RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 WASF1Q92558 559 aa6.61□□□□□ -1.35
VCAN-201ENST00000265077 RBM33Q96EV2 1170 aaKnown RBP6.61□□□□□ -1.35
VCAN-201ENST00000265077 GNL3LQ9NVN8 582 aaKnown RBP6.61□□□□□ -1.35
VCAN-201ENST00000265077 IMMTQ16891 758 aaKnown RBP6.61□□□□□ -1.35
VCAN-201ENST00000265077 HDGFL1Q5TGJ6 251 aa6.61□□□□□ -1.35
VCAN-201ENST00000265077 NEUROD6Q96NK8 337 aa6.61□□□□□ -1.35
VCAN-201ENST00000265077 ZSCAN26Q16670 478 aa6.61□□□□□ -1.35
VCAN-201ENST00000265077 NUTM1Q86Y26 1132 aa6.61□□□□□ -1.35
VCAN-201ENST00000265077 GTF3C6Q969F1 213 aa6.61□□□□□ -1.35
VCAN-201ENST00000265077 CEP131Q9UPN4 1083 aa6.61□□□□□ -1.35
VCAN-201ENST00000265077 RAPGEF4Q8WZA2 1011 aa6.61□□□□□ -1.35
VCAN-201ENST00000265077 C1orf115Q9H7X2 142 aa6.61□□□□□ -1.35
VCAN-201ENST00000265077 BIVM-ERCC5R4GMW8 1640 aa6.61□□□□□ -1.35
VCAN-201ENST00000265077 BAZ2BQ9UIF8 2168 aaKnown RBP6.61□□□□□ -1.35
VCAN-201ENST00000265077 GSDMDP57764 484 aa6.61□□□□□ -1.35
VCAN-201ENST00000265077 ZBTB9Q96C00 473 aa6.61□□□□□ -1.35
VCAN-201ENST00000265077 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.61□□□□□ -1.35
VCAN-201ENST00000265077 EPB41L2O43491 1005 aaKnown RBP6.61□□□□□ -1.35
VCAN-201ENST00000265077 DBN1Q16643 649 aa6.61□□□□□ -1.35
VCAN-201ENST00000265077 PDRG1Q9NUG6 133 aa6.61□□□□□ -1.35
VCAN-201ENST00000265077 CTDP1Q9Y5B0 961 aaPredicted RBP6.61□□□□□ -1.35
VCAN-201ENST00000265077 HSPA4P34932 840 aa6.6□□□□□ -1.35
VCAN-201ENST00000265077 FSD2A1L4K1 749 aa6.6□□□□□ -1.35
VCAN-201ENST00000265077 LRSAM1Q6UWE0 723 aa6.6□□□□□ -1.35
VCAN-201ENST00000265077 CDK5RAP3Q96JB5 506 aa6.6□□□□□ -1.35
VCAN-201ENST00000265077 EIF5P55010 431 aaKnown RBP6.6□□□□□ -1.35
VCAN-201ENST00000265077 CCDC158Q5M9N0 1113 aa6.6□□□□□ -1.35
VCAN-201ENST00000265077 SAMD1Q6SPF0 538 aaPredicted RBP6.6□□□□□ -1.35
VCAN-201ENST00000265077 PRDM4Q9UKN5 801 aa6.6□□□□□ -1.35
VCAN-201ENST00000265077 SEPT14Q6ZU15 432 aa6.6□□□□□ -1.35
VCAN-201ENST00000265077 CCDC148Q8NFR7 591 aa6.6□□□□□ -1.35
VCAN-201ENST00000265077 TSR2Q969E8 191 aaKnown RBP6.6□□□□□ -1.35
VCAN-201ENST00000265077 RPUSD2Q8IZ73 545 aaKnown RBP6.6□□□□□ -1.35
VCAN-201ENST00000265077 TRHP20396 242 aaPredicted RBP6.6□□□□□ -1.35
VCAN-201ENST00000265077 NBPF8Q3BBV2 869 aa6.6□□□□□ -1.35
VCAN-201ENST00000265077 CEP112Q8N8E3 955 aa6.6□□□□□ -1.35
VCAN-201ENST00000265077 U3KPZ7 1027 aaPredicted RBP6.6□□□□□ -1.35
VCAN-201ENST00000265077 FCHSD2O94868 740 aa6.6□□□□□ -1.35
VCAN-201ENST00000265077 FMNL2Q96PY5 1086 aa6.6□□□□□ -1.35
VCAN-201ENST00000265077 NACAP1Q9BZK3 213 aa6.6□□□□□ -1.35
VCAN-201ENST00000265077 RAB11FIP3O75154 756 aa6.6□□□□□ -1.35
VCAN-201ENST00000265077 SLC4A2P04920 1241 aa6.6□□□□□ -1.35
VCAN-201ENST00000265077 ZSCAN12O43309 604 aa6.6□□□□□ -1.35
VCAN-201ENST00000265077 THOC2Q8NI27 1593 aaKnown RBP6.6□□□□□ -1.35
VCAN-201ENST00000265077 NUMA1Q14980 2115 aa6.6□□□□□ -1.35
VCAN-201ENST00000265077 PIBF1Q8WXW3 757 aa6.59□□□□□ -1.35
VCAN-201ENST00000265077 DNAJC21Q5F1R6 531 aaKnown RBP6.59□□□□□ -1.35
VCAN-201ENST00000265077 CCDC181Q5TID7 509 aa6.59□□□□□ -1.35
VCAN-201ENST00000265077 CCDC50Q8IVM0 306 aa6.59□□□□□ -1.35
VCAN-201ENST00000265077 TBC1D32Q96NH3 1257 aa6.59□□□□□ -1.35
VCAN-201ENST00000265077 VEZTQ9HBM0 779 aa6.59□□□□□ -1.35
VCAN-201ENST00000265077 SEPT7Q16181 437 aaKnown RBP6.59□□□□□ -1.35
VCAN-201ENST00000265077 RPAP2Q8IXW5 612 aaPredicted RBP6.59□□□□□ -1.35
VCAN-201ENST00000265077 CFAP43Q8NDM7 1665 aa6.59□□□□□ -1.35
VCAN-201ENST00000265077 ERCC3P19447 782 aa6.59□□□□□ -1.35
VCAN-201ENST00000265077 TMPOP42166 694 aaKnown RBP6.59□□□□□ -1.35
VCAN-201ENST00000265077 ANAPC15P60006 121 aa6.59□□□□□ -1.35
VCAN-201ENST00000265077 ARHGAP29Q52LW3 1261 aa6.59□□□□□ -1.35
VCAN-201ENST00000265077 NSD3Q9BZ95 1437 aa6.59□□□□□ -1.35
VCAN-201ENST00000265077 SLU7O95391 586 aaKnown RBP6.59□□□□□ -1.35
VCAN-201ENST00000265077 BAG4O95429 457 aaKnown RBP6.59□□□□□ -1.35
VCAN-201ENST00000265077 DZIP1Q86YF9 867 aaKnown RBP6.59□□□□□ -1.35
VCAN-201ENST00000265077 CCAR1Q8IX12 1150 aaKnown RBP6.59□□□□□ -1.35
VCAN-201ENST00000265077 GOLGA5Q8TBA6 731 aa6.59□□□□□ -1.35
VCAN-201ENST00000265077 JAKMIP1Q96N16 626 aaKnown RBP6.59□□□□□ -1.35
VCAN-201ENST00000265077 SSFA2P28290 1259 aa6.59□□□□□ -1.35
VCAN-201ENST00000265077 CEBPZQ03701 1054 aaKnown RBP6.59□□□□□ -1.35
VCAN-201ENST00000265077 SLC52A1Q9NWF4 448 aa6.59□□□□□ -1.35
VCAN-201ENST00000265077 RIOK3O14730 519 aaKnown RBP6.59□□□□□ -1.36
VCAN-201ENST00000265077 TUBB4AP04350 444 aa6.59□□□□□ -1.36
VCAN-201ENST00000265077 CASTP20810 708 aaKnown RBP6.58□□□□□ -1.36
VCAN-201ENST00000265077 ERO1AQ96HE7 468 aa6.58□□□□□ -1.36
VCAN-201ENST00000265077 SRRTQ9BXP5 876 aaKnown RBP6.58□□□□□ -1.36
VCAN-201ENST00000265077 CAMSAP2Q08AD1 1489 aa6.58□□□□□ -1.36
VCAN-201ENST00000265077 SYCP1Q15431 976 aa6.58□□□□□ -1.36
VCAN-201ENST00000265077 MCTP2Q6DN12 878 aa6.58□□□□□ -1.36
VCAN-201ENST00000265077 NBPF11Q86T75 865 aa6.58□□□□□ -1.36
VCAN-201ENST00000265077 CCDC83Q8IWF9 413 aa6.58□□□□□ -1.36
VCAN-201ENST00000265077 AIMP1Q12904 312 aaKnown RBP6.58□□□□□ -1.36
VCAN-201ENST00000265077 SCLT1Q96NL6 688 aa6.58□□□□□ -1.36
VCAN-201ENST00000265077 BMP2KQ9NSY1 1161 aaPredicted RBP6.58□□□□□ -1.36
VCAN-201ENST00000265077 SNW1Q13573 536 aaKnown RBP6.58□□□□□ -1.36
VCAN-201ENST00000265077 CFAP100Q494V2 611 aa6.58□□□□□ -1.36
VCAN-201ENST00000265077 KIF6Q6ZMV9 814 aa6.58□□□□□ -1.36
VCAN-201ENST00000265077 PPP1R9BQ96SB3 815 aa6.58□□□□□ -1.36
VCAN-201ENST00000265077 STX1AQ16623 288 aa6.58□□□□□ -1.36
VCAN-201ENST00000265077 PHAXQ9H814 394 aaKnown RBP6.58□□□□□ -1.36
VCAN-201ENST00000265077 KIF5CO60282 957 aa6.58□□□□□ -1.36
VCAN-201ENST00000265077 MAP2K1Q02750 393 aaPredicted RBP6.58□□□□□ -1.36
VCAN-201ENST00000265077 TCHPQ9BT92 498 aa6.58□□□□□ -1.36
VCAN-201ENST00000265077 IRAK4Q9NWZ3 460 aa6.58□□□□□ -1.36
VCAN-201ENST00000265077 OTUD6BQ8N6M0 293 aa6.58□□□□□ -1.36
VCAN-201ENST00000265077 KIF1BPQ96EK5 621 aa6.58□□□□□ -1.36
VCAN-201ENST00000265077 NFE2L2Q16236 605 aa6.58□□□□□ -1.36
VCAN-201ENST00000265077 ANO10Q9NW15 660 aa6.58□□□□□ -1.36
VCAN-201ENST00000265077 SUFUQ9UMX1 484 aa6.58□□□□□ -1.36
VCAN-201ENST00000265077 CCDC69A6NI79 296 aa6.57□□□□□ -1.36
VCAN-201ENST00000265077 RLBP1P12271 317 aa6.57□□□□□ -1.36
VCAN-201ENST00000265077 BMP2KLQ5H9B9 411 aa6.57□□□□□ -1.36
VCAN-201ENST00000265077 MSL1Q68DK7 614 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms