RNA–Protein interactions for RNA: ENST00000250113.11

FXR2-201, Transcript of FMR1 autosomal homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXR2, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR2-201ENST00000250113 CHMP5Q9NZZ3 219 aa23.99■■□□□ 1.43
FXR2-201ENST00000250113 SSH3Q8TE77 659 aa23.98■■□□□ 1.43
FXR2-201ENST00000250113 LMO7Q8WWI1 1683 aa23.97■■□□□ 1.43
FXR2-201ENST00000250113 ZNF790Q6PG37 636 aa23.97■■□□□ 1.43
FXR2-201ENST00000250113 NCAPD2Q15021 1401 aa23.97■■□□□ 1.43
FXR2-201ENST00000250113 PHKG2P15735 406 aa23.97■■□□□ 1.43
FXR2-201ENST00000250113 C9orf78Q9NZ63 289 aaPredicted RBP23.97■■□□□ 1.43
FXR2-201ENST00000250113 UNC5CLQ8IV45 518 aa23.97■■□□□ 1.43
FXR2-201ENST00000250113 OSBPL3Q9H4L5 887 aa23.97■■□□□ 1.43
FXR2-201ENST00000250113 TRAK2O60296 914 aa23.96■■□□□ 1.43
FXR2-201ENST00000250113 KDM3BQ7LBC6 1761 aa23.96■■□□□ 1.43
FXR2-201ENST00000250113 CACNA1FO60840 1977 aa23.96■■□□□ 1.43
FXR2-201ENST00000250113 KIF1AQ12756 1690 aa23.95■■□□□ 1.43
FXR2-201ENST00000250113 SLC52A2Q9HAB3 445 aa23.95■■□□□ 1.43
FXR2-201ENST00000250113 SPG7Q9UQ90 795 aa23.95■■□□□ 1.43
FXR2-201ENST00000250113 SALL3Q9BXA9 1300 aa23.95■■□□□ 1.42
FXR2-201ENST00000250113 MEGF6O75095 1541 aa23.95■■□□□ 1.42
FXR2-201ENST00000250113 CYP27B1O15528 508 aa23.94■■□□□ 1.42
FXR2-201ENST00000250113 BRINP3Q76B58 766 aa23.94■■□□□ 1.42
FXR2-201ENST00000250113 SPATA31A3Q5VYP0 1347 aa23.94■■□□□ 1.42
FXR2-201ENST00000250113 K7ELQ4 463 aaPredicted RBP23.94■■□□□ 1.42
FXR2-201ENST00000250113 KSR2Q6VAB6 950 aa23.94■■□□□ 1.42
FXR2-201ENST00000250113 ALS2Q96Q42 1657 aa23.94■■□□□ 1.42
FXR2-201ENST00000250113 RHPN1Q8TCX5 695 aa23.93■■□□□ 1.42
FXR2-201ENST00000250113 TNPO1Q92973 898 aaKnown RBP23.93■■□□□ 1.42
FXR2-201ENST00000250113 ZNF496Q96IT1 587 aaPredicted RBP23.93■■□□□ 1.42
FXR2-201ENST00000250113 PXDNLA1KZ92 1463 aa23.93■■□□□ 1.42
FXR2-201ENST00000250113 ERC2O15083 957 aa23.93■■□□□ 1.42
FXR2-201ENST00000250113 CHMP4AQ9BY43 222 aa23.93■■□□□ 1.42
FXR2-201ENST00000250113 OS9Q13438 667 aaPredicted RBP23.92■■□□□ 1.42
FXR2-201ENST00000250113 IFNL2Q8IZJ0 200 aa23.92■■□□□ 1.42
FXR2-201ENST00000250113 PA2G4Q9UQ80 394 aaKnown RBP23.92■■□□□ 1.42
FXR2-201ENST00000250113 KDM6AO15550 1401 aaPredicted RBP23.92■■□□□ 1.42
FXR2-201ENST00000250113 POLA2Q14181 598 aa23.92■■□□□ 1.42
FXR2-201ENST00000250113 XRCC6P12956 609 aaKnown RBP eCLIP23.91■■□□□ 1.42
FXR2-201ENST00000250113 PDIA6Q15084 440 aa23.91■■□□□ 1.42
FXR2-201ENST00000250113 TNS3Q68CZ2 1445 aa23.91■■□□□ 1.42
FXR2-201ENST00000250113 USP16Q9Y5T5 823 aa23.91■■□□□ 1.42
FXR2-201ENST00000250113 HEG1Q9ULI3 1381 aa23.91■■□□□ 1.42
FXR2-201ENST00000250113 HYPKQ9NX55 129 aa23.91■■□□□ 1.42
FXR2-201ENST00000250113 ZNF335Q9H4Z2 1342 aaPredicted RBP23.9■■□□□ 1.42
FXR2-201ENST00000250113 JARID2Q92833 1246 aaPredicted RBP23.9■■□□□ 1.42
FXR2-201ENST00000250113 CHAMP1Q96JM3 812 aa23.9■■□□□ 1.42
FXR2-201ENST00000250113 REC8O95072 547 aa23.9■■□□□ 1.42
FXR2-201ENST00000250113 RIC3Q7Z5B4 369 aa23.9■■□□□ 1.42
FXR2-201ENST00000250113 PRDM11Q9NQV5 511 aa23.9■■□□□ 1.42
FXR2-201ENST00000250113 DDX21Q9NR30 783 aaKnown RBP eCLIP23.9■■□□□ 1.42
FXR2-201ENST00000250113 AK9Q5TCS8 1911 aa23.89■■□□□ 1.41
FXR2-201ENST00000250113 SSFA2P28290 1259 aa23.88■■□□□ 1.41
FXR2-201ENST00000250113 DDIT3P35638 169 aa23.88■■□□□ 1.41
FXR2-201ENST00000250113 RABEP1Q15276 862 aa23.88■■□□□ 1.41
FXR2-201ENST00000250113 COPS6Q7L5N1 327 aa23.88■■□□□ 1.41
FXR2-201ENST00000250113 XAGE3Q8WTP9 111 aa23.88■■□□□ 1.41
FXR2-201ENST00000250113 TOM1L2Q6ZVM7 507 aa23.87■■□□□ 1.41
FXR2-201ENST00000250113 TTC5Q8N0Z6 440 aa23.87■■□□□ 1.41
FXR2-201ENST00000250113 ANO2Q9NQ90 1003 aa23.87■■□□□ 1.41
FXR2-201ENST00000250113 CHMLP26374 656 aa23.87■■□□□ 1.41
FXR2-201ENST00000250113 ESYT1Q9BSJ8 1104 aa23.87■■□□□ 1.41
FXR2-201ENST00000250113 DCCP43146 1447 aa23.87■■□□□ 1.41
FXR2-201ENST00000250113 GOLGA6L3A6NEY3 463 aa23.86■■□□□ 1.41
FXR2-201ENST00000250113 IL25Q9H293 177 aa23.86■■□□□ 1.41
FXR2-201ENST00000250113 SLAIN2Q9P270 581 aa23.86■■□□□ 1.41
FXR2-201ENST00000250113 STAP2Q9UGK3 403 aa23.86■■□□□ 1.41
FXR2-201ENST00000250113 FOXD4L5Q5VV16 416 aaPredicted RBP23.86■■□□□ 1.41
FXR2-201ENST00000250113 FOXD4L4Q8WXT5 416 aaPredicted RBP23.86■■□□□ 1.41
FXR2-201ENST00000250113 KIF1BPQ96EK5 621 aa23.86■■□□□ 1.41
FXR2-201ENST00000250113 NCOA3Q9Y6Q9 1424 aa23.86■■□□□ 1.41
FXR2-201ENST00000250113 EIF5BO60841 1220 aaKnown RBP23.85■■□□□ 1.41
FXR2-201ENST00000250113 RAB11FIP3O75154 756 aa23.85■■□□□ 1.41
FXR2-201ENST00000250113 CABP4P57796 275 aa23.85■■□□□ 1.41
FXR2-201ENST00000250113 SUCLG2Q96I99 432 aa23.85■■□□□ 1.41
FXR2-201ENST00000250113 RRAGDQ9NQL2 400 aaPredicted RBP23.85■■□□□ 1.41
FXR2-201ENST00000250113 DDX58O95786 925 aaKnown RBP23.85■■□□□ 1.41
FXR2-201ENST00000250113 PKP1Q13835 747 aa23.85■■□□□ 1.41
FXR2-201ENST00000250113 DCAF5Q96JK2 942 aa23.85■■□□□ 1.41
FXR2-201ENST00000250113 STRN4Q9NRL3 753 aa23.85■■□□□ 1.41
FXR2-201ENST00000250113 NOL8Q76FK4 1167 aaKnown RBP23.84■■□□□ 1.41
FXR2-201ENST00000250113 OVOS2A0A0G2JMS6 1433 aa23.84■■□□□ 1.41
FXR2-201ENST00000250113 IGKV5-2P06315 115 aa23.84■■□□□ 1.41
FXR2-201ENST00000250113 LINS1Q8NG48 757 aa23.84■■□□□ 1.41
FXR2-201ENST00000250113 BICC1Q9H694 974 aaKnown RBP23.84■■□□□ 1.41
FXR2-201ENST00000250113 GRM8O00222 908 aa23.83■■□□□ 1.41
FXR2-201ENST00000250113 ALDH1L1O75891 902 aa23.83■■□□□ 1.41
FXR2-201ENST00000250113 KLHDC4Q8TBB5 520 aa23.83■■□□□ 1.41
FXR2-201ENST00000250113 KAZALD1Q96I82 304 aa23.83■■□□□ 1.41
FXR2-201ENST00000250113 MYD88Q99836 296 aa23.83■■□□□ 1.41
FXR2-201ENST00000250113 CAMTA1Q9Y6Y1 1673 aa23.83■■□□□ 1.41
FXR2-201ENST00000250113 SIL1Q9H173 461 aa23.83■■□□□ 1.41
FXR2-201ENST00000250113 PALD1Q9ULE6 856 aa23.83■■□□□ 1.41
FXR2-201ENST00000250113 PI4K2BQ8TCG2 481 aa23.82■■□□□ 1.4
FXR2-201ENST00000250113 DDX54Q8TDD1 881 aaKnown RBP23.82■■□□□ 1.4
FXR2-201ENST00000250113 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.82■■□□□ 1.4
FXR2-201ENST00000250113 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.82■■□□□ 1.4
FXR2-201ENST00000250113 KDM4FA0A1W2PPD8 638 aa23.81■■□□□ 1.4
FXR2-201ENST00000250113 SNRPA1P09661 255 aaKnown RBP23.8■■□□□ 1.4
FXR2-201ENST00000250113 COL18A1P39060 1754 aa23.8■■□□□ 1.4
FXR2-201ENST00000250113 NEK4P51957 841 aa23.8■■□□□ 1.4
FXR2-201ENST00000250113 GAS2L3Q86XJ1 694 aa23.8■■□□□ 1.4
FXR2-201ENST00000250113 ATP5J2-PTCD1G3V325 749 aa23.79■■□□□ 1.4
FXR2-201ENST00000250113 PTCD1O75127 700 aaKnown RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms