RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 STRCQ7RTU9 1775 aa23.81■■□□□ 1.4
BRAF-201ENST00000288602 IL1RAPL2Q9NP60 686 aa23.81■■□□□ 1.4
BRAF-201ENST00000288602 CYP27B1O15528 508 aa23.81■■□□□ 1.4
BRAF-201ENST00000288602 IFNL2Q8IZJ0 200 aa23.8■■□□□ 1.4
BRAF-201ENST00000288602 CHMP4AQ9BY43 222 aa23.8■■□□□ 1.4
BRAF-201ENST00000288602 SLAIN2Q9P270 581 aa23.8■■□□□ 1.4
BRAF-201ENST00000288602 CD2BP2O95400 341 aaKnown RBP23.79■■□□□ 1.4
BRAF-201ENST00000288602 SRGAP3O43295 1099 aa23.79■■□□□ 1.4
BRAF-201ENST00000288602 CWF19L2Q2TBE0 894 aaKnown RBP23.79■■□□□ 1.4
BRAF-201ENST00000288602 SSH3Q8TE77 659 aa23.79■■□□□ 1.4
BRAF-201ENST00000288602 SURF6O75683 361 aaKnown RBP23.78■■□□□ 1.4
BRAF-201ENST00000288602 ADAMTS7Q9UKP4 1686 aa23.77■■□□□ 1.4
BRAF-201ENST00000288602 SALL3Q9BXA9 1300 aa23.77■■□□□ 1.4
BRAF-201ENST00000288602 MYL6BP14649 208 aa23.77■■□□□ 1.4
BRAF-201ENST00000288602 OSBPL3Q9H4L5 887 aa23.77■■□□□ 1.4
BRAF-201ENST00000288602 MX1P20591 662 aa23.77■■□□□ 1.4
BRAF-201ENST00000288602 PIP4K2AP48426 406 aaPredicted RBP23.77■■□□□ 1.4
BRAF-201ENST00000288602 PDIA6Q15084 440 aa23.77■■□□□ 1.4
BRAF-201ENST00000288602 PRDM11Q9NQV5 511 aa23.77■■□□□ 1.4
BRAF-201ENST00000288602 SCN11AQ9UI33 1791 aa23.77■■□□□ 1.4
BRAF-201ENST00000288602 KSR2Q6VAB6 950 aa23.76■■□□□ 1.39
BRAF-201ENST00000288602 ZNF496Q96IT1 587 aaPredicted RBP23.76■■□□□ 1.39
BRAF-201ENST00000288602 NUTM1Q86Y26 1132 aa23.75■■□□□ 1.39
BRAF-201ENST00000288602 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.75■■□□□ 1.392e-6■■□□□ 12.2
BRAF-201ENST00000288602 POLA2Q14181 598 aa23.75■■□□□ 1.39
BRAF-201ENST00000288602 USP26Q9BXU7 913 aa23.75■■□□□ 1.39
BRAF-201ENST00000288602 HYPKQ9NX55 129 aa23.75■■□□□ 1.39
BRAF-201ENST00000288602 C9orf78Q9NZ63 289 aaPredicted RBP23.75■■□□□ 1.39
BRAF-201ENST00000288602 CPDO75976 1380 aa23.75■■□□□ 1.39
BRAF-201ENST00000288602 SNX21Q969T3 373 aa23.74■■□□□ 1.39
BRAF-201ENST00000288602 DDX21Q9NR30 783 aaKnown RBP eCLIP23.74■■□□□ 1.39
BRAF-201ENST00000288602 CASC1Q6TDU7 716 aa23.73■■□□□ 1.39
BRAF-201ENST00000288602 TOM1L2Q6ZVM7 507 aa23.73■■□□□ 1.39
BRAF-201ENST00000288602 DCAF5Q96JK2 942 aa23.73■■□□□ 1.39
BRAF-201ENST00000288602 USP16Q9Y5T5 823 aa23.73■■□□□ 1.39
BRAF-201ENST00000288602 TRIM6-TRIM34B2RNG4 842 aa23.72■■□□□ 1.39
BRAF-201ENST00000288602 RILPL2Q969X0 211 aa23.72■■□□□ 1.39
BRAF-201ENST00000288602 FOXD4L1Q9NU39 408 aa23.72■■□□□ 1.39
BRAF-201ENST00000288602 C5P01031 1676 aa23.72■■□□□ 1.39
BRAF-201ENST00000288602 SOS2Q07890 1332 aaPredicted RBP23.71■■□□□ 1.39
BRAF-201ENST00000288602 HSP90AB1P08238 724 aaKnown RBP23.71■■□□□ 1.39
BRAF-201ENST00000288602 UNC5CLQ8IV45 518 aa23.71■■□□□ 1.39
BRAF-201ENST00000288602 TTC5Q8N0Z6 440 aa23.71■■□□□ 1.39
BRAF-201ENST00000288602 RHPN1Q8TCX5 695 aa23.71■■□□□ 1.39
BRAF-201ENST00000288602 CABP4P57796 275 aa23.7■■□□□ 1.38
BRAF-201ENST00000288602 RIC3Q7Z5B4 369 aa23.69■■□□□ 1.38
BRAF-201ENST00000288602 MAP4K4O95819 1239 aaPredicted RBP23.69■■□□□ 1.38
BRAF-201ENST00000288602 XAGE3Q8WTP9 111 aa23.69■■□□□ 1.38
BRAF-201ENST00000288602 STRN4Q9NRL3 753 aa23.69■■□□□ 1.38
BRAF-201ENST00000288602 ALDH1L1O75891 902 aa23.68■■□□□ 1.38
BRAF-201ENST00000288602 COPS6Q7L5N1 327 aa23.68■■□□□ 1.38
BRAF-201ENST00000288602 WDR17Q8IZU2 1322 aa23.68■■□□□ 1.38
BRAF-201ENST00000288602 DDX58O95786 925 aaKnown RBP23.68■■□□□ 1.38
BRAF-201ENST00000288602 PA2G4Q9UQ80 394 aaKnown RBP23.68■■□□□ 1.38
BRAF-201ENST00000288602 ERC2O15083 957 aa23.67■■□□□ 1.38
BRAF-201ENST00000288602 RAB11FIP3O75154 756 aa23.67■■□□□ 1.38
BRAF-201ENST00000288602 STAP2Q9UGK3 403 aa23.67■■□□□ 1.38
BRAF-201ENST00000288602 LINS1Q8NG48 757 aa23.67■■□□□ 1.38
BRAF-201ENST00000288602 CHMP5Q9NZZ3 219 aa23.67■■□□□ 1.38
BRAF-201ENST00000288602 IGKV5-2P06315 115 aa23.66■■□□□ 1.38
BRAF-201ENST00000288602 OS9Q13438 667 aaPredicted RBP23.66■■□□□ 1.38
BRAF-201ENST00000288602 SNRPA1P09661 255 aaKnown RBP23.66■■□□□ 1.38
BRAF-201ENST00000288602 KIF1BPQ96EK5 621 aa23.66■■□□□ 1.38
BRAF-201ENST00000288602 SUCLG2Q96I99 432 aa23.66■■□□□ 1.38
BRAF-201ENST00000288602 PKD1L3Q7Z443 1732 aa23.65■■□□□ 1.38
BRAF-201ENST00000288602 GRM8O00222 908 aa23.65■■□□□ 1.38
BRAF-201ENST00000288602 GSE1Q14687 1217 aa23.65■■□□□ 1.38
BRAF-201ENST00000288602 K7ELQ4 463 aaPredicted RBP23.65■■□□□ 1.38
BRAF-201ENST00000288602 REC8O95072 547 aa23.65■■□□□ 1.38
BRAF-201ENST00000288602 ABCC6O95255 1503 aa23.65■■□□□ 1.38
BRAF-201ENST00000288602 ZCRB1Q8TBF4 217 aaKnown RBP23.65■■□□□ 1.38
BRAF-201ENST00000288602 KAZALD1Q96I82 304 aa23.65■■□□□ 1.38
BRAF-201ENST00000288602 FMNL2Q96PY5 1086 aa23.65■■□□□ 1.38
BRAF-201ENST00000288602 TUBGCP6Q96RT7 1819 aa23.64■■□□□ 1.38
BRAF-201ENST00000288602 HSP90AA1P07900 732 aaKnown RBP23.64■■□□□ 1.37
BRAF-201ENST00000288602 LARP1Q6PKG0 1096 aaKnown RBP23.64■■□□□ 1.37
BRAF-201ENST00000288602 DDX54Q8TDD1 881 aaKnown RBP23.64■■□□□ 1.37
BRAF-201ENST00000288602 JARID2Q92833 1246 aaPredicted RBP23.64■■□□□ 1.37
BRAF-201ENST00000288602 MYD88Q99836 296 aa23.64■■□□□ 1.37
BRAF-201ENST00000288602 COL5A2P05997 1499 aaPredicted RBP23.63■■□□□ 1.37
BRAF-201ENST00000288602 BICC1Q9H694 974 aaKnown RBP23.63■■□□□ 1.37
BRAF-201ENST00000288602 CHMLP26374 656 aa23.62■■□□□ 1.37
BRAF-201ENST00000288602 EIF5BO60841 1220 aaKnown RBP23.62■■□□□ 1.37
BRAF-201ENST00000288602 ESYT1Q9BSJ8 1104 aa23.62■■□□□ 1.37
BRAF-201ENST00000288602 DDIT3P35638 169 aa23.61■■□□□ 1.37
BRAF-201ENST00000288602 MTX1Q13505 466 aa23.61■■□□□ 1.37
BRAF-201ENST00000288602 RABEP1Q15276 862 aa23.61■■□□□ 1.37
BRAF-201ENST00000288602 LRP10Q7Z4F1 713 aa23.61■■□□□ 1.37
BRAF-201ENST00000288602 MRC1P22897 1456 aa23.61■■□□□ 1.37
BRAF-201ENST00000288602 PI4K2BQ8TCG2 481 aa23.61■■□□□ 1.37
BRAF-201ENST00000288602 EVA1CP58658 441 aa23.6■■□□□ 1.37
BRAF-201ENST00000288602 ANKRD13DQ6ZTN6 518 aa23.6■■□□□ 1.37
BRAF-201ENST00000288602 IL25Q9H293 177 aa23.6■■□□□ 1.37
BRAF-201ENST00000288602 PCDH11XQ9BZA7 1347 aa23.6■■□□□ 1.37
BRAF-201ENST00000288602 PCDH11YQ9BZA8 1340 aa23.6■■□□□ 1.37
BRAF-201ENST00000288602 NEURL1BA8MQ27 555 aa23.6■■□□□ 1.37
BRAF-201ENST00000288602 NEXNQ0ZGT2 675 aa23.59■■□□□ 1.37
BRAF-201ENST00000288602 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.59■■□□□ 1.37
BRAF-201ENST00000288602 IL2RBP14784 551 aa23.58■■□□□ 1.37
BRAF-201ENST00000288602 HSP90AB4PQ58FF6 505 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms