RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 POLR3EQ9NVU0 708 aa7.76□□□□□ -1.17
CKS1B-201ENST00000308987 DYRK1BQ9Y463 629 aa7.76□□□□□ -1.17
CKS1B-201ENST00000308987 GPSM3Q9Y4H4 160 aa7.76□□□□□ -1.17
CKS1B-201ENST00000308987 ZFYVE16Q7Z3T8 1539 aa7.76□□□□□ -1.17
CKS1B-201ENST00000308987 ARID4BQ4LE39 1312 aaPredicted RBP7.76□□□□□ -1.17
CKS1B-201ENST00000308987 NSFL1CQ9UNZ2 370 aaKnown RBP7.75□□□□□ -1.17
CKS1B-201ENST00000308987 SETD1BQ9UPS6 1966 aaKnown RBP7.75□□□□□ -1.17
CKS1B-201ENST00000308987 MYO5CQ9NQX4 1742 aa7.75□□□□□ -1.17
CKS1B-201ENST00000308987 KIF14Q15058 1648 aa7.74□□□□□ -1.17
CKS1B-201ENST00000308987 ESPNB1AK53 854 aa7.74□□□□□ -1.17
CKS1B-201ENST00000308987 COL8A1P27658 744 aa7.74□□□□□ -1.17
CKS1B-201ENST00000308987 POU4F2Q12837 409 aa7.74□□□□□ -1.17
CKS1B-201ENST00000308987 CYLDQ9NQC7 956 aa7.74□□□□□ -1.17
CKS1B-201ENST00000308987 ATP1B4Q9UN42 357 aaPredicted RBP7.74□□□□□ -1.17
CKS1B-201ENST00000308987 EFCAB5A4FU69 1503 aa7.73□□□□□ -1.17
CKS1B-201ENST00000308987 ARHGEF12Q9NZN5 1544 aa7.73□□□□□ -1.17
CKS1B-201ENST00000308987 CDC42BPBQ9Y5S2 1711 aa7.73□□□□□ -1.17
CKS1B-201ENST00000308987 PLEKHD1A6NEE1 506 aa7.73□□□□□ -1.17
CKS1B-201ENST00000308987 DZIP3Q86Y13 1208 aaKnown RBP7.73□□□□□ -1.17
CKS1B-201ENST00000308987 OXCT2Q9BYC2 517 aaPredicted RBP7.73□□□□□ -1.17
CKS1B-201ENST00000308987 MKL2Q9ULH7 1088 aa7.73□□□□□ -1.17
CKS1B-201ENST00000308987 PREX1Q8TCU6 1659 aa7.73□□□□□ -1.17
CKS1B-201ENST00000308987 POGZQ7Z3K3 1410 aa7.72□□□□□ -1.17
CKS1B-201ENST00000308987 SCAPERQ9BY12 1400 aa7.72□□□□□ -1.17
CKS1B-201ENST00000308987 SHISA8B8ZZ34 492 aa7.72□□□□□ -1.17
CKS1B-201ENST00000308987 MEN1O00255 615 aa7.72□□□□□ -1.17
CKS1B-201ENST00000308987 GPC1P35052 558 aa7.72□□□□□ -1.17
CKS1B-201ENST00000308987 ALYREFQ86V81 257 aaKnown RBP7.72□□□□□ -1.17
CKS1B-201ENST00000308987 MAGI2Q86UL8 1455 aa7.72□□□□□ -1.17
CKS1B-201ENST00000308987 PLCH2O75038 1416 aa7.71□□□□□ -1.17
CKS1B-201ENST00000308987 ATP5J2-PTCD1G3V325 749 aa7.71□□□□□ -1.18
CKS1B-201ENST00000308987 MLECQ14165 292 aa7.71□□□□□ -1.18
CKS1B-201ENST00000308987 PPP2R2DQ66LE6 453 aa7.71□□□□□ -1.18
CKS1B-201ENST00000308987 FAM9AQ8IZU1 332 aaPredicted RBP7.71□□□□□ -1.18
CKS1B-201ENST00000308987 RSPH6AQ9H0K4 717 aa7.71□□□□□ -1.18
CKS1B-201ENST00000308987 EEA1Q15075 1411 aa7.7□□□□□ -1.18
CKS1B-201ENST00000308987 A0A1W2PRU2 124 aa7.7□□□□□ -1.18
CKS1B-201ENST00000308987 MAP2K3P46734 347 aa7.7□□□□□ -1.18
CKS1B-201ENST00000308987 PDE4DQ08499 809 aa7.7□□□□□ -1.18
CKS1B-201ENST00000308987 C1orf229Q6ZS94 237 aaPredicted RBP7.7□□□□□ -1.18
CKS1B-201ENST00000308987 KDM5CP41229 1560 aa7.7□□□□□ -1.18
CKS1B-201ENST00000308987 ABCA6Q8N139 1617 aa7.7□□□□□ -1.18
CKS1B-201ENST00000308987 C3P01024 1663 aa7.7□□□□□ -1.18
CKS1B-201ENST00000308987 ATP10AO60312 1499 aa7.69□□□□□ -1.18
CKS1B-201ENST00000308987 ARHGAP35Q9NRY4 1499 aa7.69□□□□□ -1.18
CKS1B-201ENST00000308987 DIP2CQ9Y2E4 1556 aa7.69□□□□□ -1.18
CKS1B-201ENST00000308987 CEBPAP49715 358 aaPredicted RBP7.69□□□□□ -1.18
CKS1B-201ENST00000308987 FBXO31Q5XUX0 539 aaPredicted RBP7.69□□□□□ -1.18
CKS1B-201ENST00000308987 NUCKS1Q9H1E3 243 aaKnown RBP7.69□□□□□ -1.18
CKS1B-201ENST00000308987 RRAGCQ9HB90 399 aa7.69□□□□□ -1.18
CKS1B-201ENST00000308987 SLC27A3Q5K4L6 730 aa7.68□□□□□ -1.18
CKS1B-201ENST00000308987 NBPF10Q6P3W6 841 aaKnown RBP7.68□□□□□ -1.18
CKS1B-201ENST00000308987 SEPT12Q8IYM1 358 aa7.68□□□□□ -1.18
CKS1B-201ENST00000308987 NBPF15Q8N660 670 aa7.68□□□□□ -1.18
CKS1B-201ENST00000308987 EPS8L1Q8TE68 723 aa7.68□□□□□ -1.18
CKS1B-201ENST00000308987 KLRG1Q96E93 195 aa7.68□□□□□ -1.18
CKS1B-201ENST00000308987 GRIP2Q9C0E4 1043 aa7.68□□□□□ -1.18
CKS1B-201ENST00000308987 C9orf84Q5VXU9 1444 aa7.68□□□□□ -1.18
CKS1B-201ENST00000308987 CDC42BPAQ5VT25 1732 aa7.67□□□□□ -1.18
CKS1B-201ENST00000308987 KIDINS220Q9ULH0 1771 aa7.67□□□□□ -1.18
CKS1B-201ENST00000308987 GRIN2CQ14957 1233 aa7.67□□□□□ -1.18
CKS1B-201ENST00000308987 EDARADDQ8WWZ3 215 aa7.67□□□□□ -1.18
CKS1B-201ENST00000308987 CFHR5Q9BXR6 569 aa7.67□□□□□ -1.18
CKS1B-201ENST00000308987 SUV39H2Q9H5I1 410 aa7.67□□□□□ -1.18
CKS1B-201ENST00000308987 ITSN2Q9NZM3 1697 aa7.67□□□□□ -1.18
CKS1B-201ENST00000308987 C1QTNF9BB2RNN3 333 aa7.66□□□□□ -1.18
CKS1B-201ENST00000308987 F11P03951 625 aa7.66□□□□□ -1.18
CKS1B-201ENST00000308987 ITGB7P26010 798 aa7.66□□□□□ -1.18
CKS1B-201ENST00000308987 LINC00114Q6XXX2 140 aa7.66□□□□□ -1.18
CKS1B-201ENST00000308987 KRTAP1-3Q8IUG1 177 aa7.66□□□□□ -1.18
CKS1B-201ENST00000308987 AFAP1Q8N556 730 aa7.66□□□□□ -1.18
CKS1B-201ENST00000308987 TRIM52Q96A61 297 aa7.66□□□□□ -1.18
CKS1B-201ENST00000308987 NLRP3Q96P20 1036 aa7.66□□□□□ -1.18
CKS1B-201ENST00000308987 TIMMDC1Q9NPL8 285 aa7.66□□□□□ -1.18
CKS1B-201ENST00000308987 REREQ9P2R6 1566 aa7.66□□□□□ -1.18
CKS1B-201ENST00000308987 PREX2Q70Z35 1606 aa7.66□□□□□ -1.18
CKS1B-201ENST00000308987 THBS1P07996 1170 aa7.65□□□□□ -1.18
CKS1B-201ENST00000308987 HOXB4P17483 251 aaPredicted RBP7.65□□□□□ -1.18
CKS1B-201ENST00000308987 TROQ12816 1431 aaPredicted RBP7.65□□□□□ -1.18
CKS1B-201ENST00000308987 ARHGAP5Q13017 1502 aa7.65□□□□□ -1.18
CKS1B-201ENST00000308987 WDR44Q5JSH3 913 aa7.65□□□□□ -1.18
CKS1B-201ENST00000308987 EFCAB2Q5VUJ9 269 aa7.65□□□□□ -1.18
CKS1B-201ENST00000308987 ZNF518AQ6AHZ1 1483 aa7.65□□□□□ -1.18
CKS1B-201ENST00000308987 ILDR2Q71H61 639 aa7.65□□□□□ -1.18
CKS1B-201ENST00000308987 ABCC1P33527 1531 aa7.64□□□□□ -1.19
CKS1B-201ENST00000308987 TRAPPC8Q9Y2L5 1435 aa7.64□□□□□ -1.19
CKS1B-201ENST00000308987 SPATA31C2B4DYI2 1134 aa7.64□□□□□ -1.19
CKS1B-201ENST00000308987 CD163Q86VB7 1156 aa7.64□□□□□ -1.19
CKS1B-201ENST00000308987 GDF2Q9UK05 429 aaPredicted RBP7.64□□□□□ -1.19
CKS1B-201ENST00000308987 LTBP4Q8N2S1 1624 aa7.63□□□□□ -1.19
CKS1B-201ENST00000308987 FMN1Q68DA7 1419 aa7.63□□□□□ -1.19
CKS1B-201ENST00000308987 GIGYF1O75420 1035 aaPredicted RBP7.63□□□□□ -1.19
CKS1B-201ENST00000308987 AP1G2O75843 785 aa7.63□□□□□ -1.19
CKS1B-201ENST00000308987 PNMA1Q8ND90 353 aa7.63□□□□□ -1.19
CKS1B-201ENST00000308987 MLH3Q9UHC1 1453 aa7.62□□□□□ -1.19
CKS1B-201ENST00000308987 WASLO00401 505 aaPredicted RBP7.62□□□□□ -1.19
CKS1B-201ENST00000308987 CLN3Q13286 438 aa7.62□□□□□ -1.19
CKS1B-201ENST00000308987 TAS1R3Q7RTX0 852 aa7.62□□□□□ -1.19
CKS1B-201ENST00000308987 PROCA1Q8NCQ7 364 aaPredicted RBP7.62□□□□□ -1.19
CKS1B-201ENST00000308987 SEMA6BQ9H3T3 888 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms