RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 FOXD4L4Q8WXT5 416 aaPredicted RBP18.96■□□□□ 0.63
UBAP1-201ENST00000297661 FLT4P35916 1363 aa18.96■□□□□ 0.63
UBAP1-201ENST00000297661 NUTM2BA6NNL0 878 aaPredicted RBP18.95■□□□□ 0.62
UBAP1-201ENST00000297661 NUTM2EB1AL46 878 aaPredicted RBP18.95■□□□□ 0.62
UBAP1-201ENST00000297661 PDE1AP54750 535 aa18.95■□□□□ 0.62
UBAP1-201ENST00000297661 CASC1Q6TDU7 716 aa18.95■□□□□ 0.62
UBAP1-201ENST00000297661 NUTM2AQ8IVF1 878 aaPredicted RBP18.95■□□□□ 0.62
UBAP1-201ENST00000297661 CCDC94Q9BW85 323 aaPredicted RBP18.95■□□□□ 0.62
UBAP1-201ENST00000297661 STK31Q9BXU1 1019 aa18.95■□□□□ 0.62
UBAP1-201ENST00000297661 ARHGEF10O15013 1369 aa18.95■□□□□ 0.62
UBAP1-201ENST00000297661 FBXO41Q8TF61 875 aa18.95■□□□□ 0.62
UBAP1-201ENST00000297661 ZBTB7CA1YPR0 619 aa18.94■□□□□ 0.62
UBAP1-201ENST00000297661 HMMRO75330 724 aa18.94■□□□□ 0.62
UBAP1-201ENST00000297661 FLIIQ13045 1269 aa18.94■□□□□ 0.62
UBAP1-201ENST00000297661 SSH2Q76I76 1423 aa18.94■□□□□ 0.62
UBAP1-201ENST00000297661 NOL8Q76FK4 1167 aaKnown RBP18.94■□□□□ 0.62
UBAP1-201ENST00000297661 SBNO1A3KN83 1393 aa18.94■□□□□ 0.62
UBAP1-201ENST00000297661 RGPD1P0DJD0 1748 aa18.94■□□□□ 0.62
UBAP1-201ENST00000297661 GNAI2P04899 355 aa18.94■□□□□ 0.62
UBAP1-201ENST00000297661 NUCB2P80303 420 aa18.94■□□□□ 0.62
UBAP1-201ENST00000297661 DMTNQ08495 405 aa18.94■□□□□ 0.62
UBAP1-201ENST00000297661 RBM27Q9P2N5 1060 aaKnown RBP18.94■□□□□ 0.62
UBAP1-201ENST00000297661 CCDC39Q9UFE4 941 aa18.94■□□□□ 0.62
UBAP1-201ENST00000297661 CCT4P50991 539 aaKnown RBP18.93■□□□□ 0.62
UBAP1-201ENST00000297661 ILDR1Q86SU0 546 aaPredicted RBP18.93■□□□□ 0.62
UBAP1-201ENST00000297661 UTP14CQ5TAP6 766 aaKnown RBP18.93■□□□□ 0.62
UBAP1-201ENST00000297661 PHLPP1O60346 1717 aa18.92■□□□□ 0.62
UBAP1-201ENST00000297661 SOS2Q07890 1332 aaPredicted RBP18.92■□□□□ 0.62
UBAP1-201ENST00000297661 IGSF1Q8N6C5 1336 aa18.92■□□□□ 0.62
UBAP1-201ENST00000297661 IL17REQ8NFR9 667 aa18.92■□□□□ 0.62
UBAP1-201ENST00000297661 RILPL2Q969X0 211 aa18.92■□□□□ 0.62
UBAP1-201ENST00000297661 PXDNQ92626 1479 aa18.92■□□□□ 0.62
UBAP1-201ENST00000297661 ERC2O15083 957 aa18.91■□□□□ 0.62
UBAP1-201ENST00000297661 CYP2E1P05181 493 aaPredicted RBP18.91■□□□□ 0.62
UBAP1-201ENST00000297661 ZSCAN20P17040 1043 aaPredicted RBP18.91■□□□□ 0.62
UBAP1-201ENST00000297661 LRRFIP2Q9Y608 721 aaKnown RBP18.91■□□□□ 0.62
UBAP1-201ENST00000297661 PRPF40AO75400 957 aaKnown RBP18.91■□□□□ 0.62
UBAP1-201ENST00000297661 GPT2Q8TD30 523 aa18.91■□□□□ 0.62
UBAP1-201ENST00000297661 TTC21AQ8NDW8 1320 aa18.91■□□□□ 0.62
UBAP1-201ENST00000297661 GNAT3A8MTJ3 354 aa18.9■□□□□ 0.62
UBAP1-201ENST00000297661 TRIM6-TRIM34B2RNG4 842 aa18.9■□□□□ 0.62
UBAP1-201ENST00000297661 REC8O95072 547 aa18.9■□□□□ 0.62
UBAP1-201ENST00000297661 HOXC9P31274 260 aa18.9■□□□□ 0.62
UBAP1-201ENST00000297661 IL1RAPL2Q9NP60 686 aa18.9■□□□□ 0.62
UBAP1-201ENST00000297661 KDRP35968 1356 aa18.89■□□□□ 0.62
UBAP1-201ENST00000297661 ST18O60284 1047 aa18.89■□□□□ 0.62
UBAP1-201ENST00000297661 PHAXQ9H814 394 aaKnown RBP18.89■□□□□ 0.62
UBAP1-201ENST00000297661 SPATA31A3Q5VYP0 1347 aa18.89■□□□□ 0.61
UBAP1-201ENST00000297661 LRSAM1Q6UWE0 723 aa18.89■□□□□ 0.61
UBAP1-201ENST00000297661 LRRC59Q96AG4 307 aaKnown RBP18.89■□□□□ 0.61
UBAP1-201ENST00000297661 ADAMTS2O95450 1211 aa18.88■□□□□ 0.61
UBAP1-201ENST00000297661 NEK4P51957 841 aa18.88■□□□□ 0.61
UBAP1-201ENST00000297661 CCDC30Q5VVM6 783 aa18.88■□□□□ 0.61
UBAP1-201ENST00000297661 UNC5CLQ8IV45 518 aa18.88■□□□□ 0.61
UBAP1-201ENST00000297661 LRRCC1Q9C099 1032 aa18.88■□□□□ 0.61
UBAP1-201ENST00000297661 PALD1Q9ULE6 856 aa18.88■□□□□ 0.61
UBAP1-201ENST00000297661 KIF1AQ12756 1690 aa18.88■□□□□ 0.61
UBAP1-201ENST00000297661 SYCE3A1L190 88 aa18.88■□□□□ 0.61
UBAP1-201ENST00000297661 MAP4K4O95819 1239 aaPredicted RBP18.88■□□□□ 0.61
UBAP1-201ENST00000297661 EIF2S2P20042 333 aaKnown RBP18.88■□□□□ 0.61
UBAP1-201ENST00000297661 MX1P20591 662 aa18.87■□□□□ 0.61
UBAP1-201ENST00000297661 ZC3H6P61129 1189 aaKnown RBP18.87■□□□□ 0.61
UBAP1-201ENST00000297661 TMEM63CQ9P1W3 806 aa18.87■□□□□ 0.61
UBAP1-201ENST00000297661 NHSL1Q5SYE7 1610 aa18.87■□□□□ 0.61
UBAP1-201ENST00000297661 ANO2Q9NQ90 1003 aa18.87■□□□□ 0.61
UBAP1-201ENST00000297661 NUTM1Q86Y26 1132 aa18.86■□□□□ 0.61
UBAP1-201ENST00000297661 MYRIPQ8NFW9 859 aa18.86■□□□□ 0.61
UBAP1-201ENST00000297661 JARID2Q92833 1246 aaPredicted RBP18.86■□□□□ 0.61
UBAP1-201ENST00000297661 ZDHHC9Q9Y397 364 aa18.86■□□□□ 0.61
UBAP1-201ENST00000297661 FGD1P98174 961 aa18.86■□□□□ 0.61
UBAP1-201ENST00000297661 KIAA2012Q0VF49 1180 aa18.86■□□□□ 0.61
UBAP1-201ENST00000297661 RNF214Q8ND24 703 aa18.86■□□□□ 0.61
UBAP1-201ENST00000297661 ANXA1P04083 346 aa18.85■□□□□ 0.61
UBAP1-201ENST00000297661 COL16A1Q07092 1604 aaPredicted RBP18.85■□□□□ 0.61
UBAP1-201ENST00000297661 PTMAP06454 111 aaKnown RBP18.85■□□□□ 0.61
UBAP1-201ENST00000297661 DNTTIP2Q5QJE6 756 aaKnown RBP18.85■□□□□ 0.61
UBAP1-201ENST00000297661 USP44Q9H0E7 712 aa18.85■□□□□ 0.61
UBAP1-201ENST00000297661 IL25Q9H293 177 aa18.85■□□□□ 0.61
UBAP1-201ENST00000297661 OSBPL3Q9H4L5 887 aa18.85■□□□□ 0.61
UBAP1-201ENST00000297661 PIK3C2AO00443 1686 aa18.84■□□□□ 0.61
UBAP1-201ENST00000297661 TNS3Q68CZ2 1445 aa18.84■□□□□ 0.61
UBAP1-201ENST00000297661 ATP8B2P98198 1209 aa18.84■□□□□ 0.61
UBAP1-201ENST00000297661 FOXD4L6Q3SYB3 417 aaPredicted RBP18.84■□□□□ 0.61
UBAP1-201ENST00000297661 HDGFL1Q5TGJ6 251 aa18.84■□□□□ 0.61
UBAP1-201ENST00000297661 FOXD4L3Q6VB84 417 aaPredicted RBP18.84■□□□□ 0.61
UBAP1-201ENST00000297661 TSC1Q92574 1164 aa18.84■□□□□ 0.61
UBAP1-201ENST00000297661 ESYT1Q9BSJ8 1104 aa18.84■□□□□ 0.61
UBAP1-201ENST00000297661 GNAI3P08754 354 aa18.84■□□□□ 0.61
UBAP1-201ENST00000297661 AHDC1Q5TGY3 1603 aaPredicted RBP18.83■□□□□ 0.61
UBAP1-201ENST00000297661 UPF3BQ9BZI7 483 aaKnown RBP18.83■□□□□ 0.61
UBAP1-201ENST00000297661 NSFL1CQ9UNZ2 370 aaKnown RBP18.83■□□□□ 0.61
UBAP1-201ENST00000297661 TRPM3Q9HCF6 1732 aaPredicted RBP18.83■□□□□ 0.61
UBAP1-201ENST00000297661 SALL3Q9BXA9 1300 aa18.83■□□□□ 0.6
UBAP1-201ENST00000297661 TAF7Q15545 349 aaPredicted RBP18.83■□□□□ 0.6
UBAP1-201ENST00000297661 CHRNA2Q15822 529 aa18.83■□□□□ 0.6
UBAP1-201ENST00000297661 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.83■□□□□ 0.6
UBAP1-201ENST00000297661 ZNF710Q8N1W2 664 aa18.82■□□□□ 0.6
UBAP1-201ENST00000297661 TMX3Q96JJ7 454 aa18.82■□□□□ 0.6
UBAP1-201ENST00000297661 LGR6Q9HBX8 967 aa18.82■□□□□ 0.6
UBAP1-201ENST00000297661 MAP3K5Q99683 1374 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms