RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 DDR1Q08345 913 aa18.49■□□□□ 0.55
TMEM41B-201ENST00000299596 FMNL2Q96PY5 1086 aa18.49■□□□□ 0.55
TMEM41B-201ENST00000299596 COL15A1P39059 1388 aa18.49■□□□□ 0.55
TMEM41B-201ENST00000299596 HEG1Q9ULI3 1381 aa18.49■□□□□ 0.55
TMEM41B-201ENST00000299596 HTATSF1O43719 755 aaKnown RBP18.49■□□□□ 0.55
TMEM41B-201ENST00000299596 DPEP1P16444 411 aa18.49■□□□□ 0.55
TMEM41B-201ENST00000299596 CANXP27824 592 aaKnown RBP18.49■□□□□ 0.55
TMEM41B-201ENST00000299596 VIRMAQ69YN4 1812 aaKnown RBP18.48■□□□□ 0.55
TMEM41B-201ENST00000299596 A0A087WZG4 1122 aa18.48■□□□□ 0.55
TMEM41B-201ENST00000299596 POLRMTO00411 1230 aaKnown RBP18.48■□□□□ 0.55
TMEM41B-201ENST00000299596 EIF5P55010 431 aaKnown RBP18.48■□□□□ 0.55
TMEM41B-201ENST00000299596 BCS1LQ9Y276 419 aa18.48■□□□□ 0.55
TMEM41B-201ENST00000299596 KIF13BQ9NQT8 1826 aa18.47■□□□□ 0.55
TMEM41B-201ENST00000299596 NEFMP07197 916 aa18.47■□□□□ 0.55
TMEM41B-201ENST00000299596 UBR2Q8IWV8 1755 aa18.46■□□□□ 0.55
TMEM41B-201ENST00000299596 GIGYF1O75420 1035 aaPredicted RBP18.46■□□□□ 0.55
TMEM41B-201ENST00000299596 KCNA3P22001 575 aa18.45■□□□□ 0.54
TMEM41B-201ENST00000299596 C1QTNF8P60827 252 aa18.45■□□□□ 0.54
TMEM41B-201ENST00000299596 NFIXQ14938 502 aa18.45■□□□□ 0.54
TMEM41B-201ENST00000299596 MCM10Q7L590 875 aa18.45■□□□□ 0.54
TMEM41B-201ENST00000299596 PIM2Q9P1W9 311 aa18.45■□□□□ 0.54
TMEM41B-201ENST00000299596 KCNQ3O43525 872 aa18.44■□□□□ 0.54
TMEM41B-201ENST00000299596 IL6STP40189 918 aaPredicted RBP18.44■□□□□ 0.54
TMEM41B-201ENST00000299596 NPM2Q86SE8 214 aaKnown RBP18.44■□□□□ 0.54
TMEM41B-201ENST00000299596 BCL2L12Q9HB09 334 aa18.44■□□□□ 0.54
TMEM41B-201ENST00000299596 ATP10DQ9P241 1426 aa18.44■□□□□ 0.54
TMEM41B-201ENST00000299596 PNNQ9H307 717 aaKnown RBP18.43■□□□□ 0.54
TMEM41B-201ENST00000299596 RALBP1Q15311 655 aa18.42■□□□□ 0.54
TMEM41B-201ENST00000299596 ARHGAP27Q6ZUM4 889 aa18.42■□□□□ 0.54
TMEM41B-201ENST00000299596 SIPA1L3O60292 1781 aaPredicted RBP18.42■□□□□ 0.54
TMEM41B-201ENST00000299596 ADCY9O60503 1353 aa18.42■□□□□ 0.54
TMEM41B-201ENST00000299596 KIAA1551Q9HCM1 1747 aa18.42■□□□□ 0.54
TMEM41B-201ENST00000299596 A1BGP04217 495 aa18.41■□□□□ 0.54
TMEM41B-201ENST00000299596 SERPINB2P05120 415 aa18.41■□□□□ 0.54
TMEM41B-201ENST00000299596 SNRPA1P09661 255 aaKnown RBP18.41■□□□□ 0.54
TMEM41B-201ENST00000299596 DCTN1Q14203 1278 aa18.41■□□□□ 0.54
TMEM41B-201ENST00000299596 TAF7Q15545 349 aaPredicted RBP18.41■□□□□ 0.54
TMEM41B-201ENST00000299596 DALRD3Q5D0E6 543 aaKnown RBP18.41■□□□□ 0.54
TMEM41B-201ENST00000299596 GPBP1L1Q9HC44 474 aaPredicted RBP18.41■□□□□ 0.54
TMEM41B-201ENST00000299596 N4BP2Q86UW6 1770 aaPredicted RBP18.41■□□□□ 0.54
TMEM41B-201ENST00000299596 ZNF330Q9Y3S2 320 aaPredicted RBP18.4■□□□□ 0.54
TMEM41B-201ENST00000299596 CHRNA5P30532 468 aa18.4■□□□□ 0.54
TMEM41B-201ENST00000299596 PLEKHF1Q96S99 279 aa18.4■□□□□ 0.54
TMEM41B-201ENST00000299596 TBC1D2BQ9UPU7 963 aa18.4■□□□□ 0.54
TMEM41B-201ENST00000299596 USP16Q9Y5T5 823 aa18.4■□□□□ 0.54
TMEM41B-201ENST00000299596 DDX10Q13206 875 aaKnown RBP18.38■□□□□ 0.53
TMEM41B-201ENST00000299596 BICDL1Q6ZP65 573 aa18.38■□□□□ 0.53
TMEM41B-201ENST00000299596 PNISRQ8TF01 805 aaKnown RBP18.38■□□□□ 0.53
TMEM41B-201ENST00000299596 NFE2L2Q16236 605 aa18.37■□□□□ 0.53
TMEM41B-201ENST00000299596 TBC1D9BQ66K14 1250 aa18.37■□□□□ 0.53
TMEM41B-201ENST00000299596 ZNF526Q8TF50 670 aaPredicted RBP18.37■□□□□ 0.53
TMEM41B-201ENST00000299596 MAPK8IP3Q9UPT6 1336 aa18.36■□□□□ 0.53
TMEM41B-201ENST00000299596 PRAMEF22A3QJZ6 481 aa18.35■□□□□ 0.53
TMEM41B-201ENST00000299596 CAMTA2O94983 1202 aa18.35■□□□□ 0.53
TMEM41B-201ENST00000299596 DZIP3Q86Y13 1208 aaKnown RBP18.35■□□□□ 0.53
TMEM41B-201ENST00000299596 H0YIN7 160 aa18.34■□□□□ 0.53
TMEM41B-201ENST00000299596 SETDB2Q96T68 719 aa18.34■□□□□ 0.53
TMEM41B-201ENST00000299596 MIS18AQ9NYP9 233 aa18.34■□□□□ 0.53
TMEM41B-201ENST00000299596 PDZRN3Q9UPQ7 1066 aa18.34■□□□□ 0.53
TMEM41B-201ENST00000299596 CARMIL3Q8ND23 1372 aa18.34■□□□□ 0.53
TMEM41B-201ENST00000299596 SENP3-EIF4A1A0A087X0R7 540 aa18.33■□□□□ 0.53
TMEM41B-201ENST00000299596 CLEC4GQ6UXB4 293 aa18.33■□□□□ 0.53
TMEM41B-201ENST00000299596 C2CD5Q86YS7 1000 aa18.33■□□□□ 0.53
TMEM41B-201ENST00000299596 BRCA1P38398 1863 aaKnown RBP18.33■□□□□ 0.52
TMEM41B-201ENST00000299596 NRXN2Q9P2S2 1712 aa18.33■□□□□ 0.52
TMEM41B-201ENST00000299596 PIP4K2AP48426 406 aaPredicted RBP18.32■□□□□ 0.52
TMEM41B-201ENST00000299596 TTLL6Q8N841 843 aa18.32■□□□□ 0.52
TMEM41B-201ENST00000299596 BRIP1Q9BX63 1249 aa18.32■□□□□ 0.52
TMEM41B-201ENST00000299596 PDE6BP35913 854 aa18.32■□□□□ 0.52
TMEM41B-201ENST00000299596 C9orf131Q5VYM1 1079 aa18.32■□□□□ 0.52
TMEM41B-201ENST00000299596 ZNF652Q9Y2D9 606 aa18.32■□□□□ 0.52
TMEM41B-201ENST00000299596 MYBBP1AQ9BQG0 1328 aaKnown RBP18.31■□□□□ 0.52
TMEM41B-201ENST00000299596 NBPF26B4DH59 902 aa18.31■□□□□ 0.52
TMEM41B-201ENST00000299596 RGL2O15211 777 aa18.31■□□□□ 0.52
TMEM41B-201ENST00000299596 PRR5LQ6MZQ0 368 aa18.31■□□□□ 0.52
TMEM41B-201ENST00000299596 NBPF10Q6P3W6 841 aaKnown RBP18.31■□□□□ 0.52
TMEM41B-201ENST00000299596 NBPF15Q8N660 670 aa18.31■□□□□ 0.52
TMEM41B-201ENST00000299596 AFDNP55196 1824 aaKnown RBP18.3■□□□□ 0.52
TMEM41B-201ENST00000299596 NPHP1O15259 732 aa18.3■□□□□ 0.52
TMEM41B-201ENST00000299596 CNBD1Q8NA66 436 aa18.3■□□□□ 0.52
TMEM41B-201ENST00000299596 ARFGEF1Q9Y6D6 1849 aa18.3■□□□□ 0.52
TMEM41B-201ENST00000299596 RIPK4P57078 832 aa18.29■□□□□ 0.52
TMEM41B-201ENST00000299596 EIF4A1P60842 406 aaKnown RBP18.29■□□□□ 0.52
TMEM41B-201ENST00000299596 THUMPD2Q9BTF0 503 aaKnown RBP18.29■□□□□ 0.52
TMEM41B-201ENST00000299596 SCN7AQ01118 1682 aa18.29■□□□□ 0.52
TMEM41B-201ENST00000299596 ST5P78524 1137 aa18.28■□□□□ 0.52
TMEM41B-201ENST00000299596 RNF181Q9P0P0 153 aa18.28■□□□□ 0.52
TMEM41B-201ENST00000299596 KIF3CO14782 793 aa18.27■□□□□ 0.52
TMEM41B-201ENST00000299596 ZNF622Q969S3 477 aaKnown RBP eCLIP18.27■□□□□ 0.528e-7■□□□□ 11.2
TMEM41B-201ENST00000299596 LMOD3Q0VAK6 560 aa18.26■□□□□ 0.51
TMEM41B-201ENST00000299596 NBPF5PQ86XG9 351 aaPredicted RBP18.26■□□□□ 0.51
TMEM41B-201ENST00000299596 CCDC24Q8N4L8 307 aa18.26■□□□□ 0.51
TMEM41B-201ENST00000299596 BABAM1Q9NWV8 329 aa18.26■□□□□ 0.51
TMEM41B-201ENST00000299596 TMPOP42166 694 aaKnown RBP18.25■□□□□ 0.51
TMEM41B-201ENST00000299596 LMNB1P20700 586 aa18.24■□□□□ 0.51
TMEM41B-201ENST00000299596 WDR43Q15061 677 aaKnown RBP eCLIP18.24■□□□□ 0.51
TMEM41B-201ENST00000299596 TPTE2Q6XPS3 522 aa18.24■□□□□ 0.51
TMEM41B-201ENST00000299596 TSPYL4Q9UJ04 414 aa18.24■□□□□ 0.51
TMEM41B-201ENST00000299596 NIP7Q9Y221 180 aaKnown RBP eCLIP18.24■□□□□ 0.51
TMEM41B-201ENST00000299596 DLG5Q8TDM6 1919 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms