RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 GCC1Q96CN9 775 aa12.69□□□□□ -0.38
APOBEC3F-201ENST00000308521 STK31Q9BXU1 1019 aa12.69□□□□□ -0.38
APOBEC3F-201ENST00000308521 API5Q9BZZ5 524 aaKnown RBP12.69□□□□□ -0.38
APOBEC3F-201ENST00000308521 BTG4Q9NY30 223 aa12.69□□□□□ -0.38
APOBEC3F-201ENST00000308521 NCAPD2Q15021 1401 aa12.69□□□□□ -0.38
APOBEC3F-201ENST00000308521 PHKG2P15735 406 aa12.69□□□□□ -0.38
APOBEC3F-201ENST00000308521 HDGFL1Q5TGJ6 251 aa12.69□□□□□ -0.38
APOBEC3F-201ENST00000308521 CLEC17AQ6ZS10 378 aa12.69□□□□□ -0.38
APOBEC3F-201ENST00000308521 KIF2CQ99661 725 aa12.69□□□□□ -0.38
APOBEC3F-201ENST00000308521 SPG7Q9UQ90 795 aa12.69□□□□□ -0.38
APOBEC3F-201ENST00000308521 ABCC4O15439 1325 aa12.69□□□□□ -0.38
APOBEC3F-201ENST00000308521 ADAMTS2O95450 1211 aa12.68□□□□□ -0.38
APOBEC3F-201ENST00000308521 PHAXQ9H814 394 aaKnown RBP12.68□□□□□ -0.38
APOBEC3F-201ENST00000308521 WDR17Q8IZU2 1322 aa12.68□□□□□ -0.38
APOBEC3F-201ENST00000308521 CCDC30Q5VVM6 783 aa12.68□□□□□ -0.38
APOBEC3F-201ENST00000308521 DDX54Q8TDD1 881 aaKnown RBP12.68□□□□□ -0.38
APOBEC3F-201ENST00000308521 CRYBG1Q9Y4K1 1723 aa12.68□□□□□ -0.38
APOBEC3F-201ENST00000308521 FKBP5Q13451 457 aaPredicted RBP12.67□□□□□ -0.38
APOBEC3F-201ENST00000308521 LNPKQ9C0E8 428 aa12.67□□□□□ -0.38
APOBEC3F-201ENST00000308521 IFNL2Q8IZJ0 200 aa12.67□□□□□ -0.38
APOBEC3F-201ENST00000308521 NUTM2BA6NNL0 878 aaPredicted RBP12.66□□□□□ -0.38
APOBEC3F-201ENST00000308521 NUTM2EB1AL46 878 aaPredicted RBP12.66□□□□□ -0.38
APOBEC3F-201ENST00000308521 FLIIQ13045 1269 aa12.66□□□□□ -0.38
APOBEC3F-201ENST00000308521 NUTM2AQ8IVF1 878 aaPredicted RBP12.66□□□□□ -0.38
APOBEC3F-201ENST00000308521 IBTKQ9P2D0 1353 aaPredicted RBP12.66□□□□□ -0.38
APOBEC3F-201ENST00000308521 K7ELQ4 463 aaPredicted RBP12.66□□□□□ -0.38
APOBEC3F-201ENST00000308521 UTP14CQ5TAP6 766 aaKnown RBP12.66□□□□□ -0.38
APOBEC3F-201ENST00000308521 GAS2L3Q86XJ1 694 aa12.66□□□□□ -0.38
APOBEC3F-201ENST00000308521 CHPF2Q9P2E5 772 aa12.66□□□□□ -0.38
APOBEC3F-201ENST00000308521 LTBP4Q8N2S1 1624 aa12.66□□□□□ -0.38
APOBEC3F-201ENST00000308521 ROBO1Q9Y6N7 1651 aa12.66□□□□□ -0.38
APOBEC3F-201ENST00000308521 LRRC37A3O60309 1634 aa12.66□□□□□ -0.38
APOBEC3F-201ENST00000308521 TRIM44Q96DX7 344 aaPredicted RBP12.65□□□□□ -0.38
APOBEC3F-201ENST00000308521 RGS12O14924 1447 aa12.65□□□□□ -0.38
APOBEC3F-201ENST00000308521 COL5A2P05997 1499 aaPredicted RBP12.65□□□□□ -0.38
APOBEC3F-201ENST00000308521 MEIS3Q99687 375 aa12.65□□□□□ -0.39
APOBEC3F-201ENST00000308521 SLC52A2Q9HAB3 445 aa12.65□□□□□ -0.39
APOBEC3F-201ENST00000308521 BABAM1Q9NWV8 329 aa12.65□□□□□ -0.39
APOBEC3F-201ENST00000308521 ERBB4Q15303 1308 aa12.65□□□□□ -0.39
APOBEC3F-201ENST00000308521 KDM6AO15550 1401 aaPredicted RBP12.64□□□□□ -0.39
APOBEC3F-201ENST00000308521 FAM208AQ9UK61 1670 aaKnown RBP12.64□□□□□ -0.39
APOBEC3F-201ENST00000308521 NHSL1Q5SYE7 1610 aa12.64□□□□□ -0.39
APOBEC3F-201ENST00000308521 SIRT2Q8IXJ6 389 aa12.64□□□□□ -0.39
APOBEC3F-201ENST00000308521 ZCRB1Q8TBF4 217 aaKnown RBP12.64□□□□□ -0.39
APOBEC3F-201ENST00000308521 PPP1R9BQ96SB3 815 aa12.64□□□□□ -0.39
APOBEC3F-201ENST00000308521 PTPRCP08575 1304 aa12.64□□□□□ -0.39
APOBEC3F-201ENST00000308521 DCAF8L1A6NGE4 600 aa12.64□□□□□ -0.39
APOBEC3F-201ENST00000308521 CCDC173Q0VFZ6 552 aa12.64□□□□□ -0.39
APOBEC3F-201ENST00000308521 PROSER3Q2NL68 480 aa12.64□□□□□ -0.39
APOBEC3F-201ENST00000308521 INTS3Q68E01 1043 aaKnown RBP12.64□□□□□ -0.39
APOBEC3F-201ENST00000308521 LMO7Q8WWI1 1683 aa12.63□□□□□ -0.39
APOBEC3F-201ENST00000308521 GOLGA6L22H0YM25 854 aa12.63□□□□□ -0.39
APOBEC3F-201ENST00000308521 GIGYF1O75420 1035 aaPredicted RBP12.63□□□□□ -0.39
APOBEC3F-201ENST00000308521 IL2RBP14784 551 aa12.63□□□□□ -0.39
APOBEC3F-201ENST00000308521 PIP4K2AP48426 406 aaPredicted RBP12.63□□□□□ -0.39
APOBEC3F-201ENST00000308521 ANKRD45Q5TZF3 282 aa12.63□□□□□ -0.39
APOBEC3F-201ENST00000308521 ZNF790Q6PG37 636 aa12.63□□□□□ -0.39
APOBEC3F-201ENST00000308521 TBC1D9Q6ZT07 1266 aa12.63□□□□□ -0.39
APOBEC3F-201ENST00000308521 CARD10Q9BWT7 1032 aa12.63□□□□□ -0.39
APOBEC3F-201ENST00000308521 UBAP1LF5GYI3 381 aa12.63□□□□□ -0.39
APOBEC3F-201ENST00000308521 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.63□□□□□ -0.39
APOBEC3F-201ENST00000308521 CABP4P57796 275 aa12.62□□□□□ -0.39
APOBEC3F-201ENST00000308521 TAF7LQ5H9L4 462 aa12.62□□□□□ -0.39
APOBEC3F-201ENST00000308521 DCAF5Q96JK2 942 aa12.62□□□□□ -0.39
APOBEC3F-201ENST00000308521 KAT6BQ8WYB5 2073 aa12.62□□□□□ -0.39
APOBEC3F-201ENST00000308521 CD2BP2O95400 341 aaKnown RBP12.62□□□□□ -0.39
APOBEC3F-201ENST00000308521 KLHL40Q2TBA0 621 aa12.62□□□□□ -0.39
APOBEC3F-201ENST00000308521 ZNF496Q96IT1 587 aaPredicted RBP12.62□□□□□ -0.39
APOBEC3F-201ENST00000308521 TOM1O60784 492 aa12.61□□□□□ -0.39
APOBEC3F-201ENST00000308521 CDC45O75419 566 aa12.61□□□□□ -0.39
APOBEC3F-201ENST00000308521 APBB1O00213 710 aa12.6□□□□□ -0.39
APOBEC3F-201ENST00000308521 AIMP1Q12904 312 aaKnown RBP12.6□□□□□ -0.39
APOBEC3F-201ENST00000308521 ABCA3Q99758 1704 aa12.6□□□□□ -0.39
APOBEC3F-201ENST00000308521 PI4KAP2A4QPH2 592 aa12.6□□□□□ -0.39
APOBEC3F-201ENST00000308521 MYL6BP14649 208 aa12.6□□□□□ -0.39
APOBEC3F-201ENST00000308521 PI4KAP1Q8N8J0 262 aa12.6□□□□□ -0.39
APOBEC3F-201ENST00000308521 USP16Q9Y5T5 823 aa12.6□□□□□ -0.39
APOBEC3F-201ENST00000308521 OVOS2A0A0G2JMS6 1433 aa12.59□□□□□ -0.39
APOBEC3F-201ENST00000308521 SSFA2P28290 1259 aa12.59□□□□□ -0.39
APOBEC3F-201ENST00000308521 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.59□□□□□ -0.39
APOBEC3F-201ENST00000308521 BAG4O95429 457 aaKnown RBP12.59□□□□□ -0.39
APOBEC3F-201ENST00000308521 RABEP1Q15276 862 aa12.59□□□□□ -0.39
APOBEC3F-201ENST00000308521 TTC5Q8N0Z6 440 aa12.59□□□□□ -0.39
APOBEC3F-201ENST00000308521 PTCD1O75127 700 aaKnown RBP12.58□□□□□ -0.4
APOBEC3F-201ENST00000308521 NASPP49321 788 aaPredicted RBP12.58□□□□□ -0.4
APOBEC3F-201ENST00000308521 ZNF445P59923 1031 aa12.58□□□□□ -0.4
APOBEC3F-201ENST00000308521 PCDH11XQ9BZA7 1347 aa12.58□□□□□ -0.4
APOBEC3F-201ENST00000308521 PCDH11YQ9BZA8 1340 aa12.58□□□□□ -0.4
APOBEC3F-201ENST00000308521 NUCB2P80303 420 aa12.58□□□□□ -0.4
APOBEC3F-201ENST00000308521 ANP32BQ92688 251 aaKnown RBP12.58□□□□□ -0.4
APOBEC3F-201ENST00000308521 CCT4P50991 539 aaKnown RBP12.57□□□□□ -0.4
APOBEC3F-201ENST00000308521 HS1BP3Q53T59 392 aa12.57□□□□□ -0.4
APOBEC3F-201ENST00000308521 ZSCAN30Q86W11 494 aa12.57□□□□□ -0.4
APOBEC3F-201ENST00000308521 DBF4Q9UBU7 674 aaPredicted RBP12.57□□□□□ -0.4
APOBEC3F-201ENST00000308521 KDM3BQ7LBC6 1761 aa12.57□□□□□ -0.4
APOBEC3F-201ENST00000308521 OFD1O75665 1012 aa12.57□□□□□ -0.4
APOBEC3F-201ENST00000308521 RBM42Q9BTD8 480 aaKnown RBP12.57□□□□□ -0.4
APOBEC3F-201ENST00000308521 HOXB7P09629 217 aa12.56□□□□□ -0.4
APOBEC3F-201ENST00000308521 CEP85Q6P2H3 762 aa12.56□□□□□ -0.4
APOBEC3F-201ENST00000308521 KIAA1211Q6ZU35 1233 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms