RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 JCADQ9P266 1359 aa23.74■■□□□ 1.39
TRIM47-201ENST00000254816 PI4KAP2A4QPH2 592 aa23.73■■□□□ 1.39
TRIM47-201ENST00000254816 PDIA6Q15084 440 aa23.73■■□□□ 1.39
TRIM47-201ENST00000254816 PI4KAP1Q8N8J0 262 aa23.73■■□□□ 1.39
TRIM47-201ENST00000254816 LAMB4A4D0S4 1761 aa23.73■■□□□ 1.39
TRIM47-201ENST00000254816 SNRPA1P09661 255 aaKnown RBP23.73■■□□□ 1.39
TRIM47-201ENST00000254816 CCDC9Q9Y3X0 531 aaKnown RBP23.73■■□□□ 1.39
TRIM47-201ENST00000254816 PXDNLA1KZ92 1463 aa23.73■■□□□ 1.39
TRIM47-201ENST00000254816 EXOC5O00471 708 aa23.72■■□□□ 1.39
TRIM47-201ENST00000254816 ATP10DQ9P241 1426 aa23.72■■□□□ 1.39
TRIM47-201ENST00000254816 ADCY9O60503 1353 aa23.72■■□□□ 1.39
TRIM47-201ENST00000254816 MYL6BP14649 208 aa23.72■■□□□ 1.39
TRIM47-201ENST00000254816 PIP4K2AP48426 406 aaPredicted RBP23.72■■□□□ 1.39
TRIM47-201ENST00000254816 C8orf37Q96NL8 207 aa23.72■■□□□ 1.39
TRIM47-201ENST00000254816 DDX21Q9NR30 783 aaKnown RBP eCLIP23.71■■□□□ 1.39
TRIM47-201ENST00000254816 AIMP1Q12904 312 aaKnown RBP23.71■■□□□ 1.39
TRIM47-201ENST00000254816 HYPKQ9NX55 129 aa23.71■■□□□ 1.39
TRIM47-201ENST00000254816 KCPQ6ZWJ8 1503 aa23.7■■□□□ 1.39
TRIM47-201ENST00000254816 DNAAF4Q8WXU2 420 aa23.7■■□□□ 1.38
TRIM47-201ENST00000254816 TMOD3Q9NYL9 352 aa23.7■■□□□ 1.38
TRIM47-201ENST00000254816 PTCD1O75127 700 aaKnown RBP23.7■■□□□ 1.38
TRIM47-201ENST00000254816 CEP85Q6P2H3 762 aa23.7■■□□□ 1.38
TRIM47-201ENST00000254816 SPATA31A5Q5VU36 1347 aa23.69■■□□□ 1.38
TRIM47-201ENST00000254816 SPATA31A7Q8IWB4 1347 aa23.69■■□□□ 1.38
TRIM47-201ENST00000254816 ANKRD44Q8N8A2 993 aa23.68■■□□□ 1.38
TRIM47-201ENST00000254816 NGLY1Q96IV0 654 aa23.68■■□□□ 1.38
TRIM47-201ENST00000254816 TNS2Q63HR2 1409 aa23.68■■□□□ 1.38
TRIM47-201ENST00000254816 MAP3K2Q9Y2U5 619 aa23.68■■□□□ 1.38
TRIM47-201ENST00000254816 SRCIN1Q9C0H9 1055 aa23.67■■□□□ 1.38
TRIM47-201ENST00000254816 THRAP3Q9Y2W1 955 aaKnown RBP23.67■■□□□ 1.38
TRIM47-201ENST00000254816 BEND3Q5T5X7 828 aa23.67■■□□□ 1.38
TRIM47-201ENST00000254816 PIGBQ92521 554 aa23.67■■□□□ 1.38
TRIM47-201ENST00000254816 DOT1LQ8TEK3 1739 aa23.67■■□□□ 1.38
TRIM47-201ENST00000254816 LRP6O75581 1613 aa23.66■■□□□ 1.38
TRIM47-201ENST00000254816 RPAP2Q8IXW5 612 aaPredicted RBP23.66■■□□□ 1.38
TRIM47-201ENST00000254816 USP44Q9H0E7 712 aa23.66■■□□□ 1.38
TRIM47-201ENST00000254816 KSR2Q6VAB6 950 aa23.66■■□□□ 1.38
TRIM47-201ENST00000254816 UNC5CLQ8IV45 518 aa23.66■■□□□ 1.38
TRIM47-201ENST00000254816 ZBTB47Q9UFB7 747 aaPredicted RBP23.66■■□□□ 1.38
TRIM47-201ENST00000254816 GNAI2P04899 355 aa23.65■■□□□ 1.38
TRIM47-201ENST00000254816 NUCB1Q02818 461 aa23.65■■□□□ 1.38
TRIM47-201ENST00000254816 DDB1Q16531 1140 aa23.65■■□□□ 1.38
TRIM47-201ENST00000254816 GCC1Q96CN9 775 aa23.65■■□□□ 1.38
TRIM47-201ENST00000254816 ASAP1Q9ULH1 1129 aa23.65■■□□□ 1.38
TRIM47-201ENST00000254816 GNAI3P08754 354 aa23.64■■□□□ 1.38
TRIM47-201ENST00000254816 LNPKQ9C0E8 428 aa23.64■■□□□ 1.38
TRIM47-201ENST00000254816 HSPA1LP34931 641 aa23.64■■□□□ 1.37
TRIM47-201ENST00000254816 ANKRD45Q5TZF3 282 aa23.64■■□□□ 1.37
TRIM47-201ENST00000254816 XAGE3Q8WTP9 111 aa23.64■■□□□ 1.37
TRIM47-201ENST00000254816 CDCA7Q9BWT1 371 aaPredicted RBP23.64■■□□□ 1.37
TRIM47-201ENST00000254816 BCL9LQ86UU0 1499 aa23.64■■□□□ 1.37
TRIM47-201ENST00000254816 COPS6Q7L5N1 327 aa23.63■■□□□ 1.37
TRIM47-201ENST00000254816 SYTL4Q96C24 671 aaPredicted RBP23.63■■□□□ 1.37
TRIM47-201ENST00000254816 LRP10Q7Z4F1 713 aa23.63■■□□□ 1.37
TRIM47-201ENST00000254816 CHD1LQ86WJ1 897 aa23.62■■□□□ 1.37
TRIM47-201ENST00000254816 LRRFIP2Q9Y608 721 aaKnown RBP23.62■■□□□ 1.37
TRIM47-201ENST00000254816 DDX58O95786 925 aaKnown RBP23.61■■□□□ 1.37
TRIM47-201ENST00000254816 UBTFL1P0CB47 393 aaPredicted RBP23.61■■□□□ 1.37
TRIM47-201ENST00000254816 C8orf34Q49A92 452 aa23.61■■□□□ 1.37
TRIM47-201ENST00000254816 DCTPP1Q9H773 170 aa23.61■■□□□ 1.37
TRIM47-201ENST00000254816 ATG3Q9NT62 314 aa23.61■■□□□ 1.37
TRIM47-201ENST00000254816 CWF19L2Q2TBE0 894 aaKnown RBP23.61■■□□□ 1.37
TRIM47-201ENST00000254816 FAM161AQ3B820 660 aa23.61■■□□□ 1.37
TRIM47-201ENST00000254816 SPATA31A6Q5VVP1 1343 aa23.6■■□□□ 1.37
TRIM47-201ENST00000254816 NBPF7P0C2Y1 421 aaPredicted RBP23.6■■□□□ 1.37
TRIM47-201ENST00000254816 BARGINQ6ZT62 677 aa23.6■■□□□ 1.37
TRIM47-201ENST00000254816 RIC3Q7Z5B4 369 aa23.6■■□□□ 1.37
TRIM47-201ENST00000254816 NBPF26B4DH59 902 aa23.59■■□□□ 1.37
TRIM47-201ENST00000254816 FAM98CQ17RN3 349 aaKnown RBP23.59■■□□□ 1.37
TRIM47-201ENST00000254816 NBPF14Q5TI25 921 aa23.59■■□□□ 1.37
TRIM47-201ENST00000254816 NBPF10Q6P3W6 841 aaKnown RBP23.59■■□□□ 1.37
TRIM47-201ENST00000254816 NBPF15Q8N660 670 aa23.59■■□□□ 1.37
TRIM47-201ENST00000254816 BCL11AQ9H165 835 aa23.59■■□□□ 1.37
TRIM47-201ENST00000254816 BCL9O00512 1426 aa23.59■■□□□ 1.37
TRIM47-201ENST00000254816 ARFGEF2Q9Y6D5 1785 aa23.59■■□□□ 1.37
TRIM47-201ENST00000254816 A1BGP04217 495 aa23.59■■□□□ 1.37
TRIM47-201ENST00000254816 MARCH10Q8NA82 808 aaPredicted RBP23.59■■□□□ 1.37
TRIM47-201ENST00000254816 PRIM1P49642 420 aaKnown RBP23.58■■□□□ 1.37
TRIM47-201ENST00000254816 RBM42Q9BTD8 480 aaKnown RBP23.58■■□□□ 1.37
TRIM47-201ENST00000254816 A0A0G2JS52 829 aa23.58■■□□□ 1.36
TRIM47-201ENST00000254816 PNMA6EA0A0J9YXQ4 647 aa23.57■■□□□ 1.36
TRIM47-201ENST00000254816 NBR1Q14596 966 aa23.57■■□□□ 1.36
TRIM47-201ENST00000254816 VPS72Q15906 364 aa23.57■■□□□ 1.36
TRIM47-201ENST00000254816 FNBP4Q8N3X1 1017 aaPredicted RBP23.57■■□□□ 1.36
TRIM47-201ENST00000254816 ACSBG1Q96GR2 724 aa23.57■■□□□ 1.36
TRIM47-201ENST00000254816 AFDNP55196 1824 aaKnown RBP23.57■■□□□ 1.36
TRIM47-201ENST00000254816 APBB1O00213 710 aa23.57■■□□□ 1.36
TRIM47-201ENST00000254816 ANKRD13DQ6ZTN6 518 aa23.56■■□□□ 1.36
TRIM47-201ENST00000254816 USP21Q9UK80 565 aa23.56■■□□□ 1.36
TRIM47-201ENST00000254816 HMMRO75330 724 aa23.55■■□□□ 1.36
TRIM47-201ENST00000254816 ALDH1L1O75891 902 aa23.55■■□□□ 1.36
TRIM47-201ENST00000254816 ATP8B2P98198 1209 aa23.55■■□□□ 1.36
TRIM47-201ENST00000254816 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.55■■□□□ 1.36
TRIM47-201ENST00000254816 DNAJC10Q8IXB1 793 aa23.54■■□□□ 1.36
TRIM47-201ENST00000254816 LINS1Q8NG48 757 aa23.54■■□□□ 1.36
TRIM47-201ENST00000254816 MYD88Q99836 296 aa23.54■■□□□ 1.36
TRIM47-201ENST00000254816 IGKV5-2P06315 115 aa23.54■■□□□ 1.36
TRIM47-201ENST00000254816 MEX3CQ5U5Q3 659 aaKnown RBP23.54■■□□□ 1.36
TRIM47-201ENST00000254816 C9orf78Q9NZ63 289 aaPredicted RBP23.54■■□□□ 1.36
TRIM47-201ENST00000254816 ERBB4Q15303 1308 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms