RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 PNMA6EA0A0J9YXQ4 647 aa30.72■■■□□ 2.51
ROM1-201ENST00000278833 EXOC6BQ9Y2D4 811 aa30.72■■■□□ 2.51
ROM1-201ENST00000278833 APBB1O00213 710 aa30.71■■■□□ 2.51
ROM1-201ENST00000278833 EIF4A1P60842 406 aaKnown RBP30.71■■■□□ 2.51
ROM1-201ENST00000278833 RAB11FIP3O75154 756 aa30.7■■■□□ 2.51
ROM1-201ENST00000278833 POLA2Q14181 598 aa30.7■■■□□ 2.5
ROM1-201ENST00000278833 LRRFIP2Q9Y608 721 aaKnown RBP30.7■■■□□ 2.5
ROM1-201ENST00000278833 GOLGA6L22H0YM25 854 aa30.69■■■□□ 2.5
ROM1-201ENST00000278833 UBTFL1P0CB47 393 aaPredicted RBP30.69■■■□□ 2.5
ROM1-201ENST00000278833 ANAPC15P60006 121 aa30.69■■■□□ 2.5
ROM1-201ENST00000278833 AKAP4Q5JQC9 854 aa30.69■■■□□ 2.5
ROM1-201ENST00000278833 NBPF6Q5VWK0 638 aa30.69■■■□□ 2.5
ROM1-201ENST00000278833 LTV1Q96GA3 475 aaPredicted RBP30.69■■■□□ 2.5
ROM1-201ENST00000278833 NBPF4Q96M43 638 aa30.69■■■□□ 2.5
ROM1-201ENST00000278833 ALS2Q96Q42 1657 aa30.68■■■□□ 2.5
ROM1-201ENST00000278833 ESYT1Q9BSJ8 1104 aa30.68■■■□□ 2.5
ROM1-201ENST00000278833 SSFA2P28290 1259 aa30.67■■■□□ 2.5
ROM1-201ENST00000278833 MCM2P49736 904 aa30.66■■■□□ 2.5
ROM1-201ENST00000278833 AMOTQ4VCS5 1084 aa30.66■■■□□ 2.5
ROM1-201ENST00000278833 USHBP1Q8N6Y0 703 aa30.65■■■□□ 2.5
ROM1-201ENST00000278833 RTN4Q9NQC3 1192 aaKnown RBP30.65■■■□□ 2.5
ROM1-201ENST00000278833 AK9Q5TCS8 1911 aa30.65■■■□□ 2.5
ROM1-201ENST00000278833 BAG4O95429 457 aaKnown RBP30.65■■■□□ 2.5
ROM1-201ENST00000278833 GZF1Q9H116 711 aaPredicted RBP30.65■■■□□ 2.5
ROM1-201ENST00000278833 PLEKHG5O94827 1062 aa30.64■■■□□ 2.5
ROM1-201ENST00000278833 PLEKHO1Q53GL0 409 aaPredicted RBP30.63■■■□□ 2.49
ROM1-201ENST00000278833 HEG1Q9ULI3 1381 aa30.63■■■□□ 2.49
ROM1-201ENST00000278833 CHMLP26374 656 aa30.63■■■□□ 2.49
ROM1-201ENST00000278833 ABCC6O95255 1503 aa30.63■■■□□ 2.49
ROM1-201ENST00000278833 SPATA31A6Q5VVP1 1343 aa30.62■■■□□ 2.49
ROM1-201ENST00000278833 MCCP23508 829 aa30.62■■■□□ 2.49
ROM1-201ENST00000278833 KLHL40Q2TBA0 621 aa30.62■■■□□ 2.49
ROM1-201ENST00000278833 ARHGEF25Q86VW2 580 aa30.62■■■□□ 2.49
ROM1-201ENST00000278833 CABLES1Q8TDN4 633 aa30.62■■■□□ 2.49
ROM1-201ENST00000278833 GRPEL1Q9HAV7 217 aa30.62■■■□□ 2.49
ROM1-201ENST00000278833 COL22A1Q8NFW1 1626 aaPredicted RBP30.62■■■□□ 2.49
ROM1-201ENST00000278833 FOXD4L1Q9NU39 408 aa30.61■■■□□ 2.49
ROM1-201ENST00000278833 NUTM2BA6NNL0 878 aaPredicted RBP30.61■■■□□ 2.49
ROM1-201ENST00000278833 NUTM2EB1AL46 878 aaPredicted RBP30.61■■■□□ 2.49
ROM1-201ENST00000278833 NUTM2AQ8IVF1 878 aaPredicted RBP30.61■■■□□ 2.49
ROM1-201ENST00000278833 NECTIN2Q92692 538 aa30.61■■■□□ 2.49
ROM1-201ENST00000278833 PHAXQ9H814 394 aaKnown RBP30.61■■■□□ 2.49
ROM1-201ENST00000278833 BEND3Q5T5X7 828 aa30.6■■■□□ 2.49
ROM1-201ENST00000278833 USP42Q9H9J4 1324 aaKnown RBP30.59■■■□□ 2.49
ROM1-201ENST00000278833 DNAAF4Q8WXU2 420 aa30.59■■■□□ 2.49
ROM1-201ENST00000278833 PLEKHG2Q9H7P9 1386 aa30.58■■■□□ 2.49
ROM1-201ENST00000278833 LGR6Q9HBX8 967 aa30.58■■■□□ 2.49
ROM1-201ENST00000278833 MTX1Q13505 466 aa30.57■■■□□ 2.48
ROM1-201ENST00000278833 ZNF530Q6P9A1 599 aaPredicted RBP30.57■■■□□ 2.48
ROM1-201ENST00000278833 ADCY9O60503 1353 aa30.57■■■□□ 2.48
ROM1-201ENST00000278833 TEFQ10587 303 aa30.56■■■□□ 2.48
ROM1-201ENST00000278833 HSP90AB4PQ58FF6 505 aa30.56■■■□□ 2.48
ROM1-201ENST00000278833 PPP1R42Q7Z4L9 355 aa30.56■■■□□ 2.48
ROM1-201ENST00000278833 RNMTO43148 476 aaKnown RBP30.55■■■□□ 2.48
ROM1-201ENST00000278833 CUL4AQ13619 759 aa30.55■■■□□ 2.48
ROM1-201ENST00000278833 KIF1BPQ96EK5 621 aa30.55■■■□□ 2.48
ROM1-201ENST00000278833 CHPF2Q9P2E5 772 aa30.55■■■□□ 2.48
ROM1-201ENST00000278833 LRP6O75581 1613 aa30.55■■■□□ 2.48
ROM1-201ENST00000278833 GCP02774 474 aa30.54■■■□□ 2.48
ROM1-201ENST00000278833 BTBD11A6QL63 1104 aa30.53■■■□□ 2.48
ROM1-201ENST00000278833 ALDH1L1O75891 902 aa30.53■■■□□ 2.48
ROM1-201ENST00000278833 RHPN1Q8TCX5 695 aa30.53■■■□□ 2.48
ROM1-201ENST00000278833 INTS4Q96HW7 963 aaKnown RBP30.53■■■□□ 2.48
ROM1-201ENST00000278833 DBF4Q9UBU7 674 aaPredicted RBP30.53■■■□□ 2.48
ROM1-201ENST00000278833 PI4K2BQ8TCG2 481 aa30.52■■■□□ 2.48
ROM1-201ENST00000278833 TSHZ3Q63HK5 1081 aa30.51■■■□□ 2.47
ROM1-201ENST00000278833 PANK2Q9BZ23 570 aa30.51■■■□□ 2.47
ROM1-201ENST00000278833 HDAC5Q9UQL6 1122 aa30.51■■■□□ 2.47
ROM1-201ENST00000278833 ADAMTS2O95450 1211 aa30.5■■■□□ 2.47
ROM1-201ENST00000278833 C1orf141Q5JVX7 400 aa30.5■■■□□ 2.47
ROM1-201ENST00000278833 ABCA3Q99758 1704 aa30.49■■■□□ 2.47
ROM1-201ENST00000278833 PI4KAP2A4QPH2 592 aa30.49■■■□□ 2.47
ROM1-201ENST00000278833 TRIM6-TRIM34B2RNG4 842 aa30.49■■■□□ 2.47
ROM1-201ENST00000278833 PI4KAP1Q8N8J0 262 aa30.49■■■□□ 2.47
ROM1-201ENST00000278833 SCN11AQ9UI33 1791 aa30.49■■■□□ 2.47
ROM1-201ENST00000278833 TTC41PQ6P2S7 1318 aa30.49■■■□□ 2.47
ROM1-201ENST00000278833 SURF6O75683 361 aaKnown RBP30.48■■■□□ 2.47
ROM1-201ENST00000278833 EIF2S2P20042 333 aaKnown RBP30.48■■■□□ 2.47
ROM1-201ENST00000278833 RILPL2Q969X0 211 aa30.48■■■□□ 2.47
ROM1-201ENST00000278833 TMX3Q96JJ7 454 aa30.48■■■□□ 2.47
ROM1-201ENST00000278833 LMBRD1Q9NUN5 540 aa30.48■■■□□ 2.47
ROM1-201ENST00000278833 SRGAP3O43295 1099 aa30.47■■■□□ 2.47
ROM1-201ENST00000278833 KCNQ3O43525 872 aa30.47■■■□□ 2.47
ROM1-201ENST00000278833 NBPF7P0C2Y1 421 aaPredicted RBP30.47■■■□□ 2.47
ROM1-201ENST00000278833 NEK4P51957 841 aa30.47■■■□□ 2.47
ROM1-201ENST00000278833 ZNF445P59923 1031 aa30.47■■■□□ 2.47
ROM1-201ENST00000278833 ZGPATQ8N5A5 531 aaKnown RBP30.47■■■□□ 2.47
ROM1-201ENST00000278833 ANKRD24Q8TF21 1146 aa30.47■■■□□ 2.47
ROM1-201ENST00000278833 GAS2L3Q86XJ1 694 aa30.46■■■□□ 2.47
ROM1-201ENST00000278833 UNC5CLQ8IV45 518 aa30.46■■■□□ 2.47
ROM1-201ENST00000278833 ZDHHC9Q9Y397 364 aa30.46■■■□□ 2.47
ROM1-201ENST00000278833 RGPD5Q99666 1765 aa30.46■■■□□ 2.47
ROM1-201ENST00000278833 GIGYF1O75420 1035 aaPredicted RBP30.46■■■□□ 2.47
ROM1-201ENST00000278833 HSPA4P34932 840 aa30.46■■■□□ 2.47
ROM1-201ENST00000278833 ANO2Q9NQ90 1003 aa30.46■■■□□ 2.47
ROM1-201ENST00000278833 DDX49Q9Y6V7 483 aaKnown RBP30.46■■■□□ 2.47
ROM1-201ENST00000278833 PALD1Q9ULE6 856 aa30.45■■■□□ 2.47
ROM1-201ENST00000278833 MEX3CQ5U5Q3 659 aaKnown RBP30.44■■■□□ 2.46
ROM1-201ENST00000278833 UTYO14607 1347 aa30.44■■■□□ 2.46
ROM1-201ENST00000278833 RAD50Q92878 1312 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms