RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 TRIM27P14373 513 aa6.19□□□□□ -1.42
CAST-201ENST00000309190 RARSP54136 660 aaKnown RBP6.19□□□□□ -1.42
CAST-201ENST00000309190 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.19□□□□□ -1.42
CAST-201ENST00000309190 PA2G4Q9UQ80 394 aaKnown RBP6.19□□□□□ -1.42
CAST-201ENST00000309190 FAM135BQ49AJ0 1406 aa6.19□□□□□ -1.42
CAST-201ENST00000309190 KRT27Q7Z3Y8 459 aa6.19□□□□□ -1.42
CAST-201ENST00000309190 SLC51AQ86UW1 340 aa6.19□□□□□ -1.42
CAST-201ENST00000309190 DZIP1LQ8IYY4 767 aaKnown RBP6.19□□□□□ -1.42
CAST-201ENST00000309190 MEIS3Q99687 375 aa6.19□□□□□ -1.42
CAST-201ENST00000309190 RGS17Q9UGC6 210 aaPredicted RBP6.19□□□□□ -1.42
CAST-201ENST00000309190 MAP3K2Q9Y2U5 619 aa6.19□□□□□ -1.42
CAST-201ENST00000309190 RGPD8O14715 1765 aaPredicted RBP6.19□□□□□ -1.42
CAST-201ENST00000309190 DIP2AQ14689 1571 aa6.19□□□□□ -1.42
CAST-201ENST00000309190 NEUROD6Q96NK8 337 aa6.19□□□□□ -1.42
CAST-201ENST00000309190 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.19□□□□□ -1.42
CAST-201ENST00000309190 ZKSCAN2Q63HK3 967 aa6.19□□□□□ -1.42
CAST-201ENST00000309190 FAM196AQ6ZSG2 479 aa6.19□□□□□ -1.42
CAST-201ENST00000309190 TRPC5Q9UL62 973 aaPredicted RBP6.19□□□□□ -1.42
CAST-201ENST00000309190 LMOD3Q0VAK6 560 aa6.18□□□□□ -1.42
CAST-201ENST00000309190 NOL8Q76FK4 1167 aaKnown RBP6.18□□□□□ -1.42
CAST-201ENST00000309190 IL27Q8NEV9 243 aa6.18□□□□□ -1.42
CAST-201ENST00000309190 FRAT2O75474 233 aaPredicted RBP6.18□□□□□ -1.42
CAST-201ENST00000309190 ZNF594Q96JF6 807 aaPredicted RBP6.18□□□□□ -1.42
CAST-201ENST00000309190 ARHGAP23Q9P227 1491 aa6.18□□□□□ -1.42
CAST-201ENST00000309190 ITSN1Q15811 1721 aa6.18□□□□□ -1.42
CAST-201ENST00000309190 VAMP4O75379 141 aa6.18□□□□□ -1.42
CAST-201ENST00000309190 FLIIQ13045 1269 aa6.18□□□□□ -1.42
CAST-201ENST00000309190 AKAP4Q5JQC9 854 aa6.18□□□□□ -1.42
CAST-201ENST00000309190 R3HDM1Q15032 1099 aaKnown RBP6.17□□□□□ -1.42
CAST-201ENST00000309190 EZH2Q15910 746 aaKnown RBP6.17□□□□□ -1.42
CAST-201ENST00000309190 C16orf71Q8IYS4 520 aaPredicted RBP6.17□□□□□ -1.42
CAST-201ENST00000309190 NINLQ9Y2I6 1382 aa6.17□□□□□ -1.42
CAST-201ENST00000309190 A0A087WZG4 1122 aa6.17□□□□□ -1.42
CAST-201ENST00000309190 AK7Q96M32 723 aa6.17□□□□□ -1.42
CAST-201ENST00000309190 ARHGEF10O15013 1369 aa6.17□□□□□ -1.42
CAST-201ENST00000309190 CPSF1Q10570 1443 aaKnown RBP6.17□□□□□ -1.42
CAST-201ENST00000309190 FMN2Q9NZ56 1722 aa6.17□□□□□ -1.42
CAST-201ENST00000309190 NBPF7P0C2Y1 421 aaPredicted RBP6.17□□□□□ -1.42
CAST-201ENST00000309190 SLC4A3P48751 1232 aa6.17□□□□□ -1.42
CAST-201ENST00000309190 FMNL2Q96PY5 1086 aa6.17□□□□□ -1.42
CAST-201ENST00000309190 CARD10Q9BWT7 1032 aa6.17□□□□□ -1.42
CAST-201ENST00000309190 SLC52A2Q9HAB3 445 aa6.17□□□□□ -1.42
CAST-201ENST00000309190 LOC102724428A0A0B4J2F2 783 aa6.16□□□□□ -1.42
CAST-201ENST00000309190 SIK1P57059 783 aa6.16□□□□□ -1.42
CAST-201ENST00000309190 FAM161AQ3B820 660 aa6.16□□□□□ -1.42
CAST-201ENST00000309190 AMOTQ4VCS5 1084 aa6.16□□□□□ -1.42
CAST-201ENST00000309190 GPR101Q96P66 508 aaPredicted RBP6.16□□□□□ -1.42
CAST-201ENST00000309190 SNRKQ9NRH2 765 aa6.16□□□□□ -1.42
CAST-201ENST00000309190 TRMT112Q9UI30 125 aaKnown RBP6.16□□□□□ -1.42
CAST-201ENST00000309190 LRRFIP2Q9Y608 721 aaKnown RBP6.16□□□□□ -1.42
CAST-201ENST00000309190 TNS3Q68CZ2 1445 aa6.16□□□□□ -1.42
CAST-201ENST00000309190 KDM4AO75164 1064 aa6.16□□□□□ -1.42
CAST-201ENST00000309190 SURF6O75683 361 aaKnown RBP6.16□□□□□ -1.42
CAST-201ENST00000309190 RFC4P35249 363 aa6.16□□□□□ -1.42
CAST-201ENST00000309190 HLFQ16534 295 aa6.16□□□□□ -1.42
CAST-201ENST00000309190 CCDC30Q5VVM6 783 aa6.16□□□□□ -1.42
CAST-201ENST00000309190 DCAF5Q96JK2 942 aa6.16□□□□□ -1.42
CAST-201ENST00000309190 NIP7Q9Y221 180 aaKnown RBP eCLIP6.16□□□□□ -1.42
CAST-201ENST00000309190 PIK3R4Q99570 1358 aa6.16□□□□□ -1.42
CAST-201ENST00000309190 IGSF1Q8N6C5 1336 aa6.16□□□□□ -1.42
CAST-201ENST00000309190 ZNF622Q969S3 477 aaKnown RBP eCLIP6.16□□□□□ -1.421e-7■■□□□ 14.1
CAST-201ENST00000309190 CHMP4AQ9BY43 222 aa6.16□□□□□ -1.42
CAST-201ENST00000309190 SCAF8Q9UPN6 1271 aaKnown RBP6.16□□□□□ -1.42
CAST-201ENST00000309190 PNPLA6Q8IY17 1366 aa6.16□□□□□ -1.42
CAST-201ENST00000309190 TRIM6-TRIM34B2RNG4 842 aa6.16□□□□□ -1.42
CAST-201ENST00000309190 NEXNQ0ZGT2 675 aa6.16□□□□□ -1.42
CAST-201ENST00000309190 RILPL2Q969X0 211 aa6.16□□□□□ -1.42
CAST-201ENST00000309190 XRN1Q8IZH2 1706 aaKnown RBP6.15□□□□□ -1.42
CAST-201ENST00000309190 SLIT1O75093 1534 aa6.15□□□□□ -1.42
CAST-201ENST00000309190 MAP2P11137 1827 aaKnown RBP6.15□□□□□ -1.42
CAST-201ENST00000309190 SRGAP3O43295 1099 aa6.15□□□□□ -1.42
CAST-201ENST00000309190 ZPR1O75312 459 aa6.15□□□□□ -1.42
CAST-201ENST00000309190 HSP90AB3PQ58FF7 597 aa6.15□□□□□ -1.42
CAST-201ENST00000309190 OLFM4Q6UX06 510 aa6.15□□□□□ -1.42
CAST-201ENST00000309190 AMIGO3Q86WK7 504 aa6.15□□□□□ -1.42
CAST-201ENST00000309190 ATG3Q9NT62 314 aa6.15□□□□□ -1.42
CAST-201ENST00000309190 PCDHB15Q9Y5E8 787 aa6.15□□□□□ -1.42
CAST-201ENST00000309190 JCADQ9P266 1359 aa6.15□□□□□ -1.42
CAST-201ENST00000309190 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.15□□□□□ -1.42
CAST-201ENST00000309190 WTIPA6NIX2 430 aaPredicted RBP6.15□□□□□ -1.42
CAST-201ENST00000309190 PPFIA3O75145 1194 aa6.15□□□□□ -1.42
CAST-201ENST00000309190 STARD3NLO95772 234 aa6.15□□□□□ -1.42
CAST-201ENST00000309190 IGHDP01880 384 aa6.15□□□□□ -1.42
CAST-201ENST00000309190 CALD1Q05682 793 aaKnown RBP6.15□□□□□ -1.42
CAST-201ENST00000309190 GORABQ5T7V8 394 aa6.15□□□□□ -1.42
CAST-201ENST00000309190 USPL1Q5W0Q7 1092 aa6.15□□□□□ -1.42
CAST-201ENST00000309190 SAMD1Q6SPF0 538 aaPredicted RBP6.15□□□□□ -1.42
CAST-201ENST00000309190 ATF7IPQ6VMQ6 1270 aa6.15□□□□□ -1.42
CAST-201ENST00000309190 ANKRD13DQ6ZTN6 518 aa6.15□□□□□ -1.42
CAST-201ENST00000309190 DZIP3Q86Y13 1208 aaKnown RBP6.15□□□□□ -1.42
CAST-201ENST00000309190 IPO8O15397 1037 aaKnown RBP6.15□□□□□ -1.43
CAST-201ENST00000309190 MYCNP04198 464 aaPredicted RBP6.15□□□□□ -1.43
CAST-201ENST00000309190 SNRPA1P09661 255 aaKnown RBP6.15□□□□□ -1.43
CAST-201ENST00000309190 UBTFL1P0CB47 393 aaPredicted RBP6.15□□□□□ -1.43
CAST-201ENST00000309190 EIF4A1P60842 406 aaKnown RBP6.15□□□□□ -1.43
CAST-201ENST00000309190 ZNF526Q8TF50 670 aaPredicted RBP6.15□□□□□ -1.43
CAST-201ENST00000309190 CCDC8Q9H0W5 538 aaPredicted RBP6.15□□□□□ -1.43
CAST-201ENST00000309190 FAM208AQ9UK61 1670 aaKnown RBP6.15□□□□□ -1.43
CAST-201ENST00000309190 MAP3K5Q99683 1374 aa6.15□□□□□ -1.43
CAST-201ENST00000309190 FSD2A1L4K1 749 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms