RNA–Protein interactions for RNA: ENST00000272902.9

SUMF1-201, Transcript of sulfatase modifying factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMF1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF1-201ENST00000272902 FMNL2Q96PY5 1086 aa27.57■■■□□ 2
SUMF1-201ENST00000272902 UBR2Q8IWV8 1755 aa27.57■■■□□ 2
SUMF1-201ENST00000272902 DDX21Q9NR30 783 aaKnown RBP eCLIP27.56■■■□□ 2
SUMF1-201ENST00000272902 USP16Q9Y5T5 823 aa27.56■■■□□ 2
SUMF1-201ENST00000272902 PAPPAQ13219 1627 aa27.56■■■□□ 2
SUMF1-201ENST00000272902 SNRPA1P09661 255 aaKnown RBP27.55■■■□□ 2
SUMF1-201ENST00000272902 USP44Q9H0E7 712 aa27.55■■■□□ 2
SUMF1-201ENST00000272902 HYPKQ9NX55 129 aa27.55■■■□□ 2
SUMF1-201ENST00000272902 GNAI2P04899 355 aa27.55■■■□□ 2
SUMF1-201ENST00000272902 SRCIN1Q9C0H9 1055 aa27.55■■■□□ 2
SUMF1-201ENST00000272902 DCTPP1Q9H773 170 aa27.55■■■□□ 2
SUMF1-201ENST00000272902 LAMB4A4D0S4 1761 aa27.54■■■□□ 2
SUMF1-201ENST00000272902 GNAI3P08754 354 aa27.54■■■□□ 2
SUMF1-201ENST00000272902 BEND3Q5T5X7 828 aa27.53■■■□□ 2
SUMF1-201ENST00000272902 NPM2Q86SE8 214 aaKnown RBP27.52■■■□□ 2
SUMF1-201ENST00000272902 MAP3K2Q9Y2U5 619 aa27.52■■■□□ 2
SUMF1-201ENST00000272902 MYL6BP14649 208 aa27.52■■■□□ 2
SUMF1-201ENST00000272902 AIMP1Q12904 312 aaKnown RBP27.51■■□□□ 1.99
SUMF1-201ENST00000272902 ITGB4P16144 1822 aa27.51■■□□□ 1.99
SUMF1-201ENST00000272902 KSR2Q6VAB6 950 aa27.5■■□□□ 1.99
SUMF1-201ENST00000272902 KCPQ6ZWJ8 1503 aa27.5■■□□□ 1.99
SUMF1-201ENST00000272902 PIP4K2AP48426 406 aaPredicted RBP27.5■■□□□ 1.99
SUMF1-201ENST00000272902 LRRFIP2Q9Y608 721 aaKnown RBP27.49■■□□□ 1.99
SUMF1-201ENST00000272902 UBTFL1P0CB47 393 aaPredicted RBP27.48■■□□□ 1.99
SUMF1-201ENST00000272902 KAT6BQ8WYB5 2073 aa27.48■■□□□ 1.99
SUMF1-201ENST00000272902 NWD2Q9ULI1 1742 aa27.47■■□□□ 1.99
SUMF1-201ENST00000272902 ANP32AP39687 249 aaKnown RBP27.47■■□□□ 1.99
SUMF1-201ENST00000272902 NBPF7P0C2Y1 421 aaPredicted RBP27.46■■□□□ 1.99
SUMF1-201ENST00000272902 TMOD3Q9NYL9 352 aa27.46■■□□□ 1.99
SUMF1-201ENST00000272902 SPATA31A1Q5TZJ5 1347 aa27.46■■□□□ 1.99
SUMF1-201ENST00000272902 HMMRO75330 724 aa27.46■■□□□ 1.99
SUMF1-201ENST00000272902 LRP10Q7Z4F1 713 aa27.46■■□□□ 1.99
SUMF1-201ENST00000272902 PNMA6EA0A0J9YXQ4 647 aa27.45■■□□□ 1.99
SUMF1-201ENST00000272902 PTCD1O75127 700 aaKnown RBP27.45■■□□□ 1.99
SUMF1-201ENST00000272902 XAGE3Q8WTP9 111 aa27.45■■□□□ 1.99
SUMF1-201ENST00000272902 TNS2Q63HR2 1409 aa27.45■■□□□ 1.98
SUMF1-201ENST00000272902 EXOC5O00471 708 aa27.45■■□□□ 1.98
SUMF1-201ENST00000272902 DDX58O95786 925 aaKnown RBP27.45■■□□□ 1.98
SUMF1-201ENST00000272902 COPS6Q7L5N1 327 aa27.44■■□□□ 1.98
SUMF1-201ENST00000272902 SLIT2O94813 1529 aa27.44■■□□□ 1.98
SUMF1-201ENST00000272902 ATP8B2P98198 1209 aa27.43■■□□□ 1.98
SUMF1-201ENST00000272902 CWF19L2Q2TBE0 894 aaKnown RBP27.43■■□□□ 1.98
SUMF1-201ENST00000272902 APBB1O00213 710 aa27.43■■□□□ 1.98
SUMF1-201ENST00000272902 MSH5O43196 834 aa27.43■■□□□ 1.98
SUMF1-201ENST00000272902 SEC24BO95487 1268 aa27.43■■□□□ 1.98
SUMF1-201ENST00000272902 BCL11AQ9H165 835 aa27.43■■□□□ 1.98
SUMF1-201ENST00000272902 PIGBQ92521 554 aa27.42■■□□□ 1.98
SUMF1-201ENST00000272902 RIC3Q7Z5B4 369 aa27.41■■□□□ 1.98
SUMF1-201ENST00000272902 SMARCA5O60264 1052 aaPredicted RBP27.4■■□□□ 1.98
SUMF1-201ENST00000272902 ALDH1L1O75891 902 aa27.4■■□□□ 1.98
SUMF1-201ENST00000272902 ARFGEF2Q9Y6D5 1785 aa27.4■■□□□ 1.98
SUMF1-201ENST00000272902 ASAP1Q9ULH1 1129 aa27.39■■□□□ 1.98
SUMF1-201ENST00000272902 LRP6O75581 1613 aa27.39■■□□□ 1.98
SUMF1-201ENST00000272902 C16orf71Q8IYS4 520 aaPredicted RBP27.39■■□□□ 1.97
SUMF1-201ENST00000272902 LINS1Q8NG48 757 aa27.39■■□□□ 1.97
SUMF1-201ENST00000272902 EXOC6BQ9Y2D4 811 aa27.39■■□□□ 1.97
SUMF1-201ENST00000272902 THRAP3Q9Y2W1 955 aaKnown RBP27.39■■□□□ 1.97
SUMF1-201ENST00000272902 SPATA31A5Q5VU36 1347 aa27.39■■□□□ 1.97
SUMF1-201ENST00000272902 SPATA31A7Q8IWB4 1347 aa27.39■■□□□ 1.97
SUMF1-201ENST00000272902 NBPF26B4DH59 902 aa27.38■■□□□ 1.97
SUMF1-201ENST00000272902 NBPF14Q5TI25 921 aa27.38■■□□□ 1.97
SUMF1-201ENST00000272902 NBPF10Q6P3W6 841 aaKnown RBP27.38■■□□□ 1.97
SUMF1-201ENST00000272902 NBPF15Q8N660 670 aa27.38■■□□□ 1.97
SUMF1-201ENST00000272902 AEBP2Q6ZN18 517 aaPredicted RBP27.38■■□□□ 1.97
SUMF1-201ENST00000272902 DOT1LQ8TEK3 1739 aa27.37■■□□□ 1.97
SUMF1-201ENST00000272902 JCADQ9P266 1359 aa27.37■■□□□ 1.97
SUMF1-201ENST00000272902 ANKRD13DQ6ZTN6 518 aa27.37■■□□□ 1.97
SUMF1-201ENST00000272902 C9orf78Q9NZ63 289 aaPredicted RBP27.37■■□□□ 1.97
SUMF1-201ENST00000272902 ZBTB47Q9UFB7 747 aaPredicted RBP27.37■■□□□ 1.97
SUMF1-201ENST00000272902 CCDC9Q9Y3X0 531 aaKnown RBP27.37■■□□□ 1.97
SUMF1-201ENST00000272902 IGKV5-2P06315 115 aa27.36■■□□□ 1.97
SUMF1-201ENST00000272902 CDCA7Q9BWT1 371 aaPredicted RBP27.36■■□□□ 1.97
SUMF1-201ENST00000272902 ATG3Q9NT62 314 aa27.36■■□□□ 1.97
SUMF1-201ENST00000272902 AFDNP55196 1824 aaKnown RBP27.35■■□□□ 1.97
SUMF1-201ENST00000272902 A1BGP04217 495 aa27.35■■□□□ 1.97
SUMF1-201ENST00000272902 PPP1R42Q7Z4L9 355 aa27.35■■□□□ 1.97
SUMF1-201ENST00000272902 PLEKHM2Q8IWE5 1019 aa27.35■■□□□ 1.97
SUMF1-201ENST00000272902 BCL9O00512 1426 aa27.35■■□□□ 1.97
SUMF1-201ENST00000272902 DDB1Q16531 1140 aa27.35■■□□□ 1.97
SUMF1-201ENST00000272902 OTUD7AQ8TE49 926 aaPredicted RBP27.35■■□□□ 1.97
SUMF1-201ENST00000272902 SSH3Q8TE77 659 aa27.35■■□□□ 1.97
SUMF1-201ENST00000272902 C8orf37Q96NL8 207 aa27.35■■□□□ 1.97
SUMF1-201ENST00000272902 ERBB4Q15303 1308 aa27.34■■□□□ 1.97
SUMF1-201ENST00000272902 IPO9Q96P70 1041 aaKnown RBP27.34■■□□□ 1.97
SUMF1-201ENST00000272902 METTL22Q9BUU2 404 aaPredicted RBP27.34■■□□□ 1.97
SUMF1-201ENST00000272902 CERKQ8TCT0 537 aa27.33■■□□□ 1.97
SUMF1-201ENST00000272902 MYD88Q99836 296 aa27.33■■□□□ 1.97
SUMF1-201ENST00000272902 BMP2KLQ5H9B9 411 aa27.33■■□□□ 1.97
SUMF1-201ENST00000272902 SYTL4Q96C24 671 aaPredicted RBP27.33■■□□□ 1.97
SUMF1-201ENST00000272902 NEXNQ0ZGT2 675 aa27.32■■□□□ 1.96
SUMF1-201ENST00000272902 GRM8O00222 908 aa27.32■■□□□ 1.96
SUMF1-201ENST00000272902 NEURL1BA8MQ27 555 aa27.31■■□□□ 1.96
SUMF1-201ENST00000272902 SRGAP3O43295 1099 aa27.31■■□□□ 1.96
SUMF1-201ENST00000272902 POLA2Q14181 598 aa27.31■■□□□ 1.96
SUMF1-201ENST00000272902 UNC5CLQ8IV45 518 aa27.31■■□□□ 1.96
SUMF1-201ENST00000272902 NGLY1Q96IV0 654 aa27.31■■□□□ 1.96
SUMF1-201ENST00000272902 IBTKQ9P2D0 1353 aaPredicted RBP27.31■■□□□ 1.96
SUMF1-201ENST00000272902 NUP188Q5SRE5 1749 aa27.31■■□□□ 1.96
SUMF1-201ENST00000272902 BCL9LQ86UU0 1499 aa27.3■■□□□ 1.96
SUMF1-201ENST00000272902 RBM42Q9BTD8 480 aaKnown RBP27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms