RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 RFC4P35249 363 aa33.07■■■□□ 2.88
PDF-201ENST00000288022 TEX13AQ9BXU3 409 aaPredicted RBP33.07■■■□□ 2.88
PDF-201ENST00000288022 PNISRQ8TF01 805 aaKnown RBP33.06■■■□□ 2.88
PDF-201ENST00000288022 KLHL34Q8N239 644 aa33.04■■■□□ 2.88
PDF-201ENST00000288022 FHDC1Q9C0D6 1143 aaPredicted RBP33.04■■■□□ 2.88
PDF-201ENST00000288022 C4AP0C0L4 1744 aa33.03■■■□□ 2.88
PDF-201ENST00000288022 ZBTB1Q9Y2K1 713 aa33.03■■■□□ 2.88
PDF-201ENST00000288022 CANXP27824 592 aaKnown RBP33.02■■■□□ 2.88
PDF-201ENST00000288022 KDM3BQ7LBC6 1761 aa33.01■■■□□ 2.87
PDF-201ENST00000288022 SOS1Q07889 1333 aaPredicted RBP33.01■■■□□ 2.87
PDF-201ENST00000288022 SNRPA1P09661 255 aaKnown RBP33■■■□□ 2.87
PDF-201ENST00000288022 APAF1O14727 1248 aa32.98■■■□□ 2.87
PDF-201ENST00000288022 SYT17Q9BSW7 474 aa32.98■■■□□ 2.87
PDF-201ENST00000288022 COL15A1P39059 1388 aa32.97■■■□□ 2.87
PDF-201ENST00000288022 SRP68Q9UHB9 627 aaKnown RBP32.97■■■□□ 2.87
PDF-201ENST00000288022 TSPYL4Q9UJ04 414 aa32.97■■■□□ 2.87
PDF-201ENST00000288022 TRIM35Q9UPQ4 493 aa32.97■■■□□ 2.87
PDF-201ENST00000288022 PRAMEF22A3QJZ6 481 aa32.96■■■□□ 2.87
PDF-201ENST00000288022 NLGN1Q8N2Q7 840 aa32.96■■■□□ 2.87
PDF-201ENST00000288022 USP16Q9Y5T5 823 aa32.96■■■□□ 2.87
PDF-201ENST00000288022 GYS1P13807 737 aa32.95■■■□□ 2.87
PDF-201ENST00000288022 ZNF330Q9Y3S2 320 aaPredicted RBP32.95■■■□□ 2.87
PDF-201ENST00000288022 USP42Q9H9J4 1324 aaKnown RBP32.95■■■□□ 2.86
PDF-201ENST00000288022 ZPR1O75312 459 aa32.94■■■□□ 2.86
PDF-201ENST00000288022 A1BGP04217 495 aa32.94■■■□□ 2.86
PDF-201ENST00000288022 MMP10P09238 476 aa32.92■■■□□ 2.86
PDF-201ENST00000288022 EIF4A1P60842 406 aaKnown RBP32.92■■■□□ 2.86
PDF-201ENST00000288022 NPM2Q86SE8 214 aaKnown RBP32.92■■■□□ 2.86
PDF-201ENST00000288022 LAS1LQ9Y4W2 734 aaKnown RBP32.92■■■□□ 2.86
PDF-201ENST00000288022 EIF5P55010 431 aaKnown RBP32.9■■■□□ 2.86
PDF-201ENST00000288022 USPL1Q5W0Q7 1092 aa32.9■■■□□ 2.86
PDF-201ENST00000288022 BABAM1Q9NWV8 329 aa32.9■■■□□ 2.86
PDF-201ENST00000288022 A0A087WZG4 1122 aa32.89■■■□□ 2.86
PDF-201ENST00000288022 NARFQ9UHQ1 456 aa32.89■■■□□ 2.86
PDF-201ENST00000288022 LAMB4A4D0S4 1761 aa32.88■■■□□ 2.85
PDF-201ENST00000288022 DCAF8L1A6NGE4 600 aa32.88■■■□□ 2.85
PDF-201ENST00000288022 IL6STP40189 918 aaPredicted RBP32.88■■■□□ 2.85
PDF-201ENST00000288022 PIP4K2AP48426 406 aaPredicted RBP32.88■■■□□ 2.85
PDF-201ENST00000288022 GIGYF1O75420 1035 aaPredicted RBP32.87■■■□□ 2.85
PDF-201ENST00000288022 FKBP8Q14318 412 aa32.87■■■□□ 2.85
PDF-201ENST00000288022 SENP3-EIF4A1A0A087X0R7 540 aa32.85■■■□□ 2.85
PDF-201ENST00000288022 PARP3Q9Y6F1 533 aa32.85■■■□□ 2.85
PDF-201ENST00000288022 FAM9BQ8IZU0 186 aa32.83■■■□□ 2.85
PDF-201ENST00000288022 NLGN2Q8NFZ4 835 aa32.83■■■□□ 2.85
PDF-201ENST00000288022 TBC1D2BQ9UPU7 963 aa32.83■■■□□ 2.85
PDF-201ENST00000288022 CD2APQ9Y5K6 639 aa32.83■■■□□ 2.85
PDF-201ENST00000288022 CHL1O00533 1208 aa32.82■■■□□ 2.84
PDF-201ENST00000288022 CALD1Q05682 793 aaKnown RBP32.81■■■□□ 2.84
PDF-201ENST00000288022 NBPF26B4DH59 902 aa32.79■■■□□ 2.84
PDF-201ENST00000288022 NBPF10Q6P3W6 841 aaKnown RBP32.79■■■□□ 2.84
PDF-201ENST00000288022 NBPF15Q8N660 670 aa32.79■■■□□ 2.84
PDF-201ENST00000288022 DZIP3Q86Y13 1208 aaKnown RBP32.78■■■□□ 2.84
PDF-201ENST00000288022 CFAP44Q96MT7 982 aa32.78■■■□□ 2.84
PDF-201ENST00000288022 BCL2L12Q9HB09 334 aa32.78■■■□□ 2.84
PDF-201ENST00000288022 SCN7AQ01118 1682 aa32.78■■■□□ 2.84
PDF-201ENST00000288022 DDR1Q08345 913 aa32.76■■■□□ 2.83
PDF-201ENST00000288022 EIF2S2P20042 333 aaKnown RBP32.75■■■□□ 2.83
PDF-201ENST00000288022 TM4SF1P30408 202 aa32.75■■■□□ 2.83
PDF-201ENST00000288022 NFIXQ14938 502 aa32.75■■■□□ 2.83
PDF-201ENST00000288022 PELP1Q8IZL8 1130 aaKnown RBP32.75■■■□□ 2.83
PDF-201ENST00000288022 GNAI1P63096 354 aa32.74■■■□□ 2.83
PDF-201ENST00000288022 BICDL1Q6ZP65 573 aa32.74■■■□□ 2.83
PDF-201ENST00000288022 IFT57Q9NWB7 429 aa32.74■■■□□ 2.83
PDF-201ENST00000288022 NGEFQ8N5V2 710 aa32.73■■■□□ 2.83
PDF-201ENST00000288022 MBIPQ9NS73 344 aa32.73■■■□□ 2.83
PDF-201ENST00000288022 POLRMTO00411 1230 aaKnown RBP32.72■■■□□ 2.83
PDF-201ENST00000288022 CAMTA2O94983 1202 aa32.72■■■□□ 2.83
PDF-201ENST00000288022 MYL6BP14649 208 aa32.72■■■□□ 2.83
PDF-201ENST00000288022 GPR162Q16538 588 aa32.72■■■□□ 2.83
PDF-201ENST00000288022 KRT24Q2M2I5 525 aa32.72■■■□□ 2.83
PDF-201ENST00000288022 BCORQ6W2J9 1755 aa32.71■■■□□ 2.83
PDF-201ENST00000288022 CCDC27Q2M243 656 aa32.71■■■□□ 2.83
PDF-201ENST00000288022 SALL2Q9Y467 1007 aaPredicted RBP32.71■■■□□ 2.83
PDF-201ENST00000288022 C10orf71Q711Q0 1435 aa32.7■■■□□ 2.83
PDF-201ENST00000288022 ZNF853P0CG23 659 aa32.7■■■□□ 2.83
PDF-201ENST00000288022 TBC1D9BQ66K14 1250 aa32.69■■■□□ 2.82
PDF-201ENST00000288022 WWC1Q8IX03 1113 aa32.69■■■□□ 2.82
PDF-201ENST00000288022 NECTIN2Q92692 538 aa32.69■■■□□ 2.82
PDF-201ENST00000288022 ERBB4Q15303 1308 aa32.69■■■□□ 2.82
PDF-201ENST00000288022 KIF13BQ9NQT8 1826 aa32.68■■■□□ 2.82
PDF-201ENST00000288022 ZNF652Q9Y2D9 606 aa32.67■■■□□ 2.82
PDF-201ENST00000288022 SERPINB2P05120 415 aa32.66■■■□□ 2.82
PDF-201ENST00000288022 NCBP3Q53F19 620 aaKnown RBP32.65■■■□□ 2.82
PDF-201ENST00000288022 AFDNP55196 1824 aaKnown RBP32.64■■■□□ 2.82
PDF-201ENST00000288022 TGFB2P61812 414 aa32.64■■■□□ 2.82
PDF-201ENST00000288022 KIF6Q6ZMV9 814 aa32.64■■■□□ 2.82
PDF-201ENST00000288022 WWC3Q9ULE0 1092 aa32.64■■■□□ 2.82
PDF-201ENST00000288022 DUSP27Q5VZP5 1158 aa32.63■■■□□ 2.81
PDF-201ENST00000288022 DIEXFQ68CQ4 756 aaKnown RBP32.63■■■□□ 2.81
PDF-201ENST00000288022 CLEC4GQ6UXB4 293 aa32.63■■■□□ 2.81
PDF-201ENST00000288022 SETDB2Q96T68 719 aa32.63■■■□□ 2.81
PDF-201ENST00000288022 PXDNLA1KZ92 1463 aa32.62■■■□□ 2.81
PDF-201ENST00000288022 CARMIL3Q8ND23 1372 aa32.62■■■□□ 2.81
PDF-201ENST00000288022 HOXB7P09629 217 aa32.62■■■□□ 2.81
PDF-201ENST00000288022 HDGFL1Q5TGJ6 251 aa32.62■■■□□ 2.81
PDF-201ENST00000288022 N4BP2Q86UW6 1770 aaPredicted RBP32.61■■■□□ 2.81
PDF-201ENST00000288022 NRXN2Q9P2S2 1712 aa32.61■■■□□ 2.81
PDF-201ENST00000288022 CCER2I3L3R5 266 aa32.61■■■□□ 2.81
PDF-201ENST00000288022 ANXA1P04083 346 aa32.61■■■□□ 2.81
PDF-201ENST00000288022 PDIA6Q15084 440 aa32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 470.9 ms