RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 DNAJC21Q5F1R6 531 aaKnown RBP12.42□□□□□ -0.42
CPT1A-201ENST00000265641 FSD1Q9BTV5 496 aa12.42□□□□□ -0.42
CPT1A-201ENST00000265641 PIP4K2BP78356 416 aa12.42□□□□□ -0.42
CPT1A-201ENST00000265641 CFAP70Q5T0N1 1121 aa12.42□□□□□ -0.42
CPT1A-201ENST00000265641 RPRD2Q5VT52 1461 aaKnown RBP12.42□□□□□ -0.42
CPT1A-201ENST00000265641 DDX58O95786 925 aaKnown RBP12.42□□□□□ -0.42
CPT1A-201ENST00000265641 LTV1Q96GA3 475 aaPredicted RBP12.42□□□□□ -0.42
CPT1A-201ENST00000265641 SWAP70Q9UH65 585 aa12.42□□□□□ -0.42
CPT1A-201ENST00000265641 CEBPZQ03701 1054 aaKnown RBP12.42□□□□□ -0.42
CPT1A-201ENST00000265641 CAMSAP2Q08AD1 1489 aa12.41□□□□□ -0.42
CPT1A-201ENST00000265641 GCOM1H8Y6P7 765 aaPredicted RBP12.41□□□□□ -0.42
CPT1A-201ENST00000265641 HSF2BPO75031 334 aa12.41□□□□□ -0.42
CPT1A-201ENST00000265641 MYZAPP0CAP1 466 aa12.41□□□□□ -0.42
CPT1A-201ENST00000265641 INSRP06213 1382 aa12.41□□□□□ -0.42
CPT1A-201ENST00000265641 MPHOSPH10O00566 681 aaKnown RBP12.41□□□□□ -0.42
CPT1A-201ENST00000265641 RIOK3O14730 519 aaKnown RBP12.41□□□□□ -0.42
CPT1A-201ENST00000265641 U2AF2P26368 475 aaKnown RBP eCLIP12.41□□□□□ -0.424e-8■■□□□ 14.1
CPT1A-201ENST00000265641 ARHGAP25P42331 645 aa12.41□□□□□ -0.42
CPT1A-201ENST00000265641 PAFAH1B1P43034 410 aa12.41□□□□□ -0.42
CPT1A-201ENST00000265641 CCDC186Q7Z3E2 898 aa12.41□□□□□ -0.42
CPT1A-201ENST00000265641 ARFGAP2Q8N6H7 521 aa12.41□□□□□ -0.42
CPT1A-201ENST00000265641 SSH1Q8WYL5 1049 aa12.41□□□□□ -0.42
CPT1A-201ENST00000265641 TRMT1Q9NXH9 659 aaKnown RBP12.41□□□□□ -0.42
CPT1A-201ENST00000265641 BCCIPQ9P287 314 aaKnown RBP eCLIP12.41□□□□□ -0.42
CPT1A-201ENST00000265641 RBM27Q9P2N5 1060 aaKnown RBP12.41□□□□□ -0.42
CPT1A-201ENST00000265641 ARHGAP5Q13017 1502 aa12.41□□□□□ -0.42
CPT1A-201ENST00000265641 KIAA0556O60303 1618 aa12.41□□□□□ -0.42
CPT1A-201ENST00000265641 MARCH6O60337 910 aa12.41□□□□□ -0.42
CPT1A-201ENST00000265641 HCLS1P14317 486 aaPredicted RBP12.41□□□□□ -0.42
CPT1A-201ENST00000265641 CCDC121Q6ZUS5 278 aa12.41□□□□□ -0.42
CPT1A-201ENST00000265641 SPATS2Q86XZ4 545 aaKnown RBP12.41□□□□□ -0.42
CPT1A-201ENST00000265641 TAF4BQ92750 862 aa12.41□□□□□ -0.42
CPT1A-201ENST00000265641 NSRP1Q9H0G5 558 aaKnown RBP12.41□□□□□ -0.42
CPT1A-201ENST00000265641 ERICH2A1L162 156 aa12.41□□□□□ -0.42
CPT1A-201ENST00000265641 ATP8B1O43520 1251 aa12.41□□□□□ -0.42
CPT1A-201ENST00000265641 ANAPC15P60006 121 aa12.41□□□□□ -0.42
CPT1A-201ENST00000265641 MSL1Q68DK7 614 aa12.41□□□□□ -0.42
CPT1A-201ENST00000265641 BLOC1S2Q6QNY1 142 aa12.41□□□□□ -0.42
CPT1A-201ENST00000265641 IBTKQ9P2D0 1353 aaPredicted RBP12.4□□□□□ -0.42
CPT1A-201ENST00000265641 KIF5BP33176 963 aa12.4□□□□□ -0.42
CPT1A-201ENST00000265641 HSP90AB2PQ58FF8 381 aa12.4□□□□□ -0.42
CPT1A-201ENST00000265641 TBC1D9Q6ZT07 1266 aa12.4□□□□□ -0.42
CPT1A-201ENST00000265641 DRC1Q96MC2 740 aa12.4□□□□□ -0.42
CPT1A-201ENST00000265641 TMX4Q9H1E5 349 aaPredicted RBP12.4□□□□□ -0.42
CPT1A-201ENST00000265641 LIMCH1Q9UPQ0 1083 aa12.4□□□□□ -0.42
CPT1A-201ENST00000265641 CTAGE15A4D2H0 777 aa12.4□□□□□ -0.42
CPT1A-201ENST00000265641 CTAGE8P0CG41 777 aa12.4□□□□□ -0.42
CPT1A-201ENST00000265641 CTAGE6Q86UF2 777 aa12.4□□□□□ -0.42
CPT1A-201ENST00000265641 CTAGE4Q8IX94 777 aa12.4□□□□□ -0.42
CPT1A-201ENST00000265641 SLC12A5Q9H2X9 1139 aa12.4□□□□□ -0.42
CPT1A-201ENST00000265641 ZNF330Q9Y3S2 320 aaPredicted RBP12.4□□□□□ -0.42
CPT1A-201ENST00000265641 ENOX2Q16206 610 aaKnown RBP12.39□□□□□ -0.43
CPT1A-201ENST00000265641 CCDC30Q5VVM6 783 aa12.39□□□□□ -0.43
CPT1A-201ENST00000265641 TTC12Q9H892 705 aaPredicted RBP12.39□□□□□ -0.43
CPT1A-201ENST00000265641 BCL2L12Q9HB09 334 aa12.39□□□□□ -0.43
CPT1A-201ENST00000265641 MIPOL1Q8TD10 442 aa12.39□□□□□ -0.43
CPT1A-201ENST00000265641 STX6O43752 255 aa12.39□□□□□ -0.43
CPT1A-201ENST00000265641 CDKL5O76039 1030 aa12.39□□□□□ -0.43
CPT1A-201ENST00000265641 CASTP20810 708 aaKnown RBP12.39□□□□□ -0.43
CPT1A-201ENST00000265641 TMPOP42166 694 aaKnown RBP12.39□□□□□ -0.43
CPT1A-201ENST00000265641 AP1ARQ63HQ0 302 aa12.39□□□□□ -0.43
CPT1A-201ENST00000265641 GOLGA5Q8TBA6 731 aa12.39□□□□□ -0.43
CPT1A-201ENST00000265641 ABCC5O15440 1437 aa12.39□□□□□ -0.43
CPT1A-201ENST00000265641 CABP2Q9NPB3 220 aa12.39□□□□□ -0.43
CPT1A-201ENST00000265641 MRVI1Q9Y6F6 885 aa12.39□□□□□ -0.43
CPT1A-201ENST00000265641 GNG11P61952 73 aa12.38□□□□□ -0.43
CPT1A-201ENST00000265641 SEPT7Q16181 437 aaKnown RBP12.38□□□□□ -0.43
CPT1A-201ENST00000265641 NFXL1Q6ZNB6 911 aa12.38□□□□□ -0.43
CPT1A-201ENST00000265641 EPS15P42566 896 aa12.38□□□□□ -0.43
CPT1A-201ENST00000265641 TMC6Q7Z403 805 aa12.38□□□□□ -0.43
CPT1A-201ENST00000265641 INTS4Q96HW7 963 aaKnown RBP12.38□□□□□ -0.43
CPT1A-201ENST00000265641 VPS18Q9P253 973 aa12.38□□□□□ -0.43
CPT1A-201ENST00000265641 MLECQ14165 292 aa12.38□□□□□ -0.43
CPT1A-201ENST00000265641 CAMK4Q16566 473 aa12.38□□□□□ -0.43
CPT1A-201ENST00000265641 USO1O60763 962 aaKnown RBP12.38□□□□□ -0.43
CPT1A-201ENST00000265641 ANKS4BQ8N8V4 417 aa12.37□□□□□ -0.43
CPT1A-201ENST00000265641 JAKMIP1Q96N16 626 aaKnown RBP12.37□□□□□ -0.43
CPT1A-201ENST00000265641 SLC4A2P04920 1241 aa12.37□□□□□ -0.43
CPT1A-201ENST00000265641 ZSCAN22P10073 491 aaPredicted RBP12.37□□□□□ -0.43
CPT1A-201ENST00000265641 SPA17Q15506 151 aa12.37□□□□□ -0.43
CPT1A-201ENST00000265641 ELP1O95163 1332 aa12.37□□□□□ -0.43
CPT1A-201ENST00000265641 ZNF608Q9ULD9 1512 aaPredicted RBP12.37□□□□□ -0.43
CPT1A-201ENST00000265641 GOLIM4O00461 696 aa12.37□□□□□ -0.43
CPT1A-201ENST00000265641 KIF1CO43896 1103 aaKnown RBP12.37□□□□□ -0.43
CPT1A-201ENST00000265641 TRIM27P14373 513 aa12.37□□□□□ -0.43
CPT1A-201ENST00000265641 INPP5BP32019 993 aa12.37□□□□□ -0.43
CPT1A-201ENST00000265641 ZSCAN26Q16670 478 aa12.37□□□□□ -0.43
CPT1A-201ENST00000265641 CCDC12Q8WUD4 166 aaPredicted RBP12.37□□□□□ -0.43
CPT1A-201ENST00000265641 CCDC141Q6ZP82 1450 aa12.37□□□□□ -0.43
CPT1A-201ENST00000265641 CCDC196A0A1B0GTZ2 297 aa12.37□□□□□ -0.43
CPT1A-201ENST00000265641 FAM76AQ8TAV0 307 aa12.37□□□□□ -0.43
CPT1A-201ENST00000265641 PCDHB15Q9Y5E8 787 aa12.37□□□□□ -0.43
CPT1A-201ENST00000265641 C1orf141Q5JVX7 400 aa12.36□□□□□ -0.43
CPT1A-201ENST00000265641 CLNS1AP54105 237 aaKnown RBP12.36□□□□□ -0.43
CPT1A-201ENST00000265641 ZNF830Q96NB3 372 aaPredicted RBP12.36□□□□□ -0.43
CPT1A-201ENST00000265641 RBSNQ9H1K0 784 aa12.36□□□□□ -0.43
CPT1A-201ENST00000265641 SUDS3Q9H7L9 328 aaPredicted RBP12.36□□□□□ -0.43
CPT1A-201ENST00000265641 YEATS4O95619 227 aa12.36□□□□□ -0.43
CPT1A-201ENST00000265641 CCDC172P0C7W6 258 aa12.36□□□□□ -0.43
CPT1A-201ENST00000265641 NAA25Q14CX7 972 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms