201ENST00000315948 GNAI2P04899 355 aa8.74□□□□□ -1.01
LYSMD3-201ENST00000315948 IGKV5-2P06315 115 aa8.74□□□□□ -1.01
LYSMD3-201ENST00000315948 TTLL7Q6ZT98 887 aa8.74□□□□□ -1.01
LYSMD3-201ENST00000315948 SMIM5Q71RC9 77 aa8.74□□□□□ -1.01
LYSMD3-201ENST00000315948 PPP1R42Q7Z4L9 355 aa8.74□□□□□ -1.01
LYSMD3-201ENST00000315948 SPRYD3Q8NCJ5 442 aa8.74□□□□□ -1.01
LYSMD3-201ENST00000315948 SRCIN1Q9C0H9 1055 aa8.74□□□□□ -1.01
LYSMD3-201ENST00000315948 AAMPQ13685 434 aa8.74□□□□□ -1.01
LYSMD3-201ENST00000315948 PTF1AQ7RTS3 328 aa8.74□□□□□ -1.01
LYSMD3-201ENST00000315948 LRP10Q7Z4F1 713 aa8.74□□□□□ -1.01
LYSMD3-201ENST00000315948 ARXQ96QS3 562 aa8.74□□□□□ -1.01
LYSMD3-201ENST00000315948 NOP58Q9Y2X3 529 aaKnown RBP8.74□□□□□ -1.01
LYSMD3-201ENST00000315948 CCDC9Q9Y3X0 531 aaKnown RBP8.74□□□□□ -1.01
LYSMD3-201ENST00000315948 SOS1Q07889 1333 aaPredicted RBP8.74□□□□□ -1.01
LYSMD3-201ENST00000315948 MAP4K4O95819 1239 aaPredicted RBP8.74□□□□□ -1.01
LYSMD3-201ENST00000315948 UBTFL1P0CB47 393 aaPredicted RBP8.74□□□□□ -1.01
LYSMD3-201ENST00000315948 PIGBQ92521 554 aa8.74□□□□□ -1.01
LYSMD3-201ENST00000315948 C5P01031 1676 aa8.74□□□□□ -1.01
LYSMD3-201ENST00000315948 KAZALD1Q96I82 304 aa8.74□□□□□ -1.01
LYSMD3-201ENST00000315948 NHSL1Q5SYE7 1610 aa8.74□□□□□ -1.01
LYSMD3-201ENST00000315948 EPHA10Q5JZY3 1008 aa8.73□□□□□ -1.01
LYSMD3-201ENST00000315948 MYD88Q99836 296 aa8.73□□□□□ -1.01
LYSMD3-201ENST00000315948 PCDH11XQ9BZA7 1347 aa8.73□□□□□ -1.01
LYSMD3-201ENST00000315948 PCDH11YQ9BZA8 1340 aa8.73□□□□□ -1.01
LYSMD3-201ENST00000315948 SRGAP3O43295 1099 aa8.73□□□□□ -1.01
LYSMD3-201ENST00000315948 NUTM1Q86Y26 1132 aa8.73□□□□□ -1.01
LYSMD3-201ENST00000315948 SLC4A9Q96Q91 983 aa8.73□□□□□ -1.01
LYSMD3-201ENST00000315948 BABAM1Q9NWV8 329 aa8.73□□□□□ -1.01
LYSMD3-201ENST00000315948 ZBTB3Q9H5J0 574 aa8.73□□□□□ -1.01
LYSMD3-201ENST00000315948 RIC3Q7Z5B4 369 aa8.72□□□□□ -1.01
LYSMD3-201ENST00000315948 GCC1Q96CN9 775 aa8.72□□□□□ -1.01
LYSMD3-201ENST00000315948 C8orf37Q96NL8 207 aa8.72□□□□□ -1.01
LYSMD3-201ENST00000315948 RBM42Q9BTD8 480 aaKnown RBP8.72□□□□□ -1.01
LYSMD3-201ENST00000315948 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.72□□□□□ -1.01
LYSMD3-201ENST00000315948 SUCLG2Q96I99 432 aa8.72□□□□□ -1.01
LYSMD3-201ENST00000315948 SIL1Q9H173 461 aa8.72□□□□□ -1.01
LYSMD3-201ENST00000315948 DDX21Q9NR30 783 aaKnown RBP eCLIP8.72□□□□□ -1.01
LYSMD3-201ENST00000315948 ZBTB47Q9UFB7 747 aaPredicted RBP8.72□□□□□ -1.01
LYSMD3-201ENST00000315948 KSR2Q6VAB6 950 aa8.72□□□□□ -1.01
LYSMD3-201ENST00000315948 RPAP2Q8IXW5 612 aaPredicted RBP8.72□□□□□ -1.01
LYSMD3-201ENST00000315948 SIPA1L3O60292 1781 aaPredicted RBP8.72□□□□□ -1.01
LYSMD3-201ENST00000315948 SCN11AQ9UI33 1791 aa8.71□□□□□ -1.01
LYSMD3-201ENST00000315948 SNRPA1P09661 255 aaKnown RBP8.71□□□□□ -1.01
LYSMD3-201ENST00000315948 UNC5CLQ8IV45 518 aa8.71□□□□□ -1.01
LYSMD3-201ENST00000315948 FMNL2Q96PY5 1086 aa8.71□□□□□ -1.01
LYSMD3-201ENST00000315948 C9orf78Q9NZ63 289 aaPredicted RBP8.71□□□□□ -1.01
LYSMD3-201ENST00000315948 KCNQ2O43526 872 aa8.71□□□□□ -1.01
LYSMD3-201ENST00000315948 SURF6O75683 361 aaKnown RBP8.71□□□□□ -1.01
LYSMD3-201ENST00000315948 PRIM1P49642 420 aaKnown RBP8.71□□□□□ -1.01
LYSMD3-201ENST00000315948 TBC1D9Q6ZT07 1266 aa8.71□□□□□ -1.01
LYSMD3-201ENST00000315948 DNAJC10Q8IXB1 793 aa8.71□□□□□ -1.01
LYSMD3-201ENST00000315948 SYNE4Q8N205 404 aa8.71□□□□□ -1.01
LYSMD3-201ENST00000315948 CCDC85AQ96PX6 553 aaPredicted RBP8.71□□□□□ -1.02
LYSMD3-201ENST00000315948 BICC1Q9H694 974 aaKnown RBP8.71□□□□□ -1.02
LYSMD3-201ENST00000315948 ATP8B2P98198 1209 aa8.71□□□□□ -1.02
LYSMD3-201ENST00000315948 COL16A1Q07092 1604 aaPredicted RBP8.7□□□□□ -1.02
LYSMD3-201ENST00000315948 HOXB7P09629 217 aa8.7□□□□□ -1.02
LYSMD3-201ENST00000315948 FAM98CQ17RN3 349 aaKnown RBP8.7□□□□□ -1.02
LYSMD3-201ENST00000315948 ERICH6Q7L0X2 663 aa8.7□□□□□ -1.02
LYSMD3-201ENST00000315948 IL25Q9H293 177 aa8.7□□□□□ -1.02
LYSMD3-201ENST00000315948 ATG3Q9NT62 314 aa8.7□□□□□ -1.02
LYSMD3-201ENST00000315948 TMOD3Q9NYL9 352 aa8.7□□□□□ -1.02
LYSMD3-201ENST00000315948 GNAI3P08754 354 aa8.7□□□□□ -1.02
LYSMD3-201ENST00000315948 SDSP20132 328 aa8.7□□□□□ -1.02
LYSMD3-201ENST00000315948 ANKRD13DQ6ZTN6 518 aa8.7□□□□□ -1.02
LYSMD3-201ENST00000315948 UBE3BQ7Z3V4 1068 aa8.69□□□□□ -1.02
LYSMD3-201ENST00000315948 HYPKQ9NX55 129 aa8.69□□□□□ -1.02
LYSMD3-201ENST00000315948 ADAMTS7Q9UKP4 1686 aa8.69□□□□□ -1.02
LYSMD3-201ENST00000315948 SHANK3Q9BYB0 1731 aa8.69□□□□□ -1.02
LYSMD3-201ENST00000315948 GLI3P10071 1580 aa8.69□□□□□ -1.02
LYSMD3-201ENST00000315948 PKD1L3Q7Z443 1732 aa8.69□□□□□ -1.02
LYSMD3-201ENST00000315948 NEURL1BA8MQ27 555 aa8.69□□□□□ -1.02
LYSMD3-201ENST00000315948 MYT1Q01538 1121 aa8.69□□□□□ -1.02
LYSMD3-201ENST00000315948 NDUFB9Q9Y6M9 179 aa8.69□□□□□ -1.02
LYSMD3-201ENST00000315948 TOGARAM1Q9Y4F4 1720 aa8.69□□□□□ -1.02
LYSMD3-201ENST00000315948 MARCH10Q8NA82 808 aaPredicted RBP8.68□□□□□ -1.02
LYSMD3-201ENST00000315948 TBC1D32Q96NH3 1257 aa8.68□□□□□ -1.02
LYSMD3-201ENST00000315948 GRM8O00222 908 aa8.68□□□□□ -1.02
LYSMD3-201ENST00000315948 CD2BP2O95400 341 aaKnown RBP8.68□□□□□ -1.02
LYSMD3-201ENST00000315948 TTC22Q5TAA0 569 aa8.68□□□□□ -1.02
LYSMD3-201ENST00000315948 SLKQ9H2G2 1235 aaPredicted RBP8.68□□□□□ -1.02
LYSMD3-201ENST00000315948 PDE1AP54750 535 aa8.68□□□□□ -1.02
LYSMD3-201ENST00000315948 NKX1-1Q15270 411 aaPredicted RBP8.68□□□□□ -1.02
LYSMD3-201ENST00000315948 BMP2KLQ5H9B9 411 aa8.68□□□□□ -1.02
LYSMD3-201ENST00000315948 TLR7Q9NYK1 1049 aaKnown RBP8.68□□□□□ -1.02
LYSMD3-201ENST00000315948 EXOC5O00471 708 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms