RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 MARCH10Q8NA82 808 aaPredicted RBP29■■■□□ 2.23
SMARCB1-201ENST00000263121 PIGBQ92521 554 aa29■■■□□ 2.23
SMARCB1-201ENST00000263121 THSD7AQ9UPZ6 1657 aa29■■■□□ 2.23
SMARCB1-201ENST00000263121 CENPQQ7L2Z9 268 aaPredicted RBP28.99■■■□□ 2.23
SMARCB1-201ENST00000263121 PXDNLA1KZ92 1463 aa28.99■■■□□ 2.23
SMARCB1-201ENST00000263121 F6X3S4 739 aa28.98■■■□□ 2.23
SMARCB1-201ENST00000263121 ATRNO75882 1429 aa28.97■■■□□ 2.23
SMARCB1-201ENST00000263121 PDIA6Q15084 440 aa28.97■■■□□ 2.23
SMARCB1-201ENST00000263121 DDX21Q9NR30 783 aaKnown RBP eCLIP28.97■■■□□ 2.23
SMARCB1-201ENST00000263121 ANXA1P04083 346 aa28.96■■■□□ 2.23
SMARCB1-201ENST00000263121 PROSER3Q2NL68 480 aa28.96■■■□□ 2.23
SMARCB1-201ENST00000263121 USP16Q9Y5T5 823 aa28.96■■■□□ 2.23
SMARCB1-201ENST00000263121 CCT4P50991 539 aaKnown RBP28.96■■■□□ 2.23
SMARCB1-201ENST00000263121 HYPKQ9NX55 129 aa28.96■■■□□ 2.23
SMARCB1-201ENST00000263121 IGHDP01880 384 aa28.95■■■□□ 2.22
SMARCB1-201ENST00000263121 ATG3Q9NT62 314 aa28.94■■■□□ 2.22
SMARCB1-201ENST00000263121 GJD4Q96KN9 370 aaPredicted RBP28.93■■■□□ 2.22
SMARCB1-201ENST00000263121 ASAP1Q9ULH1 1129 aa28.93■■■□□ 2.22
SMARCB1-201ENST00000263121 SLC4A10Q6U841 1118 aa28.92■■■□□ 2.22
SMARCB1-201ENST00000263121 PTCD1O75127 700 aaKnown RBP28.91■■■□□ 2.22
SMARCB1-201ENST00000263121 PRIM1P49642 420 aaKnown RBP28.91■■■□□ 2.22
SMARCB1-201ENST00000263121 TRPC5Q9UL62 973 aaPredicted RBP28.91■■■□□ 2.22
SMARCB1-201ENST00000263121 ERBB4Q15303 1308 aa28.9■■■□□ 2.22
SMARCB1-201ENST00000263121 ADCY9O60503 1353 aa28.9■■■□□ 2.22
SMARCB1-201ENST00000263121 LRP10Q7Z4F1 713 aa28.89■■■□□ 2.22
SMARCB1-201ENST00000263121 VSIG10Q8N0Z9 540 aa28.89■■■□□ 2.21
SMARCB1-201ENST00000263121 SYTL4Q96C24 671 aaPredicted RBP28.88■■■□□ 2.21
SMARCB1-201ENST00000263121 RWDD1Q9H446 243 aaPredicted RBP28.88■■■□□ 2.21
SMARCB1-201ENST00000263121 PI4KAP2A4QPH2 592 aa28.87■■■□□ 2.21
SMARCB1-201ENST00000263121 HDAC1Q13547 482 aaPredicted RBP28.87■■■□□ 2.21
SMARCB1-201ENST00000263121 PI4KAP1Q8N8J0 262 aa28.87■■■□□ 2.21
SMARCB1-201ENST00000263121 DNAAF4Q8WXU2 420 aa28.86■■■□□ 2.21
SMARCB1-201ENST00000263121 ATP10DQ9P241 1426 aa28.86■■■□□ 2.21
SMARCB1-201ENST00000263121 ONECUT3O60422 494 aaPredicted RBP28.86■■■□□ 2.21
SMARCB1-201ENST00000263121 MYL6BP14649 208 aa28.85■■■□□ 2.21
SMARCB1-201ENST00000263121 KSR2Q6VAB6 950 aa28.85■■■□□ 2.21
SMARCB1-201ENST00000263121 MEIS3Q99687 375 aa28.85■■■□□ 2.21
SMARCB1-201ENST00000263121 ACSBG1Q96GR2 724 aa28.84■■■□□ 2.21
SMARCB1-201ENST00000263121 C1orf115Q9H7X2 142 aa28.84■■■□□ 2.21
SMARCB1-201ENST00000263121 A0A0G2JS52 829 aa28.83■■■□□ 2.21
SMARCB1-201ENST00000263121 MYT1Q01538 1121 aa28.83■■■□□ 2.21
SMARCB1-201ENST00000263121 TEX13AQ9BXU3 409 aaPredicted RBP28.83■■■□□ 2.21
SMARCB1-201ENST00000263121 KAT6BQ8WYB5 2073 aa28.83■■■□□ 2.21
SMARCB1-201ENST00000263121 DDX58O95786 925 aaKnown RBP28.83■■■□□ 2.21
SMARCB1-201ENST00000263121 NBPF26B4DH59 902 aa28.82■■■□□ 2.2
SMARCB1-201ENST00000263121 BEND3Q5T5X7 828 aa28.82■■■□□ 2.2
SMARCB1-201ENST00000263121 NBPF14Q5TI25 921 aa28.82■■■□□ 2.2
SMARCB1-201ENST00000263121 NBPF10Q6P3W6 841 aaKnown RBP28.82■■■□□ 2.2
SMARCB1-201ENST00000263121 NBPF15Q8N660 670 aa28.82■■■□□ 2.2
SMARCB1-201ENST00000263121 XAGE3Q8WTP9 111 aa28.82■■■□□ 2.2
SMARCB1-201ENST00000263121 MAP3K2Q9Y2U5 619 aa28.82■■■□□ 2.2
SMARCB1-201ENST00000263121 PIP4K2AP48426 406 aaPredicted RBP28.8■■■□□ 2.2
SMARCB1-201ENST00000263121 COPS6Q7L5N1 327 aa28.8■■■□□ 2.2
SMARCB1-201ENST00000263121 SLC4A9Q96Q91 983 aa28.8■■■□□ 2.2
SMARCB1-201ENST00000263121 RBM42Q9BTD8 480 aaKnown RBP28.8■■■□□ 2.2
SMARCB1-201ENST00000263121 SRCIN1Q9C0H9 1055 aa28.8■■■□□ 2.2
SMARCB1-201ENST00000263121 QTRT2Q9H974 415 aaKnown RBP28.8■■■□□ 2.2
SMARCB1-201ENST00000263121 TJP1Q07157 1748 aa28.8■■■□□ 2.2
SMARCB1-201ENST00000263121 AIMP1Q12904 312 aaKnown RBP28.8■■■□□ 2.2
SMARCB1-201ENST00000263121 DNAJC10Q8IXB1 793 aa28.8■■■□□ 2.2
SMARCB1-201ENST00000263121 A1BGP04217 495 aa28.78■■■□□ 2.2
SMARCB1-201ENST00000263121 CICQ96RK0 1608 aaPredicted RBP28.78■■■□□ 2.2
SMARCB1-201ENST00000263121 SIRT2Q8IXJ6 389 aa28.77■■■□□ 2.2
SMARCB1-201ENST00000263121 GNAI3P08754 354 aa28.77■■■□□ 2.2
SMARCB1-201ENST00000263121 USP44Q9H0E7 712 aa28.77■■■□□ 2.2
SMARCB1-201ENST00000263121 KCNQ2O43526 872 aa28.76■■■□□ 2.19
SMARCB1-201ENST00000263121 NHSQ6T4R5 1651 aa28.75■■■□□ 2.19
SMARCB1-201ENST00000263121 ALDH1L1O75891 902 aa28.75■■■□□ 2.19
SMARCB1-201ENST00000263121 ARFGEF2Q9Y6D5 1785 aa28.74■■■□□ 2.19
SMARCB1-201ENST00000263121 STARD3NLO95772 234 aa28.74■■■□□ 2.19
SMARCB1-201ENST00000263121 RIC3Q7Z5B4 369 aa28.74■■■□□ 2.19
SMARCB1-201ENST00000263121 RPAP2Q8IXW5 612 aaPredicted RBP28.74■■■□□ 2.19
SMARCB1-201ENST00000263121 SMC5Q8IY18 1101 aa28.74■■■□□ 2.19
SMARCB1-201ENST00000263121 SEPT12Q8IYM1 358 aa28.74■■■□□ 2.19
SMARCB1-201ENST00000263121 ANKRD44Q8N8A2 993 aa28.74■■■□□ 2.19
SMARCB1-201ENST00000263121 IBTKQ9P2D0 1353 aaPredicted RBP28.74■■■□□ 2.19
SMARCB1-201ENST00000263121 CEP85Q6P2H3 762 aa28.74■■■□□ 2.19
SMARCB1-201ENST00000263121 ANKRD13DQ6ZTN6 518 aa28.74■■■□□ 2.19
SMARCB1-201ENST00000263121 SKAP1Q86WV1 359 aa28.74■■■□□ 2.19
SMARCB1-201ENST00000263121 GNAI2P04899 355 aa28.73■■■□□ 2.19
SMARCB1-201ENST00000263121 LINS1Q8NG48 757 aa28.73■■■□□ 2.19
SMARCB1-201ENST00000263121 PALLDQ8WX93 1383 aa28.72■■■□□ 2.19
SMARCB1-201ENST00000263121 CYP19A1P11511 503 aaPredicted RBP28.72■■■□□ 2.19
SMARCB1-201ENST00000263121 SMARCC1Q92922 1105 aaPredicted RBP28.72■■■□□ 2.19
SMARCB1-201ENST00000263121 NUP188Q5SRE5 1749 aa28.72■■■□□ 2.19
SMARCB1-201ENST00000263121 METTL22Q9BUU2 404 aaPredicted RBP28.71■■■□□ 2.19
SMARCB1-201ENST00000263121 PLBD2Q8NHP8 589 aa28.7■■■□□ 2.19
SMARCB1-201ENST00000263121 ZNF831Q5JPB2 1677 aa28.7■■■□□ 2.19
SMARCB1-201ENST00000263121 UBTFL1P0CB47 393 aaPredicted RBP28.69■■■□□ 2.18
SMARCB1-201ENST00000263121 LOC102724428A0A0B4J2F2 783 aa28.68■■■□□ 2.18
SMARCB1-201ENST00000263121 SIK1P57059 783 aa28.68■■■□□ 2.18
SMARCB1-201ENST00000263121 ZNF772Q68DY9 489 aaPredicted RBP28.68■■■□□ 2.18
SMARCB1-201ENST00000263121 PDZRN3Q9UPQ7 1066 aa28.68■■■□□ 2.18
SMARCB1-201ENST00000263121 BTAF1O14981 1849 aa28.67■■■□□ 2.18
SMARCB1-201ENST00000263121 SBF2Q86WG5 1849 aa28.67■■■□□ 2.18
SMARCB1-201ENST00000263121 IGKV5-2P06315 115 aa28.67■■■□□ 2.18
SMARCB1-201ENST00000263121 CWF19L2Q2TBE0 894 aaKnown RBP28.67■■■□□ 2.18
SMARCB1-201ENST00000263121 TTLL7Q6ZT98 887 aa28.67■■■□□ 2.18
SMARCB1-201ENST00000263121 NEXNQ0ZGT2 675 aa28.67■■■□□ 2.18
SMARCB1-201ENST00000263121 GCC1Q96CN9 775 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms