RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 USP16Q9Y5T5 823 aa16.97■□□□□ 0.31
CHMP4C-201ENST00000297265 LRRFIP2Q9Y608 721 aaKnown RBP16.97■□□□□ 0.31
CHMP4C-201ENST00000297265 EVA1CP58658 441 aa16.96■□□□□ 0.31
CHMP4C-201ENST00000297265 HYPKQ9NX55 129 aa16.96■□□□□ 0.31
CHMP4C-201ENST00000297265 BTG4Q9NY30 223 aa16.96■□□□□ 0.31
CHMP4C-201ENST00000297265 NBPF7P0C2Y1 421 aaPredicted RBP16.95■□□□□ 0.3
CHMP4C-201ENST00000297265 CABP4P57796 275 aa16.95■□□□□ 0.3
CHMP4C-201ENST00000297265 COL16A1Q07092 1604 aaPredicted RBP16.95■□□□□ 0.3
CHMP4C-201ENST00000297265 KSR2Q6VAB6 950 aa16.95■□□□□ 0.3
CHMP4C-201ENST00000297265 OTUD7AQ8TE49 926 aaPredicted RBP16.95■□□□□ 0.3
CHMP4C-201ENST00000297265 SMARCA5O60264 1052 aaPredicted RBP16.94■□□□□ 0.3
CHMP4C-201ENST00000297265 HMMRO75330 724 aa16.94■□□□□ 0.3
CHMP4C-201ENST00000297265 MAP3K2Q9Y2U5 619 aa16.94■□□□□ 0.3
CHMP4C-201ENST00000297265 ERVV-2B6SEH9 535 aa16.93■□□□□ 0.3
CHMP4C-201ENST00000297265 UBTFL1P0CB47 393 aaPredicted RBP16.93■□□□□ 0.3
CHMP4C-201ENST00000297265 GSPT1P15170 499 aaKnown RBP16.93■□□□□ 0.3
CHMP4C-201ENST00000297265 COL14A1Q05707 1796 aaKnown RBP16.93■□□□□ 0.3
CHMP4C-201ENST00000297265 SNRPA1P09661 255 aaKnown RBP16.93■□□□□ 0.3
CHMP4C-201ENST00000297265 TBC1D32Q96NH3 1257 aa16.93■□□□□ 0.3
CHMP4C-201ENST00000297265 ANP32EQ9BTT0 268 aa16.93■□□□□ 0.3
CHMP4C-201ENST00000297265 UBR2Q8IWV8 1755 aa16.92■□□□□ 0.3
CHMP4C-201ENST00000297265 FMNL2Q96PY5 1086 aa16.92■□□□□ 0.3
CHMP4C-201ENST00000297265 TTC5Q8N0Z6 440 aa16.91■□□□□ 0.3
CHMP4C-201ENST00000297265 DDX54Q8TDD1 881 aaKnown RBP16.91■□□□□ 0.3
CHMP4C-201ENST00000297265 SSH3Q8TE77 659 aa16.91■□□□□ 0.3
CHMP4C-201ENST00000297265 DDRGK1Q96HY6 314 aa16.91■□□□□ 0.3
CHMP4C-201ENST00000297265 USP35Q9P2H5 1018 aa16.91■□□□□ 0.3
CHMP4C-201ENST00000297265 EXOC6BQ9Y2D4 811 aa16.91■□□□□ 0.3
CHMP4C-201ENST00000297265 PAPPAQ13219 1627 aa16.91■□□□□ 0.3
CHMP4C-201ENST00000297265 TOGARAM1Q9Y4F4 1720 aa16.91■□□□□ 0.3
CHMP4C-201ENST00000297265 POLA2Q14181 598 aa16.9■□□□□ 0.3
CHMP4C-201ENST00000297265 DISP2A7MBM2 1401 aa16.9■□□□□ 0.3
CHMP4C-201ENST00000297265 APBB1O00213 710 aa16.9■□□□□ 0.3
CHMP4C-201ENST00000297265 ALDH1L1O75891 902 aa16.9■□□□□ 0.3
CHMP4C-201ENST00000297265 CWF19L2Q2TBE0 894 aaKnown RBP16.9■□□□□ 0.3
CHMP4C-201ENST00000297265 KCPQ6ZWJ8 1503 aa16.9■□□□□ 0.3
CHMP4C-201ENST00000297265 SALL3Q9BXA9 1300 aa16.9■□□□□ 0.3
CHMP4C-201ENST00000297265 IBTKQ9P2D0 1353 aaPredicted RBP16.89■□□□□ 0.29
CHMP4C-201ENST00000297265 MYL6BP14649 208 aa16.89■□□□□ 0.29
CHMP4C-201ENST00000297265 AIMP1Q12904 312 aaKnown RBP16.89■□□□□ 0.29
CHMP4C-201ENST00000297265 PPP1R42Q7Z4L9 355 aa16.89■□□□□ 0.29
CHMP4C-201ENST00000297265 IGKV5-2P06315 115 aa16.88■□□□□ 0.29
CHMP4C-201ENST00000297265 PIP4K2AP48426 406 aaPredicted RBP16.88■□□□□ 0.29
CHMP4C-201ENST00000297265 TTC22Q5TAA0 569 aa16.88■□□□□ 0.29
CHMP4C-201ENST00000297265 COPS6Q7L5N1 327 aa16.88■□□□□ 0.29
CHMP4C-201ENST00000297265 LAMB4A4D0S4 1761 aa16.88■□□□□ 0.29
CHMP4C-201ENST00000297265 SLC4A3P48751 1232 aa16.88■□□□□ 0.29
CHMP4C-201ENST00000297265 LINS1Q8NG48 757 aa16.88■□□□□ 0.29
CHMP4C-201ENST00000297265 XAGE3Q8WTP9 111 aa16.88■□□□□ 0.29
CHMP4C-201ENST00000297265 UTYO14607 1347 aa16.88■□□□□ 0.29
CHMP4C-201ENST00000297265 TNS2Q63HR2 1409 aa16.87■□□□□ 0.29
CHMP4C-201ENST00000297265 OSBPL3Q9H4L5 887 aa16.87■□□□□ 0.29
CHMP4C-201ENST00000297265 PHLPP1O60346 1717 aa16.87■□□□□ 0.29
CHMP4C-201ENST00000297265 MTX1Q13505 466 aa16.86■□□□□ 0.29
CHMP4C-201ENST00000297265 KAZALD1Q96I82 304 aa16.86■□□□□ 0.29
CHMP4C-201ENST00000297265 NBPF26B4DH59 902 aa16.86■□□□□ 0.29
CHMP4C-201ENST00000297265 DDX58O95786 925 aaKnown RBP16.86■□□□□ 0.29
CHMP4C-201ENST00000297265 MFAP1P55081 439 aaKnown RBP16.86■□□□□ 0.29
CHMP4C-201ENST00000297265 NBPF14Q5TI25 921 aa16.86■□□□□ 0.29
CHMP4C-201ENST00000297265 NBPF10Q6P3W6 841 aaKnown RBP16.86■□□□□ 0.29
CHMP4C-201ENST00000297265 TBC1D9Q6ZT07 1266 aa16.86■□□□□ 0.29
CHMP4C-201ENST00000297265 NBPF15Q8N660 670 aa16.86■□□□□ 0.29
CHMP4C-201ENST00000297265 LRRCC1Q9C099 1032 aa16.85■□□□□ 0.29
CHMP4C-201ENST00000297265 PDE1AP54750 535 aa16.84■□□□□ 0.29
CHMP4C-201ENST00000297265 ANKRD13DQ6ZTN6 518 aa16.84■□□□□ 0.29
CHMP4C-201ENST00000297265 ERICH6Q7L0X2 663 aa16.84■□□□□ 0.29
CHMP4C-201ENST00000297265 METTL22Q9BUU2 404 aaPredicted RBP16.84■□□□□ 0.29
CHMP4C-201ENST00000297265 C22orf23Q9BZE7 217 aa16.84■□□□□ 0.29
CHMP4C-201ENST00000297265 BCL11AQ9H165 835 aa16.84■□□□□ 0.29
CHMP4C-201ENST00000297265 UPF2Q9HAU5 1272 aaKnown RBP16.84■□□□□ 0.29
CHMP4C-201ENST00000297265 PLCH1Q4KWH8 1693 aa16.84■□□□□ 0.29
CHMP4C-201ENST00000297265 SRGAP3O43295 1099 aa16.84■□□□□ 0.29
CHMP4C-201ENST00000297265 RIC3Q7Z5B4 369 aa16.84■□□□□ 0.29
CHMP4C-201ENST00000297265 TUBGCP6Q96RT7 1819 aa16.83■□□□□ 0.29
CHMP4C-201ENST00000297265 NEURL1BA8MQ27 555 aa16.83■□□□□ 0.28
CHMP4C-201ENST00000297265 GRM8O00222 908 aa16.83■□□□□ 0.28
CHMP4C-201ENST00000297265 SDSP20132 328 aa16.83■□□□□ 0.28
CHMP4C-201ENST00000297265 C9orf78Q9NZ63 289 aaPredicted RBP16.83■□□□□ 0.28
CHMP4C-201ENST00000297265 ITGB4P16144 1822 aa16.83■□□□□ 0.28
CHMP4C-201ENST00000297265 PIGBQ92521 554 aa16.82■□□□□ 0.28
CHMP4C-201ENST00000297265 NRAPQ86VF7 1730 aa16.82■□□□□ 0.28
CHMP4C-201ENST00000297265 PTCD1O75127 700 aaKnown RBP16.82■□□□□ 0.28
CHMP4C-201ENST00000297265 RBM25P49756 843 aaKnown RBP16.82■□□□□ 0.28
CHMP4C-201ENST00000297265 SUCLG2Q96I99 432 aa16.82■□□□□ 0.28
CHMP4C-201ENST00000297265 WNK3Q9BYP7 1800 aa16.81■□□□□ 0.28
CHMP4C-201ENST00000297265 ARFGEF2Q9Y6D5 1785 aa16.81■□□□□ 0.28
CHMP4C-201ENST00000297265 ERBB4Q15303 1308 aa16.81■□□□□ 0.28
CHMP4C-201ENST00000297265 SURF6O75683 361 aaKnown RBP16.81■□□□□ 0.28
CHMP4C-201ENST00000297265 GCKRQ14397 625 aa16.81■□□□□ 0.28
CHMP4C-201ENST00000297265 RAB11FIP3O75154 756 aa16.8■□□□□ 0.28
CHMP4C-201ENST00000297265 CDC45O75419 566 aa16.8■□□□□ 0.28
CHMP4C-201ENST00000297265 ADAMTS2O95450 1211 aa16.8■□□□□ 0.28
CHMP4C-201ENST00000297265 A1BGP04217 495 aa16.8■□□□□ 0.28
CHMP4C-201ENST00000297265 MYD88Q99836 296 aa16.8■□□□□ 0.28
CHMP4C-201ENST00000297265 STAP2Q9UGK3 403 aa16.8■□□□□ 0.28
CHMP4C-201ENST00000297265 ASAP1Q9ULH1 1129 aa16.8■□□□□ 0.28
CHMP4C-201ENST00000297265 TSHZ3Q63HK5 1081 aa16.8■□□□□ 0.28
CHMP4C-201ENST00000297265 TMOD3Q9NYL9 352 aa16.8■□□□□ 0.28
CHMP4C-201ENST00000297265 TOM1O60784 492 aa16.79■□□□□ 0.28
CHMP4C-201ENST00000297265 PIP4K2BP78356 416 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 166.6 ms