RNA–Protein interactions for RNA: ENST00000252999.7

LAMA5-201, Transcript of laminin subunit alpha 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMA5, Length 11,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-201ENST00000252999 CEP83Q9Y592 693 aa13.16□□□□□ -0.3
LAMA5-201ENST00000252999 ZBTB16Q05516 673 aa13.16□□□□□ -0.3
LAMA5-201ENST00000252999 PUF60Q9UHX1 559 aaKnown RBP13.16□□□□□ -0.3
LAMA5-201ENST00000252999 KIF4AO95239 1232 aa13.16□□□□□ -0.3
LAMA5-201ENST00000252999 NBPF1Q3BBV0 1214 aa13.16□□□□□ -0.3
LAMA5-201ENST00000252999 RAB3IL1Q8TBN0 382 aa13.16□□□□□ -0.3
LAMA5-201ENST00000252999 AIDAQ96BJ3 306 aa13.16□□□□□ -0.3
LAMA5-201ENST00000252999 GUCY1B3Q02153 619 aa13.16□□□□□ -0.3
LAMA5-201ENST00000252999 NEMFO60524 1076 aa13.16□□□□□ -0.3
LAMA5-201ENST00000252999 ATRIPQ8WXE1 791 aa13.16□□□□□ -0.3
LAMA5-201ENST00000252999 ZBTB9Q96C00 473 aa13.16□□□□□ -0.3
LAMA5-201ENST00000252999 CCDC85AQ96PX6 553 aaPredicted RBP13.16□□□□□ -0.3
LAMA5-201ENST00000252999 STRN4Q9NRL3 753 aa13.16□□□□□ -0.3
LAMA5-201ENST00000252999 IVLP07476 585 aa13.15□□□□□ -0.3
LAMA5-201ENST00000252999 PSMC4P43686 418 aa13.15□□□□□ -0.3
LAMA5-201ENST00000252999 GNG11P61952 73 aa13.15□□□□□ -0.3
LAMA5-201ENST00000252999 CCDC155Q8N6L0 562 aa13.15□□□□□ -0.3
LAMA5-201ENST00000252999 IL1RAPL2Q9NP60 686 aa13.15□□□□□ -0.3
LAMA5-201ENST00000252999 PABPN1LA6NDY0 278 aaKnown RBP13.15□□□□□ -0.3
LAMA5-201ENST00000252999 NOL3O60936 208 aaKnown RBP13.15□□□□□ -0.3
LAMA5-201ENST00000252999 PLEKHO1Q53GL0 409 aaPredicted RBP13.15□□□□□ -0.3
LAMA5-201ENST00000252999 WIZO95785 1651 aa13.15□□□□□ -0.3
LAMA5-201ENST00000252999 PHAXQ9H814 394 aaKnown RBP13.15□□□□□ -0.3
LAMA5-201ENST00000252999 PRPF40BQ6NWY9 871 aaKnown RBP13.15□□□□□ -0.3
LAMA5-201ENST00000252999 TTC31Q49AM3 519 aaPredicted RBP13.15□□□□□ -0.3
LAMA5-201ENST00000252999 IQCGQ9H095 443 aaKnown RBP13.15□□□□□ -0.3
LAMA5-201ENST00000252999 CCDC121Q6ZUS5 278 aa13.15□□□□□ -0.31
LAMA5-201ENST00000252999 CTAGE5O15320 804 aa13.14□□□□□ -0.31
LAMA5-201ENST00000252999 NUTM1Q86Y26 1132 aa13.14□□□□□ -0.31
LAMA5-201ENST00000252999 ANAPC4Q9UJX5 808 aa13.14□□□□□ -0.31
LAMA5-201ENST00000252999 RAPGEF2Q9Y4G8 1499 aa13.14□□□□□ -0.31
LAMA5-201ENST00000252999 SSFA2P28290 1259 aa13.14□□□□□ -0.31
LAMA5-201ENST00000252999 ARFGAP3Q9NP61 516 aa13.14□□□□□ -0.31
LAMA5-201ENST00000252999 CNNM3Q8NE01 707 aa13.14□□□□□ -0.31
LAMA5-201ENST00000252999 PPP2R1AP30153 589 aa13.14□□□□□ -0.31
LAMA5-201ENST00000252999 PDIA4P13667 645 aaKnown RBP13.14□□□□□ -0.31
LAMA5-201ENST00000252999 GOLGA8BA8MQT2 603 aa13.13□□□□□ -0.31
LAMA5-201ENST00000252999 MRPS9P82933 396 aaKnown RBP13.13□□□□□ -0.31
LAMA5-201ENST00000252999 CCDC40Q4G0X9 1142 aa13.13□□□□□ -0.31
LAMA5-201ENST00000252999 CCDC171Q6TFL3 1326 aa13.13□□□□□ -0.31
LAMA5-201ENST00000252999 TCERG1LQ5VWI1 586 aa13.13□□□□□ -0.31
LAMA5-201ENST00000252999 TDRD9Q8NDG6 1382 aaKnown RBP13.13□□□□□ -0.31
LAMA5-201ENST00000252999 TMEM266Q2M3C6 531 aa13.13□□□□□ -0.31
LAMA5-201ENST00000252999 CETN1Q12798 172 aa13.13□□□□□ -0.31
LAMA5-201ENST00000252999 ATF7IPQ6VMQ6 1270 aa13.13□□□□□ -0.31
LAMA5-201ENST00000252999 CCDC82Q8N4S0 544 aa13.13□□□□□ -0.31
LAMA5-201ENST00000252999 RPUSD2Q8IZ73 545 aaKnown RBP13.13□□□□□ -0.31
LAMA5-201ENST00000252999 MICALL1Q8N3F8 863 aa13.13□□□□□ -0.31
LAMA5-201ENST00000252999 MIPOL1Q8TD10 442 aa13.13□□□□□ -0.31
LAMA5-201ENST00000252999 SH2B1Q9NRF2 756 aaPredicted RBP13.13□□□□□ -0.31
LAMA5-201ENST00000252999 SSX2IPQ9Y2D8 614 aa13.13□□□□□ -0.31
LAMA5-201ENST00000252999 MINDY4BA8MYZ0 360 aa13.12□□□□□ -0.31
LAMA5-201ENST00000252999 ACTN2P35609 894 aa13.12□□□□□ -0.31
LAMA5-201ENST00000252999 CKAP4Q07065 602 aaKnown RBP13.12□□□□□ -0.31
LAMA5-201ENST00000252999 GOLGA6L9A6NEM1 432 aa13.12□□□□□ -0.31
LAMA5-201ENST00000252999 NAA25Q14CX7 972 aa13.12□□□□□ -0.31
LAMA5-201ENST00000252999 EHBP1Q8NDI1 1231 aa13.12□□□□□ -0.31
LAMA5-201ENST00000252999 GDPD2Q9HCC8 539 aa13.12□□□□□ -0.31
LAMA5-201ENST00000252999 CPSF2Q9P2I0 782 aaKnown RBP13.12□□□□□ -0.31
LAMA5-201ENST00000252999 RBM27Q9P2N5 1060 aaKnown RBP13.12□□□□□ -0.31
LAMA5-201ENST00000252999 SMC6Q96SB8 1091 aa13.12□□□□□ -0.31
LAMA5-201ENST00000252999 PLEKHH1Q9ULM0 1364 aa13.12□□□□□ -0.31
LAMA5-201ENST00000252999 ISM2Q6H9L7 571 aa13.11□□□□□ -0.31
LAMA5-201ENST00000252999 TNPO1Q92973 898 aaKnown RBP13.11□□□□□ -0.31
LAMA5-201ENST00000252999 CEP126Q9P2H0 1117 aa13.11□□□□□ -0.31
LAMA5-201ENST00000252999 CUX1P39880 1505 aa13.11□□□□□ -0.31
LAMA5-201ENST00000252999 DDX46Q7L014 1031 aaKnown RBP13.11□□□□□ -0.31
LAMA5-201ENST00000252999 PAXBP1Q9Y5B6 917 aa13.11□□□□□ -0.31
LAMA5-201ENST00000252999 SMARCA5O60264 1052 aaPredicted RBP13.11□□□□□ -0.31
LAMA5-201ENST00000252999 RAB34Q9BZG1 259 aa13.11□□□□□ -0.31
LAMA5-201ENST00000252999 TPD52P55327 224 aaPredicted RBP13.11□□□□□ -0.31
LAMA5-201ENST00000252999 TMEM132EQ6IEE7 984 aa13.11□□□□□ -0.31
LAMA5-201ENST00000252999 UBE2Q2Q8WVN8 375 aa13.11□□□□□ -0.31
LAMA5-201ENST00000252999 CABP4P57796 275 aa13.11□□□□□ -0.31
LAMA5-201ENST00000252999 PRC1O43663 620 aa13.11□□□□□ -0.31
LAMA5-201ENST00000252999 KIAA0753Q2KHM9 967 aa13.11□□□□□ -0.31
LAMA5-201ENST00000252999 OTUD6BQ8N6M0 293 aa13.11□□□□□ -0.31
LAMA5-201ENST00000252999 SYNCQ9H7C4 482 aa13.11□□□□□ -0.31
LAMA5-201ENST00000252999 ZNF530Q6P9A1 599 aaPredicted RBP13.11□□□□□ -0.31
LAMA5-201ENST00000252999 ABCF2Q9UG63 623 aa13.11□□□□□ -0.31
LAMA5-201ENST00000252999 EXOC6BQ9Y2D4 811 aa13.1□□□□□ -0.31
LAMA5-201ENST00000252999 FAM114A1Q8IWE2 563 aa13.1□□□□□ -0.31
LAMA5-201ENST00000252999 GPRASP1Q5JY77 1395 aa13.1□□□□□ -0.31
LAMA5-201ENST00000252999 RASAL2Q9UJF2 1139 aa13.1□□□□□ -0.31
LAMA5-201ENST00000252999 DNAJC21Q5F1R6 531 aaKnown RBP13.1□□□□□ -0.31
LAMA5-201ENST00000252999 SULT6B1Q6IMI4 303 aa13.1□□□□□ -0.31
LAMA5-201ENST00000252999 MYCNP04198 464 aaPredicted RBP13.1□□□□□ -0.31
LAMA5-201ENST00000252999 KIF3CO14782 793 aa13.1□□□□□ -0.31
LAMA5-201ENST00000252999 MCM5P33992 734 aa13.1□□□□□ -0.31
LAMA5-201ENST00000252999 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.1□□□□□ -0.312e-7■□□□□ 10.8
LAMA5-201ENST00000252999 V9GYY5 206 aaPredicted RBP13.1□□□□□ -0.31
LAMA5-201ENST00000252999 CCT2P78371 535 aaKnown RBP13.1□□□□□ -0.31
LAMA5-201ENST00000252999 POLR3DP05423 398 aaPredicted RBP13.09□□□□□ -0.31
LAMA5-201ENST00000252999 CAPN2P17655 700 aa13.09□□□□□ -0.31
LAMA5-201ENST00000252999 SYCP3Q8IZU3 236 aa13.09□□□□□ -0.31
LAMA5-201ENST00000252999 SELENOSQ9BQE4 189 aa13.09□□□□□ -0.31
LAMA5-201ENST00000252999 FERMT1Q9BQL6 677 aa13.09□□□□□ -0.31
LAMA5-201ENST00000252999 MAP7D1Q3KQU3 841 aa13.09□□□□□ -0.31
LAMA5-201ENST00000252999 PRIMPOLQ96LW4 560 aa13.09□□□□□ -0.31
LAMA5-201ENST00000252999 ZNF830Q96NB3 372 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms