RNA–Protein interactions for RNA: ENST00000295454.7

GABRB1-201, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB1, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-201ENST00000295454 MAP3K2Q9Y2U5 619 aa22.54■■□□□ 1.2
GABRB1-201ENST00000295454 ZCRB1Q8TBF4 217 aaKnown RBP22.53■■□□□ 1.2
GABRB1-201ENST00000295454 CARD10Q9BWT7 1032 aa22.53■■□□□ 1.2
GABRB1-201ENST00000295454 CHMP4AQ9BY43 222 aa22.53■■□□□ 1.2
GABRB1-201ENST00000295454 TOGARAM1Q9Y4F4 1720 aa22.53■■□□□ 1.2
GABRB1-201ENST00000295454 LAMB4A4D0S4 1761 aa22.52■■□□□ 1.2
GABRB1-201ENST00000295454 LTBP4Q8N2S1 1624 aa22.52■■□□□ 1.2
GABRB1-201ENST00000295454 PIP4K2AP48426 406 aaPredicted RBP22.52■■□□□ 1.2
GABRB1-201ENST00000295454 CABP4P57796 275 aa22.52■■□□□ 1.2
GABRB1-201ENST00000295454 AIMP1Q12904 312 aaKnown RBP22.52■■□□□ 1.2
GABRB1-201ENST00000295454 TTC22Q5TAA0 569 aa22.52■■□□□ 1.2
GABRB1-201ENST00000295454 DDX21Q9NR30 783 aaKnown RBP eCLIP22.52■■□□□ 1.2
GABRB1-201ENST00000295454 PCDH11XQ9BZA7 1347 aa22.52■■□□□ 1.2
GABRB1-201ENST00000295454 PCDH11YQ9BZA8 1340 aa22.52■■□□□ 1.2
GABRB1-201ENST00000295454 COL16A1Q07092 1604 aaPredicted RBP22.51■■□□□ 1.19
GABRB1-201ENST00000295454 UBR2Q8IWV8 1755 aa22.51■■□□□ 1.19
GABRB1-201ENST00000295454 HSP90AB1P08238 724 aaKnown RBP22.51■■□□□ 1.19
GABRB1-201ENST00000295454 IL2RBP14784 551 aa22.51■■□□□ 1.19
GABRB1-201ENST00000295454 KSR2Q6VAB6 950 aa22.51■■□□□ 1.19
GABRB1-201ENST00000295454 TBC1D9Q6ZT07 1266 aa22.51■■□□□ 1.19
GABRB1-201ENST00000295454 C22orf23Q9BZE7 217 aa22.51■■□□□ 1.19
GABRB1-201ENST00000295454 HYPKQ9NX55 129 aa22.51■■□□□ 1.19
GABRB1-201ENST00000295454 USP16Q9Y5T5 823 aa22.51■■□□□ 1.19
GABRB1-201ENST00000295454 PAPPAQ13219 1627 aa22.5■■□□□ 1.19
GABRB1-201ENST00000295454 AHDC1Q5TGY3 1603 aaPredicted RBP22.5■■□□□ 1.19
GABRB1-201ENST00000295454 TUBGCP6Q96RT7 1819 aa22.5■■□□□ 1.19
GABRB1-201ENST00000295454 MYL6BP14649 208 aa22.5■■□□□ 1.19
GABRB1-201ENST00000295454 EVA1CP58658 441 aa22.5■■□□□ 1.19
GABRB1-201ENST00000295454 USP35Q9P2H5 1018 aa22.5■■□□□ 1.19
GABRB1-201ENST00000295454 CWF19L2Q2TBE0 894 aaKnown RBP22.49■■□□□ 1.19
GABRB1-201ENST00000295454 TTC5Q8N0Z6 440 aa22.49■■□□□ 1.19
GABRB1-201ENST00000295454 NBR1Q14596 966 aa22.49■■□□□ 1.19
GABRB1-201ENST00000295454 IBTKQ9P2D0 1353 aaPredicted RBP22.48■■□□□ 1.19
GABRB1-201ENST00000295454 PPP1R42Q7Z4L9 355 aa22.48■■□□□ 1.19
GABRB1-201ENST00000295454 COL22A1Q8NFW1 1626 aaPredicted RBP22.48■■□□□ 1.19
GABRB1-201ENST00000295454 DDX54Q8TDD1 881 aaKnown RBP22.48■■□□□ 1.19
GABRB1-201ENST00000295454 BTG4Q9NY30 223 aa22.48■■□□□ 1.19
GABRB1-201ENST00000295454 COL14A1Q05707 1796 aaKnown RBP22.48■■□□□ 1.19
GABRB1-201ENST00000295454 SSH3Q8TE77 659 aa22.47■■□□□ 1.19
GABRB1-201ENST00000295454 FMNL2Q96PY5 1086 aa22.46■■□□□ 1.19
GABRB1-201ENST00000295454 SNRPA1P09661 255 aaKnown RBP22.46■■□□□ 1.19
GABRB1-201ENST00000295454 TSHZ3Q63HK5 1081 aa22.46■■□□□ 1.19
GABRB1-201ENST00000295454 LRP10Q7Z4F1 713 aa22.46■■□□□ 1.19
GABRB1-201ENST00000295454 XAGE3Q8WTP9 111 aa22.46■■□□□ 1.19
GABRB1-201ENST00000295454 DAXXQ9UER7 740 aaPredicted RBP22.46■■□□□ 1.19
GABRB1-201ENST00000295454 KCPQ6ZWJ8 1503 aa22.45■■□□□ 1.18
GABRB1-201ENST00000295454 POLA2Q14181 598 aa22.45■■□□□ 1.18
GABRB1-201ENST00000295454 SALL3Q9BXA9 1300 aa22.45■■□□□ 1.18
GABRB1-201ENST00000295454 CDC45O75419 566 aa22.45■■□□□ 1.18
GABRB1-201ENST00000295454 ARFGEF2Q9Y6D5 1785 aa22.45■■□□□ 1.18
GABRB1-201ENST00000295454 LRRCC1Q9C099 1032 aa22.44■■□□□ 1.18
GABRB1-201ENST00000295454 AFDNP55196 1824 aaKnown RBP22.43■■□□□ 1.18
GABRB1-201ENST00000295454 ALDH1L1O75891 902 aa22.43■■□□□ 1.18
GABRB1-201ENST00000295454 NKX1-1Q15270 411 aaPredicted RBP22.43■■□□□ 1.18
GABRB1-201ENST00000295454 COPS6Q7L5N1 327 aa22.43■■□□□ 1.18
GABRB1-201ENST00000295454 SRGAP3O43295 1099 aa22.43■■□□□ 1.18
GABRB1-201ENST00000295454 SDSP20132 328 aa22.43■■□□□ 1.18
GABRB1-201ENST00000295454 IGKV5-2P06315 115 aa22.42■■□□□ 1.18
GABRB1-201ENST00000295454 PDE1AP54750 535 aa22.42■■□□□ 1.18
GABRB1-201ENST00000295454 PHLPP1O60346 1717 aa22.41■■□□□ 1.18
GABRB1-201ENST00000295454 DDX58O95786 925 aaKnown RBP22.41■■□□□ 1.18
GABRB1-201ENST00000295454 RIC3Q7Z5B4 369 aa22.41■■□□□ 1.18
GABRB1-201ENST00000295454 C9orf78Q9NZ63 289 aaPredicted RBP22.41■■□□□ 1.18
GABRB1-201ENST00000295454 PLCH1Q4KWH8 1693 aa22.41■■□□□ 1.18
GABRB1-201ENST00000295454 WNK3Q9BYP7 1800 aa22.41■■□□□ 1.18
GABRB1-201ENST00000295454 ERVV-2B6SEH9 535 aa22.4■■□□□ 1.18
GABRB1-201ENST00000295454 LINS1Q8NG48 757 aa22.4■■□□□ 1.18
GABRB1-201ENST00000295454 TBC1D2Q9BYX2 928 aa22.4■■□□□ 1.18
GABRB1-201ENST00000295454 IL1RAPL2Q9NP60 686 aa22.4■■□□□ 1.18
GABRB1-201ENST00000295454 SURF6O75683 361 aaKnown RBP22.4■■□□□ 1.18
GABRB1-201ENST00000295454 ITGB4P16144 1822 aa22.4■■□□□ 1.18
GABRB1-201ENST00000295454 RBM25P49756 843 aaKnown RBP22.39■■□□□ 1.18
GABRB1-201ENST00000295454 SUCLG2Q96I99 432 aa22.39■■□□□ 1.18
GABRB1-201ENST00000295454 OSBPL3Q9H4L5 887 aa22.39■■□□□ 1.18
GABRB1-201ENST00000295454 KAZALD1Q96I82 304 aa22.39■■□□□ 1.17
GABRB1-201ENST00000295454 DISP2A7MBM2 1401 aa22.38■■□□□ 1.17
GABRB1-201ENST00000295454 MYD88Q99836 296 aa22.38■■□□□ 1.17
GABRB1-201ENST00000295454 TNS2Q63HR2 1409 aa22.38■■□□□ 1.17
GABRB1-201ENST00000295454 NBPF26B4DH59 902 aa22.37■■□□□ 1.17
GABRB1-201ENST00000295454 GRM8O00222 908 aa22.37■■□□□ 1.17
GABRB1-201ENST00000295454 NBPF14Q5TI25 921 aa22.37■■□□□ 1.17
GABRB1-201ENST00000295454 NBPF10Q6P3W6 841 aaKnown RBP22.37■■□□□ 1.17
GABRB1-201ENST00000295454 NBPF15Q8N660 670 aa22.37■■□□□ 1.17
GABRB1-201ENST00000295454 MX1P20591 662 aa22.37■■□□□ 1.17
GABRB1-201ENST00000295454 BECN1Q14457 450 aa22.37■■□□□ 1.17
GABRB1-201ENST00000295454 NUP188Q5SRE5 1749 aa22.36■■□□□ 1.17
GABRB1-201ENST00000295454 NEURL1BA8MQ27 555 aa22.36■■□□□ 1.17
GABRB1-201ENST00000295454 PTCD1O75127 700 aaKnown RBP22.36■■□□□ 1.17
GABRB1-201ENST00000295454 UTYO14607 1347 aa22.36■■□□□ 1.17
GABRB1-201ENST00000295454 MTX1Q13505 466 aa22.36■■□□□ 1.17
GABRB1-201ENST00000295454 NUTM1Q86Y26 1132 aa22.36■■□□□ 1.17
GABRB1-201ENST00000295454 KIF2CQ99661 725 aa22.36■■□□□ 1.17
GABRB1-201ENST00000295454 METTL22Q9BUU2 404 aaPredicted RBP22.36■■□□□ 1.17
GABRB1-201ENST00000295454 RHPN1Q8TCX5 695 aa22.35■■□□□ 1.17
GABRB1-201ENST00000295454 ANKRD13DQ6ZTN6 518 aa22.34■■□□□ 1.17
GABRB1-201ENST00000295454 JARID2Q92833 1246 aaPredicted RBP22.34■■□□□ 1.17
GABRB1-201ENST00000295454 PA2G4Q9UQ80 394 aaKnown RBP22.34■■□□□ 1.17
GABRB1-201ENST00000295454 NRAPQ86VF7 1730 aa22.34■■□□□ 1.17
GABRB1-201ENST00000295454 BICC1Q9H694 974 aaKnown RBP22.34■■□□□ 1.17
GABRB1-201ENST00000295454 RAB11FIP3O75154 756 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms