RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 DDR1Q08345 913 aa19.41■□□□□ 0.7
PPP1CA-201ENST00000312989 EIF5P55010 431 aaKnown RBP19.4■□□□□ 0.7
PPP1CA-201ENST00000312989 RTF1Q92541 710 aaKnown RBP19.4■□□□□ 0.7
PPP1CA-201ENST00000312989 FMNL2Q96PY5 1086 aa19.4■□□□□ 0.7
PPP1CA-201ENST00000312989 PXDNLA1KZ92 1463 aa19.4■□□□□ 0.7
PPP1CA-201ENST00000312989 THUMPD2Q9BTF0 503 aaKnown RBP19.39■□□□□ 0.69
PPP1CA-201ENST00000312989 KIF13BQ9NQT8 1826 aa19.38■□□□□ 0.69
PPP1CA-201ENST00000312989 TM4SF1P30408 202 aa19.38■□□□□ 0.69
PPP1CA-201ENST00000312989 USPL1Q5W0Q7 1092 aa19.38■□□□□ 0.69
PPP1CA-201ENST00000312989 NARFQ9UHQ1 456 aa19.38■□□□□ 0.69
PPP1CA-201ENST00000312989 DLG5Q8TDM6 1919 aa19.37■□□□□ 0.69
PPP1CA-201ENST00000312989 USP16Q9Y5T5 823 aa19.37■□□□□ 0.69
PPP1CA-201ENST00000312989 CANXP27824 592 aaKnown RBP19.36■□□□□ 0.69
PPP1CA-201ENST00000312989 TAF7Q15545 349 aaPredicted RBP19.36■□□□□ 0.69
PPP1CA-201ENST00000312989 MIS18AQ9NYP9 233 aa19.36■□□□□ 0.69
PPP1CA-201ENST00000312989 POLRMTO00411 1230 aaKnown RBP19.35■□□□□ 0.69
PPP1CA-201ENST00000312989 STARD3NLO95772 234 aa19.35■□□□□ 0.69
PPP1CA-201ENST00000312989 A1BGP04217 495 aa19.35■□□□□ 0.69
PPP1CA-201ENST00000312989 YY1P25490 414 aa19.35■□□□□ 0.69
PPP1CA-201ENST00000312989 TEX13AQ9BXU3 409 aaPredicted RBP19.35■□□□□ 0.69
PPP1CA-201ENST00000312989 KDM3BQ7LBC6 1761 aa19.35■□□□□ 0.69
PPP1CA-201ENST00000312989 GPR162Q16538 588 aa19.34■□□□□ 0.69
PPP1CA-201ENST00000312989 MAPK8IP3Q9UPT6 1336 aa19.34■□□□□ 0.69
PPP1CA-201ENST00000312989 DCAF8L1A6NGE4 600 aa19.33■□□□□ 0.69
PPP1CA-201ENST00000312989 IL6STP40189 918 aaPredicted RBP19.33■□□□□ 0.69
PPP1CA-201ENST00000312989 TMPOP42166 694 aaKnown RBP19.33■□□□□ 0.69
PPP1CA-201ENST00000312989 NFIXQ14938 502 aa19.33■□□□□ 0.69
PPP1CA-201ENST00000312989 ADAMTS8Q9UP79 889 aa19.33■□□□□ 0.69
PPP1CA-201ENST00000312989 SCN7AQ01118 1682 aa19.33■□□□□ 0.69
PPP1CA-201ENST00000312989 PNNQ9H307 717 aaKnown RBP19.32■□□□□ 0.68
PPP1CA-201ENST00000312989 NRXN2Q9P2S2 1712 aa19.32■□□□□ 0.68
PPP1CA-201ENST00000312989 NBPF26B4DH59 902 aa19.32■□□□□ 0.68
PPP1CA-201ENST00000312989 SNRPA1P09661 255 aaKnown RBP19.32■□□□□ 0.68
PPP1CA-201ENST00000312989 NBPF10Q6P3W6 841 aaKnown RBP19.32■□□□□ 0.68
PPP1CA-201ENST00000312989 CCDC146Q8IYE0 955 aa19.32■□□□□ 0.68
PPP1CA-201ENST00000312989 NBPF15Q8N660 670 aa19.32■□□□□ 0.68
PPP1CA-201ENST00000312989 ZNF316A6NFI3 1004 aaPredicted RBP19.31■□□□□ 0.68
PPP1CA-201ENST00000312989 KCNA3P22001 575 aa19.31■□□□□ 0.68
PPP1CA-201ENST00000312989 PIP4K2AP48426 406 aaPredicted RBP19.31■□□□□ 0.68
PPP1CA-201ENST00000312989 EIF4A1P60842 406 aaKnown RBP19.31■□□□□ 0.68
PPP1CA-201ENST00000312989 CCDC184Q52MB2 194 aa19.31■□□□□ 0.68
PPP1CA-201ENST00000312989 PARP3Q9Y6F1 533 aa19.31■□□□□ 0.68
PPP1CA-201ENST00000312989 ZPR1O75312 459 aa19.3■□□□□ 0.68
PPP1CA-201ENST00000312989 CAMTA2O94983 1202 aa19.3■□□□□ 0.68
PPP1CA-201ENST00000312989 NEFMP07197 916 aa19.3■□□□□ 0.68
PPP1CA-201ENST00000312989 RIPK4P57078 832 aa19.3■□□□□ 0.68
PPP1CA-201ENST00000312989 TGFB2P61812 414 aa19.3■□□□□ 0.68
PPP1CA-201ENST00000312989 PELP1Q8IZL8 1130 aaKnown RBP19.3■□□□□ 0.68
PPP1CA-201ENST00000312989 TRIM35Q9UPQ4 493 aa19.3■□□□□ 0.68
PPP1CA-201ENST00000312989 GIGYF1O75420 1035 aaPredicted RBP19.29■□□□□ 0.68
PPP1CA-201ENST00000312989 RUNDC1Q96C34 613 aa19.29■□□□□ 0.68
PPP1CA-201ENST00000312989 RRP7AQ9Y3A4 280 aaKnown RBP19.29■□□□□ 0.68
PPP1CA-201ENST00000312989 A0A0G2JLW4 131 aa19.28■□□□□ 0.68
PPP1CA-201ENST00000312989 DPEP1P16444 411 aa19.28■□□□□ 0.68
PPP1CA-201ENST00000312989 PNISRQ8TF01 805 aaKnown RBP19.28■□□□□ 0.68
PPP1CA-201ENST00000312989 WWC3Q9ULE0 1092 aa19.28■□□□□ 0.68
PPP1CA-201ENST00000312989 TBC1D2BQ9UPU7 963 aa19.28■□□□□ 0.68
PPP1CA-201ENST00000312989 CARMIL3Q8ND23 1372 aa19.28■□□□□ 0.68
PPP1CA-201ENST00000312989 LAMB4A4D0S4 1761 aa19.27■□□□□ 0.68
PPP1CA-201ENST00000312989 A0A087WZG4 1122 aa19.27■□□□□ 0.68
PPP1CA-201ENST00000312989 TBC1D9BQ66K14 1250 aa19.27■□□□□ 0.68
PPP1CA-201ENST00000312989 BCORQ6W2J9 1755 aa19.26■□□□□ 0.67
PPP1CA-201ENST00000312989 GRIN3BO60391 1043 aa19.26■□□□□ 0.67
PPP1CA-201ENST00000312989 WDR43Q15061 677 aaKnown RBP eCLIP19.25■□□□□ 0.67
PPP1CA-201ENST00000312989 N4BP2Q86UW6 1770 aaPredicted RBP19.25■□□□□ 0.67
PPP1CA-201ENST00000312989 BRCA1P38398 1863 aaKnown RBP19.24■□□□□ 0.67
PPP1CA-201ENST00000312989 SERPINB2P05120 415 aa19.24■□□□□ 0.67
PPP1CA-201ENST00000312989 LRP10Q7Z4F1 713 aa19.24■□□□□ 0.67
PPP1CA-201ENST00000312989 ZNF784Q8NCA9 323 aaPredicted RBP19.24■□□□□ 0.67
PPP1CA-201ENST00000312989 ADCY9O60503 1353 aa19.23■□□□□ 0.67
PPP1CA-201ENST00000312989 AFDNP55196 1824 aaKnown RBP19.23■□□□□ 0.67
PPP1CA-201ENST00000312989 DZIP3Q86Y13 1208 aaKnown RBP19.23■□□□□ 0.67
PPP1CA-201ENST00000312989 BABAM1Q9NWV8 329 aa19.23■□□□□ 0.67
PPP1CA-201ENST00000312989 ZNF330Q9Y3S2 320 aaPredicted RBP19.23■□□□□ 0.67
PPP1CA-201ENST00000312989 CHRNA5P30532 468 aa19.22■□□□□ 0.67
PPP1CA-201ENST00000312989 CHL1O00533 1208 aa19.21■□□□□ 0.67
PPP1CA-201ENST00000312989 LMOD3Q0VAK6 560 aa19.21■□□□□ 0.67
PPP1CA-201ENST00000312989 TSPYL4Q9UJ04 414 aa19.21■□□□□ 0.67
PPP1CA-201ENST00000312989 CHD4Q14839 1912 aa19.21■□□□□ 0.66
PPP1CA-201ENST00000312989 PDIA6Q15084 440 aa19.2■□□□□ 0.66
PPP1CA-201ENST00000312989 NEUROD2Q15784 382 aa19.2■□□□□ 0.66
PPP1CA-201ENST00000312989 BICDL1Q6ZP65 573 aa19.2■□□□□ 0.66
PPP1CA-201ENST00000312989 RGL2O15211 777 aa19.19■□□□□ 0.66
PPP1CA-201ENST00000312989 PRR5LQ6MZQ0 368 aa19.19■□□□□ 0.66
PPP1CA-201ENST00000312989 KRT24Q2M2I5 525 aa19.19■□□□□ 0.66
PPP1CA-201ENST00000312989 APAF1O14727 1248 aa19.18■□□□□ 0.66
PPP1CA-201ENST00000312989 HLFQ16534 295 aa19.18■□□□□ 0.66
PPP1CA-201ENST00000312989 CLEC4GQ6UXB4 293 aa19.18■□□□□ 0.66
PPP1CA-201ENST00000312989 BCS1LQ9Y276 419 aa19.18■□□□□ 0.66
PPP1CA-201ENST00000312989 ANKRD31Q8N7Z5 1873 aa19.17■□□□□ 0.66
PPP1CA-201ENST00000312989 ZNF853P0CG23 659 aa19.17■□□□□ 0.66
PPP1CA-201ENST00000312989 ERBB4Q15303 1308 aa19.17■□□□□ 0.66
PPP1CA-201ENST00000312989 PROSER3Q2NL68 480 aa19.16■□□□□ 0.66
PPP1CA-201ENST00000312989 TTLL7Q6ZT98 887 aa19.16■□□□□ 0.66
PPP1CA-201ENST00000312989 CCDC24Q8N4L8 307 aa19.16■□□□□ 0.66
PPP1CA-201ENST00000312989 PIM2Q9P1W9 311 aa19.16■□□□□ 0.66
PPP1CA-201ENST00000312989 DLEC1Q9Y238 1755 aa19.15■□□□□ 0.66
PPP1CA-201ENST00000312989 COL11A2P13942 1736 aaPredicted RBP19.14■□□□□ 0.65
PPP1CA-201ENST00000312989 ATP10DQ9P241 1426 aa19.13■□□□□ 0.65
PPP1CA-201ENST00000312989 MAP3K15Q6ZN16 1313 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms