RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 SCLT1Q96NL6 688 aa12.67□□□□□ -0.38
SYNPO2-201ENST00000307142 TRAPPC3LQ5T215 181 aa12.66□□□□□ -0.38
SYNPO2-201ENST00000307142 FLIIQ13045 1269 aa12.66□□□□□ -0.38
SYNPO2-201ENST00000307142 CCDC70Q6NSX1 233 aa12.66□□□□□ -0.38
SYNPO2-201ENST00000307142 ANKRD13DQ6ZTN6 518 aa12.66□□□□□ -0.38
SYNPO2-201ENST00000307142 SMARCA5O60264 1052 aaPredicted RBP12.66□□□□□ -0.38
SYNPO2-201ENST00000307142 MAGEC2Q9UBF1 373 aaPredicted RBP12.66□□□□□ -0.38
SYNPO2-201ENST00000307142 NOL7Q9UMY1 257 aaKnown RBP12.66□□□□□ -0.38
SYNPO2-201ENST00000307142 ANXA1P04083 346 aa12.66□□□□□ -0.38
SYNPO2-201ENST00000307142 PDCP20941 246 aa12.66□□□□□ -0.38
SYNPO2-201ENST00000307142 RPAP2Q8IXW5 612 aaPredicted RBP12.66□□□□□ -0.38
SYNPO2-201ENST00000307142 SLFN5Q08AF3 891 aa12.66□□□□□ -0.38
SYNPO2-201ENST00000307142 RBM26Q5T8P6 1007 aaKnown RBP12.66□□□□□ -0.38
SYNPO2-201ENST00000307142 BLOC1S2Q6QNY1 142 aa12.66□□□□□ -0.38
SYNPO2-201ENST00000307142 FBXO3Q9UK99 471 aa12.66□□□□□ -0.38
SYNPO2-201ENST00000307142 PCDH11XQ9BZA7 1347 aa12.66□□□□□ -0.38
SYNPO2-201ENST00000307142 PCDH11YQ9BZA8 1340 aa12.66□□□□□ -0.38
SYNPO2-201ENST00000307142 BAG3O95817 575 aa12.66□□□□□ -0.38
SYNPO2-201ENST00000307142 SPTY2D1Q68D10 685 aaPredicted RBP12.66□□□□□ -0.38
SYNPO2-201ENST00000307142 SSBP05455 408 aaKnown RBP eCLIP12.65□□□□□ -0.38
SYNPO2-201ENST00000307142 STK38Q15208 465 aa12.65□□□□□ -0.38
SYNPO2-201ENST00000307142 ORAI2Q96SN7 254 aa12.65□□□□□ -0.38
SYNPO2-201ENST00000307142 UTP14AQ9BVJ6 771 aaKnown RBP12.65□□□□□ -0.38
SYNPO2-201ENST00000307142 FANCIQ9NVI1 1328 aa12.65□□□□□ -0.38
SYNPO2-201ENST00000307142 ALDH1L2Q3SY69 923 aa12.65□□□□□ -0.38
SYNPO2-201ENST00000307142 CHPF2Q9P2E5 772 aa12.65□□□□□ -0.38
SYNPO2-201ENST00000307142 TBX22Q9Y458 520 aa12.65□□□□□ -0.38
SYNPO2-201ENST00000307142 LMOD1P29536 600 aaPredicted RBP12.65□□□□□ -0.38
SYNPO2-201ENST00000307142 JAKMIP1Q96N16 626 aaKnown RBP12.65□□□□□ -0.38
SYNPO2-201ENST00000307142 ADGBQ8N7X0 1667 aa12.65□□□□□ -0.38
SYNPO2-201ENST00000307142 APBA3O96018 575 aa12.65□□□□□ -0.38
SYNPO2-201ENST00000307142 HLA-DOAP06340 250 aa12.65□□□□□ -0.38
SYNPO2-201ENST00000307142 SYCP1Q15431 976 aa12.65□□□□□ -0.38
SYNPO2-201ENST00000307142 JDP2Q8WYK2 163 aa12.65□□□□□ -0.38
SYNPO2-201ENST00000307142 NAT10Q9H0A0 1025 aaKnown RBP12.65□□□□□ -0.38
SYNPO2-201ENST00000307142 DISP1Q96F81 1524 aa12.65□□□□□ -0.39
SYNPO2-201ENST00000307142 PTPRCP08575 1304 aa12.64□□□□□ -0.39
SYNPO2-201ENST00000307142 PI4KAP2A4QPH2 592 aa12.64□□□□□ -0.39
SYNPO2-201ENST00000307142 PI4KAP1Q8N8J0 262 aa12.64□□□□□ -0.39
SYNPO2-201ENST00000307142 CCNL1Q9UK58 526 aaPredicted RBP12.64□□□□□ -0.39
SYNPO2-201ENST00000307142 CHMP5Q9NZZ3 219 aa12.64□□□□□ -0.39
SYNPO2-201ENST00000307142 DEKP35659 375 aaKnown RBP12.64□□□□□ -0.39
SYNPO2-201ENST00000307142 MCM2P49736 904 aa12.64□□□□□ -0.39
SYNPO2-201ENST00000307142 SSH1Q8WYL5 1049 aa12.64□□□□□ -0.39
SYNPO2-201ENST00000307142 CABP5Q9NP86 173 aa12.64□□□□□ -0.39
SYNPO2-201ENST00000307142 CUL5Q93034 780 aa12.64□□□□□ -0.39
SYNPO2-201ENST00000307142 TPTE2Q6XPS3 522 aa12.64□□□□□ -0.39
SYNPO2-201ENST00000307142 U3KPZ7 1027 aaPredicted RBP12.64□□□□□ -0.39
SYNPO2-201ENST00000307142 PIK3R4Q99570 1358 aa12.64□□□□□ -0.39
SYNPO2-201ENST00000307142 SPDYE4A6NLX3 237 aa12.63□□□□□ -0.39
SYNPO2-201ENST00000307142 LDHCP07864 332 aa12.63□□□□□ -0.39
SYNPO2-201ENST00000307142 PDILTQ8N807 584 aa12.63□□□□□ -0.39
SYNPO2-201ENST00000307142 XAGE3Q8WTP9 111 aa12.63□□□□□ -0.39
SYNPO2-201ENST00000307142 PDRG1Q9NUG6 133 aa12.63□□□□□ -0.39
SYNPO2-201ENST00000307142 KINO60870 393 aaKnown RBP12.63□□□□□ -0.39
SYNPO2-201ENST00000307142 ARID3AQ99856 593 aa12.63□□□□□ -0.39
SYNPO2-201ENST00000307142 YTHDC2Q9H6S0 1430 aaKnown RBP12.63□□□□□ -0.39
SYNPO2-201ENST00000307142 GLRX3O76003 335 aaKnown RBP12.63□□□□□ -0.39
SYNPO2-201ENST00000307142 NF2P35240 595 aa12.63□□□□□ -0.39
SYNPO2-201ENST00000307142 RIMBP2O15034 1052 aa12.62□□□□□ -0.39
SYNPO2-201ENST00000307142 GSTO1P78417 241 aa12.62□□□□□ -0.39
SYNPO2-201ENST00000307142 EIF4A2Q14240 407 aaKnown RBP12.62□□□□□ -0.39
SYNPO2-201ENST00000307142 KRT32Q14532 448 aa12.62□□□□□ -0.39
SYNPO2-201ENST00000307142 CCDC184Q52MB2 194 aa12.62□□□□□ -0.39
SYNPO2-201ENST00000307142 TMEM87AQ8NBN3 555 aa12.62□□□□□ -0.39
SYNPO2-201ENST00000307142 GJA3Q9Y6H8 435 aa12.62□□□□□ -0.39
SYNPO2-201ENST00000307142 CDCA7Q9BWT1 371 aaPredicted RBP12.62□□□□□ -0.39
SYNPO2-201ENST00000307142 MBIPQ9NS73 344 aa12.62□□□□□ -0.39
SYNPO2-201ENST00000307142 SETD1BQ9UPS6 1966 aaKnown RBP12.62□□□□□ -0.39
SYNPO2-201ENST00000307142 TTF1Q15361 905 aaPredicted RBP12.62□□□□□ -0.39
SYNPO2-201ENST00000307142 COPS6Q7L5N1 327 aa12.62□□□□□ -0.39
SYNPO2-201ENST00000307142 DNMT1P26358 1616 aaKnown RBP12.62□□□□□ -0.39
SYNPO2-201ENST00000307142 IQCA1Q86XH1 822 aa12.62□□□□□ -0.39
SYNPO2-201ENST00000307142 ZNF592Q92610 1267 aa12.62□□□□□ -0.39
SYNPO2-201ENST00000307142 C11orf95C9JLR9 678 aaPredicted RBP12.62□□□□□ -0.39
SYNPO2-201ENST00000307142 ECM2O94769 699 aaPredicted RBP12.62□□□□□ -0.39
SYNPO2-201ENST00000307142 BRPF1P55201 1214 aaPredicted RBP12.62□□□□□ -0.39
SYNPO2-201ENST00000307142 JMYQ8N9B5 988 aa12.62□□□□□ -0.39
SYNPO2-201ENST00000307142 VEZTQ9HBM0 779 aa12.62□□□□□ -0.39
SYNPO2-201ENST00000307142 ASXL1Q8IXJ9 1541 aa12.61□□□□□ -0.39
SYNPO2-201ENST00000307142 RABEP1Q15276 862 aa12.61□□□□□ -0.39
SYNPO2-201ENST00000307142 ZNF804AQ7Z570 1209 aa12.61□□□□□ -0.39
SYNPO2-201ENST00000307142 WASF1Q92558 559 aa12.61□□□□□ -0.39
SYNPO2-201ENST00000307142 ZNF213O14771 459 aa12.61□□□□□ -0.39
SYNPO2-201ENST00000307142 MX1P20591 662 aa12.61□□□□□ -0.39
SYNPO2-201ENST00000307142 BAG6P46379 1132 aa12.61□□□□□ -0.39
SYNPO2-201ENST00000307142 FLT4P35916 1363 aa12.61□□□□□ -0.39
SYNPO2-201ENST00000307142 NEO1Q92859 1461 aa12.61□□□□□ -0.39
SYNPO2-201ENST00000307142 ZCCHC11Q5TAX3 1644 aaKnown RBP12.61□□□□□ -0.39
SYNPO2-201ENST00000307142 NKTRP30414 1462 aaKnown RBP12.61□□□□□ -0.39
SYNPO2-201ENST00000307142 TARBP1Q13395 1621 aaKnown RBP12.61□□□□□ -0.39
SYNPO2-201ENST00000307142 CASTP20810 708 aaKnown RBP12.6□□□□□ -0.39
SYNPO2-201ENST00000307142 GOLIM4O00461 696 aa12.6□□□□□ -0.39
SYNPO2-201ENST00000307142 PPP4R3AQ6IN85 833 aa12.6□□□□□ -0.39
SYNPO2-201ENST00000307142 HOMER1Q86YM7 354 aa12.6□□□□□ -0.39
SYNPO2-201ENST00000307142 AEBP1Q8IUX7 1158 aa12.6□□□□□ -0.39
SYNPO2-201ENST00000307142 ZC3H12CQ9C0D7 883 aaKnown RBP12.6□□□□□ -0.39
SYNPO2-201ENST00000307142 PDCL3Q9H2J4 239 aa12.6□□□□□ -0.39
SYNPO2-201ENST00000307142 SNRKQ9NRH2 765 aa12.6□□□□□ -0.39
SYNPO2-201ENST00000307142 BMP2KQ9NSY1 1161 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms