RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 DBF4Q9UBU7 674 aaPredicted RBP17.21■□□□□ 0.35
SEC16A-202ENST00000290037 PPP1R2P41236 205 aa17.21■□□□□ 0.35
SEC16A-202ENST00000290037 DNAAF4Q8WXU2 420 aa17.21■□□□□ 0.35
SEC16A-202ENST00000290037 DNAJC2Q99543 621 aaKnown RBP17.21■□□□□ 0.35
SEC16A-202ENST00000290037 LIMCH1Q9UPQ0 1083 aa17.21■□□□□ 0.35
SEC16A-202ENST00000290037 PRPF40AO75400 957 aaKnown RBP17.21■□□□□ 0.35
SEC16A-202ENST00000290037 KIF24Q5T7B8 1368 aa17.21■□□□□ 0.35
SEC16A-202ENST00000290037 PDILTQ8N807 584 aa17.21■□□□□ 0.35
SEC16A-202ENST00000290037 SNX21Q969T3 373 aa17.21■□□□□ 0.35
SEC16A-202ENST00000290037 HMOX1P09601 288 aa17.21■□□□□ 0.34
SEC16A-202ENST00000290037 RMND1Q9NWS8 449 aa17.21■□□□□ 0.34
SEC16A-202ENST00000290037 KIF5CO60282 957 aa17.2■□□□□ 0.34
SEC16A-202ENST00000290037 CASTP20810 708 aaKnown RBP17.2■□□□□ 0.34
SEC16A-202ENST00000290037 PRPHP41219 470 aa17.2■□□□□ 0.34
SEC16A-202ENST00000290037 SEPT7Q16181 437 aaKnown RBP17.2■□□□□ 0.34
SEC16A-202ENST00000290037 CLASP1Q7Z460 1538 aa17.2■□□□□ 0.34
SEC16A-202ENST00000290037 DYNC1I1O14576 645 aa17.2■□□□□ 0.34
SEC16A-202ENST00000290037 USP37Q86T82 979 aa17.2■□□□□ 0.34
SEC16A-202ENST00000290037 SEC63Q9UGP8 760 aaKnown RBP17.2■□□□□ 0.34
SEC16A-202ENST00000290037 SPAG1Q07617 926 aa17.2■□□□□ 0.34
SEC16A-202ENST00000290037 TMEM266Q2M3C6 531 aa17.2■□□□□ 0.34
SEC16A-202ENST00000290037 BTBD11A6QL63 1104 aa17.2■□□□□ 0.34
SEC16A-202ENST00000290037 STX1AQ16623 288 aa17.2■□□□□ 0.34
SEC16A-202ENST00000290037 TAF4BQ92750 862 aa17.2■□□□□ 0.34
SEC16A-202ENST00000290037 TUBB2AQ13885 445 aa17.19■□□□□ 0.34
SEC16A-202ENST00000290037 SPTY2D1Q68D10 685 aaPredicted RBP17.19■□□□□ 0.34
SEC16A-202ENST00000290037 TUBB2BQ9BVA1 445 aa17.19■□□□□ 0.34
SEC16A-202ENST00000290037 CALCOCO1Q9P1Z2 691 aa17.19■□□□□ 0.34
SEC16A-202ENST00000290037 AOX1Q06278 1338 aa17.19■□□□□ 0.34
SEC16A-202ENST00000290037 SRGAP3O43295 1099 aa17.19■□□□□ 0.34
SEC16A-202ENST00000290037 USO1O60763 962 aaKnown RBP17.19■□□□□ 0.34
SEC16A-202ENST00000290037 RARSP54136 660 aaKnown RBP17.19■□□□□ 0.34
SEC16A-202ENST00000290037 ARHGAP29Q52LW3 1261 aa17.19■□□□□ 0.34
SEC16A-202ENST00000290037 EIF4G3O43432 1585 aaKnown RBP17.18■□□□□ 0.34
SEC16A-202ENST00000290037 PRM3Q9NNZ6 103 aa17.18■□□□□ 0.34
SEC16A-202ENST00000290037 UBE2HP62256 183 aa17.18■□□□□ 0.34
SEC16A-202ENST00000290037 ZGPATQ8N5A5 531 aaKnown RBP17.18■□□□□ 0.34
SEC16A-202ENST00000290037 UBXN4Q92575 508 aa17.18■□□□□ 0.34
SEC16A-202ENST00000290037 SULT6B1Q6IMI4 303 aa17.18■□□□□ 0.34
SEC16A-202ENST00000290037 CEP128Q6ZU80 1094 aa17.18■□□□□ 0.34
SEC16A-202ENST00000290037 BBXQ8WY36 941 aaPredicted RBP17.18■□□□□ 0.34
SEC16A-202ENST00000290037 RAD50Q92878 1312 aa17.18■□□□□ 0.34
SEC16A-202ENST00000290037 SPA17Q15506 151 aa17.18■□□□□ 0.34
SEC16A-202ENST00000290037 LUZP1Q86V48 1076 aa17.18■□□□□ 0.34
SEC16A-202ENST00000290037 SENP3-EIF4A1A0A087X0R7 540 aa17.18■□□□□ 0.34
SEC16A-202ENST00000290037 GCOM1H8Y6P7 765 aaPredicted RBP17.17■□□□□ 0.34
SEC16A-202ENST00000290037 MYZAPP0CAP1 466 aa17.17■□□□□ 0.34
SEC16A-202ENST00000290037 KLHL40Q2TBA0 621 aa17.17■□□□□ 0.34
SEC16A-202ENST00000290037 AFAP1Q8N556 730 aa17.17■□□□□ 0.34
SEC16A-202ENST00000290037 ALS2CR12Q96Q35 445 aa17.17■□□□□ 0.34
SEC16A-202ENST00000290037 A2MP01023 1474 aa17.17■□□□□ 0.34
SEC16A-202ENST00000290037 MAPKBP1O60336 1514 aa17.17■□□□□ 0.34
SEC16A-202ENST00000290037 MAP3K12Q12852 859 aa17.17■□□□□ 0.34
SEC16A-202ENST00000290037 STK24Q9Y6E0 443 aa17.17■□□□□ 0.34
SEC16A-202ENST00000290037 DMRT2Q9Y5R5 561 aa17.17■□□□□ 0.34
SEC16A-202ENST00000290037 AACSQ86V21 672 aa17.16■□□□□ 0.34
SEC16A-202ENST00000290037 FOXD4L5Q5VV16 416 aaPredicted RBP17.16■□□□□ 0.34
SEC16A-202ENST00000290037 FOXD4L4Q8WXT5 416 aaPredicted RBP17.16■□□□□ 0.34
SEC16A-202ENST00000290037 TTC41PQ6P2S7 1318 aa17.16■□□□□ 0.34
SEC16A-202ENST00000290037 FIBPO43427 364 aa17.16■□□□□ 0.34
SEC16A-202ENST00000290037 CNNM2Q9H8M5 875 aa17.16■□□□□ 0.34
SEC16A-202ENST00000290037 ABCC2Q92887 1545 aa17.16■□□□□ 0.34
SEC16A-202ENST00000290037 MEX3CQ5U5Q3 659 aaKnown RBP17.16■□□□□ 0.34
SEC16A-202ENST00000290037 CRACR2AQ9BSW2 395 aa17.16■□□□□ 0.34
SEC16A-202ENST00000290037 IFIT1P09914 478 aaKnown RBP17.16■□□□□ 0.34
SEC16A-202ENST00000290037 TMCO3Q6UWJ1 677 aa17.16■□□□□ 0.34
SEC16A-202ENST00000290037 IQCA1Q86XH1 822 aa17.16■□□□□ 0.34
SEC16A-202ENST00000290037 ANKRD24Q8TF21 1146 aa17.16■□□□□ 0.34
SEC16A-202ENST00000290037 C14orf93Q9H972 538 aaKnown RBP17.16■□□□□ 0.34
SEC16A-202ENST00000290037 SHTN1A0MZ66 631 aa17.16■□□□□ 0.34
SEC16A-202ENST00000290037 MPHOSPH6Q99547 160 aaKnown RBP17.16■□□□□ 0.34
SEC16A-202ENST00000290037 TTC12Q9H892 705 aaPredicted RBP17.16■□□□□ 0.34
SEC16A-202ENST00000290037 IQCDQ96DY2 449 aa17.15■□□□□ 0.34
SEC16A-202ENST00000290037 RTL1A6NKG5 1358 aa17.15■□□□□ 0.34
SEC16A-202ENST00000290037 CLUL1Q15846 466 aa17.15■□□□□ 0.34
SEC16A-202ENST00000290037 AXDND1Q5T1B0 1012 aaPredicted RBP17.15■□□□□ 0.34
SEC16A-202ENST00000290037 INTS4Q96HW7 963 aaKnown RBP17.15■□□□□ 0.34
SEC16A-202ENST00000290037 FERMT1Q9BQL6 677 aa17.15■□□□□ 0.34
SEC16A-202ENST00000290037 CABP1Q9NZU7 370 aa17.15■□□□□ 0.34
SEC16A-202ENST00000290037 POLR1AO95602 1720 aaPredicted RBP17.15■□□□□ 0.34
SEC16A-202ENST00000290037 CAVIN4Q5BKX8 364 aa17.15■□□□□ 0.34
SEC16A-202ENST00000290037 STMN4Q9H169 189 aaPredicted RBP17.15■□□□□ 0.34
SEC16A-202ENST00000290037 PODXL2Q9NZ53 605 aa17.14■□□□□ 0.34
SEC16A-202ENST00000290037 PTPN14Q15678 1187 aa17.14■□□□□ 0.33
SEC16A-202ENST00000290037 CKAP4Q07065 602 aaKnown RBP17.14■□□□□ 0.33
SEC16A-202ENST00000290037 COL17A1Q9UMD9 1497 aaPredicted RBP17.14■□□□□ 0.33
SEC16A-202ENST00000290037 AIDAQ96BJ3 306 aa17.14■□□□□ 0.33
SEC16A-202ENST00000290037 TMOD2Q9NZR1 351 aa17.14■□□□□ 0.33
SEC16A-202ENST00000290037 PDCL3Q9H2J4 239 aa17.14■□□□□ 0.33
SEC16A-202ENST00000290037 SYNMO15061 1565 aa17.13■□□□□ 0.33
SEC16A-202ENST00000290037 SYCP2Q9BX26 1530 aa17.13■□□□□ 0.33
SEC16A-202ENST00000290037 PPP4R3AQ6IN85 833 aa17.13■□□□□ 0.33
SEC16A-202ENST00000290037 GNAQP50148 359 aa17.13■□□□□ 0.33
SEC16A-202ENST00000290037 NUTM2DQ5VT03 806 aaPredicted RBP17.13■□□□□ 0.33
SEC16A-202ENST00000290037 KCNG4Q8TDN1 519 aa17.13■□□□□ 0.33
SEC16A-202ENST00000290037 NUDT16Q96DE0 195 aaKnown RBP17.13■□□□□ 0.33
SEC16A-202ENST00000290037 GSTO1P78417 241 aa17.13■□□□□ 0.33
SEC16A-202ENST00000290037 NDC80O14777 642 aa17.12■□□□□ 0.33
SEC16A-202ENST00000290037 PROSER2Q86WR7 435 aaPredicted RBP17.12■□□□□ 0.33
SEC16A-202ENST00000290037 CTCFLQ8NI51 663 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms