RNA–Protein interactions for RNA: ENST00000264414.8

CUL3-201, Transcript of cullin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL3, Length 6,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-201ENST00000264414 ADAMTS2O95450 1211 aa17.15■□□□□ 0.34
CUL3-201ENST00000264414 TMEM110-MUSTN1A8MSY1 372 aa17.15■□□□□ 0.34
CUL3-201ENST00000264414 RRS1Q15050 365 aaKnown RBP17.15■□□□□ 0.34
CUL3-201ENST00000264414 NLRP5P59047 1200 aa17.14■□□□□ 0.34
CUL3-201ENST00000264414 VPS36Q86VN1 386 aa17.14■□□□□ 0.34
CUL3-201ENST00000264414 MIA2Q96PC5 1412 aa17.14■□□□□ 0.33
CUL3-201ENST00000264414 ATP2B3Q16720 1220 aa17.14■□□□□ 0.33
CUL3-201ENST00000264414 CCT2P78371 535 aaKnown RBP17.14■□□□□ 0.33
CUL3-201ENST00000264414 AKNAD1Q5T1N1 836 aa17.14■□□□□ 0.33
CUL3-201ENST00000264414 CCDC63Q8NA47 563 aa17.14■□□□□ 0.33
CUL3-201ENST00000264414 FAM212AQ96EL1 285 aa17.14■□□□□ 0.33
CUL3-201ENST00000264414 MTIF2P46199 727 aaKnown RBP17.14■□□□□ 0.33
CUL3-201ENST00000264414 CKAP2LQ8IYA6 745 aa17.14■□□□□ 0.33
CUL3-201ENST00000264414 BOLA2Q9H3K6 86 aa17.14■□□□□ 0.33
CUL3-201ENST00000264414 NDC80O14777 642 aa17.14■□□□□ 0.33
CUL3-201ENST00000264414 CAVIN4Q5BKX8 364 aa17.14■□□□□ 0.33
CUL3-201ENST00000264414 GIGYF2Q6Y7W6 1299 aaKnown RBP17.14■□□□□ 0.33
CUL3-201ENST00000264414 FANCIQ9NVI1 1328 aa17.13■□□□□ 0.33
CUL3-201ENST00000264414 WASF1Q92558 559 aa17.13■□□□□ 0.33
CUL3-201ENST00000264414 TOP1P11387 765 aaKnown RBP17.13■□□□□ 0.33
CUL3-201ENST00000264414 GTF2F1P35269 517 aaKnown RBP eCLIP17.13■□□□□ 0.33
CUL3-201ENST00000264414 PTPN14Q15678 1187 aa17.13■□□□□ 0.33
CUL3-201ENST00000264414 CFAP57Q96MR6 1250 aa17.13■□□□□ 0.33
CUL3-201ENST00000264414 IKBKGQ9Y6K9 419 aa17.12■□□□□ 0.33
CUL3-201ENST00000264414 IDEP14735 1019 aa17.12■□□□□ 0.33
CUL3-201ENST00000264414 MAP3K11Q16584 847 aa17.12■□□□□ 0.33
CUL3-201ENST00000264414 CCDC40Q4G0X9 1142 aa17.12■□□□□ 0.33
CUL3-201ENST00000264414 PROCA1Q8NCQ7 364 aaPredicted RBP17.12■□□□□ 0.33
CUL3-201ENST00000264414 PRDM11Q9NQV5 511 aa17.12■□□□□ 0.33
CUL3-201ENST00000264414 CTR9Q6PD62 1173 aa17.12■□□□□ 0.33
CUL3-201ENST00000264414 CNTLNQ9NXG0 1405 aa17.12■□□□□ 0.33
CUL3-201ENST00000264414 FBF1Q8TES7 1133 aa17.11■□□□□ 0.33
CUL3-201ENST00000264414 PRAM1Q96QH2 718 aa17.11■□□□□ 0.33
CUL3-201ENST00000264414 CTNNA3Q9UI47 895 aa17.11■□□□□ 0.33
CUL3-201ENST00000264414 PRPF40BQ6NWY9 871 aaKnown RBP17.11■□□□□ 0.33
CUL3-201ENST00000264414 CLEC11AQ9Y240 323 aa17.11■□□□□ 0.33
CUL3-201ENST00000264414 RPGRQ92834 1020 aaKnown RBP17.11■□□□□ 0.33
CUL3-201ENST00000264414 NAPBQ9H115 298 aa17.11■□□□□ 0.33
CUL3-201ENST00000264414 PAFAH1B1P43034 410 aa17.1■□□□□ 0.33
CUL3-201ENST00000264414 TPD52P55327 224 aaPredicted RBP17.1■□□□□ 0.33
CUL3-201ENST00000264414 JPH4Q96JJ6 628 aa17.1■□□□□ 0.33
CUL3-201ENST00000264414 C6orf229H3BNL8 230 aa17.1■□□□□ 0.33
CUL3-201ENST00000264414 TMEM266Q2M3C6 531 aa17.1■□□□□ 0.33
CUL3-201ENST00000264414 MYD88Q99836 296 aa17.1■□□□□ 0.33
CUL3-201ENST00000264414 HSP90AA4PQ58FG1 418 aa17.1■□□□□ 0.33
CUL3-201ENST00000264414 LRSAM1Q6UWE0 723 aa17.1■□□□□ 0.33
CUL3-201ENST00000264414 EXOC6BQ9Y2D4 811 aa17.1■□□□□ 0.33
CUL3-201ENST00000264414 MAP9Q49MG5 647 aa17.09■□□□□ 0.33
CUL3-201ENST00000264414 JADE2Q9NQC1 790 aa17.09■□□□□ 0.33
CUL3-201ENST00000264414 SFPQP23246 707 aaKnown RBP eCLIP17.09■□□□□ 0.33
CUL3-201ENST00000264414 ZNF622Q969S3 477 aaKnown RBP eCLIP17.09■□□□□ 0.334e-7■■□□□ 11.4
CUL3-201ENST00000264414 SIRT1Q96EB6 747 aa17.09■□□□□ 0.33
CUL3-201ENST00000264414 MPRIPQ6WCQ1 1025 aa17.09■□□□□ 0.33
CUL3-201ENST00000264414 CCT4P50991 539 aaKnown RBP17.09■□□□□ 0.33
CUL3-201ENST00000264414 GCC1Q96CN9 775 aa17.09■□□□□ 0.33
CUL3-201ENST00000264414 USO1O60763 962 aaKnown RBP17.08■□□□□ 0.33
CUL3-201ENST00000264414 CCDC6Q16204 474 aa17.08■□□□□ 0.33
CUL3-201ENST00000264414 USHBP1Q8N6Y0 703 aa17.08■□□□□ 0.32
CUL3-201ENST00000264414 SMIM23A6NLE4 172 aa17.08■□□□□ 0.32
CUL3-201ENST00000264414 CNNM3Q8NE01 707 aa17.08■□□□□ 0.32
CUL3-201ENST00000264414 TAOK3Q9H2K8 898 aa17.08■□□□□ 0.32
CUL3-201ENST00000264414 CLIP2Q9UDT6 1046 aa17.08■□□□□ 0.32
CUL3-201ENST00000264414 TTC36A6NLP5 189 aa17.08■□□□□ 0.32
CUL3-201ENST00000264414 SLC12A7Q9Y666 1083 aa17.08■□□□□ 0.32
CUL3-201ENST00000264414 SSRP1Q08945 709 aaKnown RBP17.07■□□□□ 0.32
CUL3-201ENST00000264414 GPTP24298 496 aa17.07■□□□□ 0.32
CUL3-201ENST00000264414 C16orf45Q96MC5 204 aaPredicted RBP17.07■□□□□ 0.32
CUL3-201ENST00000264414 F8W031 263 aaPredicted RBP17.07■□□□□ 0.32
CUL3-201ENST00000264414 FLIIQ13045 1269 aa17.07■□□□□ 0.32
CUL3-201ENST00000264414 PLS1Q14651 629 aa17.07■□□□□ 0.32
CUL3-201ENST00000264414 CGNQ9P2M7 1197 aaKnown RBP17.07■□□□□ 0.32
CUL3-201ENST00000264414 C6orf163Q5TEZ5 329 aa17.07■□□□□ 0.32
CUL3-201ENST00000264414 DAAM2Q86T65 1068 aa17.07■□□□□ 0.32
CUL3-201ENST00000264414 NAP1L3Q99457 506 aaPredicted RBP17.07■□□□□ 0.32
CUL3-201ENST00000264414 CCDC8Q9H0W5 538 aaPredicted RBP17.07■□□□□ 0.32
CUL3-201ENST00000264414 ATXN8OSP0DMR3 200 aa17.07■□□□□ 0.32
CUL3-201ENST00000264414 ACTN2P35609 894 aa17.07■□□□□ 0.32
CUL3-201ENST00000264414 CTCFLQ8NI51 663 aaPredicted RBP17.07■□□□□ 0.32
CUL3-201ENST00000264414 CCDC194A0A1B0GVG4 234 aa17.06■□□□□ 0.32
CUL3-201ENST00000264414 TMC6Q7Z403 805 aa17.06■□□□□ 0.32
CUL3-201ENST00000264414 CHD1LQ86WJ1 897 aa17.06■□□□□ 0.32
CUL3-201ENST00000264414 C8orf76Q96K31 380 aa17.06■□□□□ 0.32
CUL3-201ENST00000264414 ZNF287Q9HBT7 754 aa17.06■□□□□ 0.32
CUL3-201ENST00000264414 BAG4O95429 457 aaKnown RBP17.06■□□□□ 0.32
CUL3-201ENST00000264414 IFIT1P09914 478 aaKnown RBP17.06■□□□□ 0.32
CUL3-201ENST00000264414 CDK19Q9BWU1 502 aa17.05■□□□□ 0.32
CUL3-201ENST00000264414 GBP3Q9H0R5 595 aa17.05■□□□□ 0.32
CUL3-201ENST00000264414 PHACTR2O75167 634 aa17.05■□□□□ 0.32
CUL3-201ENST00000264414 PPP6R1Q9UPN7 881 aa17.05■□□□□ 0.32
CUL3-201ENST00000264414 ZSCAN12O43309 604 aa17.05■□□□□ 0.32
CUL3-201ENST00000264414 SMARCC1Q92922 1105 aaPredicted RBP17.05■□□□□ 0.32
CUL3-201ENST00000264414 ODF2LQ9ULJ1 636 aa17.05■□□□□ 0.32
CUL3-201ENST00000264414 MRVI1Q9Y6F6 885 aa17.05■□□□□ 0.32
CUL3-201ENST00000264414 IFIT3O14879 490 aaKnown RBP17.05■□□□□ 0.32
CUL3-201ENST00000264414 YEATS4O95619 227 aa17.05■□□□□ 0.32
CUL3-201ENST00000264414 PRDM2Q13029 1718 aa17.05■□□□□ 0.32
CUL3-201ENST00000264414 FERMT1Q9BQL6 677 aa17.04■□□□□ 0.32
CUL3-201ENST00000264414 GSTA5Q7RTV2 222 aa17.04■□□□□ 0.32
CUL3-201ENST00000264414 EHMT1Q9H9B1 1298 aa17.04■□□□□ 0.32
CUL3-201ENST00000264414 STARD3NLO95772 234 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms