RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 RAB34Q9BZG1 259 aa11.86□□□□□ -0.51
SLF2-201ENST00000238961 BIN2Q9UBW5 565 aaPredicted RBP11.86□□□□□ -0.51
SLF2-201ENST00000238961 CLEC11AQ9Y240 323 aa11.86□□□□□ -0.51
SLF2-201ENST00000238961 APAF1O14727 1248 aa11.86□□□□□ -0.51
SLF2-201ENST00000238961 MYL6BP14649 208 aa11.86□□□□□ -0.51
SLF2-201ENST00000238961 CCDC174Q6PII3 467 aa11.86□□□□□ -0.51
SLF2-201ENST00000238961 BANK1Q8NDB2 785 aa11.86□□□□□ -0.51
SLF2-201ENST00000238961 MIPOL1Q8TD10 442 aa11.86□□□□□ -0.51
SLF2-201ENST00000238961 PKNOX2Q96KN3 472 aa11.86□□□□□ -0.51
SLF2-201ENST00000238961 NUP88Q99567 741 aaPredicted RBP11.86□□□□□ -0.51
SLF2-201ENST00000238961 FGD5Q6ZNL6 1462 aa11.86□□□□□ -0.51
SLF2-201ENST00000238961 NLRP5P59047 1200 aa11.86□□□□□ -0.51
SLF2-201ENST00000238961 TOM1L2Q6ZVM7 507 aa11.86□□□□□ -0.51
SLF2-201ENST00000238961 MCM2P49736 904 aa11.86□□□□□ -0.51
SLF2-201ENST00000238961 NAA25Q14CX7 972 aa11.86□□□□□ -0.51
SLF2-201ENST00000238961 TERF1P54274 439 aa11.86□□□□□ -0.51
SLF2-201ENST00000238961 CEP112Q8N8E3 955 aa11.86□□□□□ -0.51
SLF2-201ENST00000238961 TRERF1Q96PN7 1200 aa11.86□□□□□ -0.51
SLF2-201ENST00000238961 ANKIB1Q9P2G1 1089 aa11.86□□□□□ -0.51
SLF2-201ENST00000238961 TRAK2O60296 914 aa11.85□□□□□ -0.51
SLF2-201ENST00000238961 BAG4O95429 457 aaKnown RBP11.85□□□□□ -0.51
SLF2-201ENST00000238961 POLR3GO15318 223 aaPredicted RBP11.85□□□□□ -0.51
SLF2-201ENST00000238961 CTR9Q6PD62 1173 aa11.85□□□□□ -0.51
SLF2-201ENST00000238961 TTC21AQ8NDW8 1320 aa11.85□□□□□ -0.51
SLF2-201ENST00000238961 MINDY4BA8MYZ0 360 aa11.85□□□□□ -0.51
SLF2-201ENST00000238961 IDH1O75874 414 aaKnown RBP11.85□□□□□ -0.51
SLF2-201ENST00000238961 GNAI3P08754 354 aa11.85□□□□□ -0.51
SLF2-201ENST00000238961 CCDC155Q8N6L0 562 aa11.85□□□□□ -0.51
SLF2-201ENST00000238961 DDX12PQ92771 950 aa11.85□□□□□ -0.51
SLF2-201ENST00000238961 CIZ1Q9ULV3 898 aaPredicted RBP11.85□□□□□ -0.51
SLF2-201ENST00000238961 STX6O43752 255 aa11.85□□□□□ -0.51
SLF2-201ENST00000238961 TATP17735 454 aaPredicted RBP11.85□□□□□ -0.51
SLF2-201ENST00000238961 PLEKHO1Q53GL0 409 aaPredicted RBP11.85□□□□□ -0.51
SLF2-201ENST00000238961 ZBTB24O43167 697 aaPredicted RBP11.85□□□□□ -0.51
SLF2-201ENST00000238961 PHACTR2O75167 634 aa11.85□□□□□ -0.51
SLF2-201ENST00000238961 WDR66Q8TBY9 1149 aa11.85□□□□□ -0.51
SLF2-201ENST00000238961 PRKCSHP14314 528 aaPredicted RBP11.84□□□□□ -0.51
SLF2-201ENST00000238961 CCDC82Q8N4S0 544 aa11.84□□□□□ -0.51
SLF2-201ENST00000238961 TXNDC16Q9P2K2 825 aa11.84□□□□□ -0.51
SLF2-201ENST00000238961 CEP83Q9Y592 693 aa11.84□□□□□ -0.51
SLF2-201ENST00000238961 KIAA0753Q2KHM9 967 aa11.84□□□□□ -0.51
SLF2-201ENST00000238961 AIDAQ96BJ3 306 aa11.84□□□□□ -0.51
SLF2-201ENST00000238961 PPME1Q9Y570 386 aa11.84□□□□□ -0.51
SLF2-201ENST00000238961 KIF15Q9NS87 1388 aa11.84□□□□□ -0.51
SLF2-201ENST00000238961 NLRP6P59044 892 aa11.84□□□□□ -0.51
SLF2-201ENST00000238961 TACC3Q9Y6A5 838 aa11.84□□□□□ -0.51
SLF2-201ENST00000238961 RRP1P56182 461 aaKnown RBP11.84□□□□□ -0.51
SLF2-201ENST00000238961 SEPT14Q6ZU15 432 aa11.84□□□□□ -0.51
SLF2-201ENST00000238961 ZNF444Q8N0Y2 327 aaPredicted RBP11.84□□□□□ -0.51
SLF2-201ENST00000238961 GBP7Q8N8V2 638 aaPredicted RBP11.84□□□□□ -0.51
SLF2-201ENST00000238961 CFAP157Q5JU67 520 aa11.83□□□□□ -0.52
SLF2-201ENST00000238961 URI1O94763 535 aaPredicted RBP11.83□□□□□ -0.52
SLF2-201ENST00000238961 CCDC40Q4G0X9 1142 aa11.83□□□□□ -0.52
SLF2-201ENST00000238961 STXBP4Q6ZWJ1 553 aa11.83□□□□□ -0.52
SLF2-201ENST00000238961 SMARCC1Q92922 1105 aaPredicted RBP11.83□□□□□ -0.52
SLF2-201ENST00000238961 MPHOSPH9Q99550 1183 aa11.83□□□□□ -0.52
SLF2-201ENST00000238961 ESCO1Q5FWF5 840 aa11.83□□□□□ -0.52
SLF2-201ENST00000238961 ABTB2Q8N961 1025 aa11.83□□□□□ -0.52
SLF2-201ENST00000238961 PROCA1Q8NCQ7 364 aaPredicted RBP11.83□□□□□ -0.52
SLF2-201ENST00000238961 CCDC85AQ96PX6 553 aaPredicted RBP11.83□□□□□ -0.52
SLF2-201ENST00000238961 NCAPGQ9BPX3 1015 aa11.83□□□□□ -0.52
SLF2-201ENST00000238961 CTNNA3Q9UI47 895 aa11.83□□□□□ -0.52
SLF2-201ENST00000238961 MYBBP1AQ9BQG0 1328 aaKnown RBP11.83□□□□□ -0.52
SLF2-201ENST00000238961 GJC1P36383 396 aa11.83□□□□□ -0.52
SLF2-201ENST00000238961 CGNQ9P2M7 1197 aaKnown RBP11.83□□□□□ -0.52
SLF2-201ENST00000238961 ZSCAN12O43309 604 aa11.82□□□□□ -0.52
SLF2-201ENST00000238961 GSTA5Q7RTV2 222 aa11.82□□□□□ -0.52
SLF2-201ENST00000238961 KIAA1524Q8TCG1 905 aa11.82□□□□□ -0.52
SLF2-201ENST00000238961 CPLX3Q8WVH0 158 aa11.82□□□□□ -0.52
SLF2-201ENST00000238961 MTIF2P46199 727 aaKnown RBP11.82□□□□□ -0.52
SLF2-201ENST00000238961 EP400NLQ6ZTU2 488 aa11.82□□□□□ -0.52
SLF2-201ENST00000238961 FAM169AQ9Y6X4 670 aa11.82□□□□□ -0.52
SLF2-201ENST00000238961 GAS8O95995 478 aa11.82□□□□□ -0.52
SLF2-201ENST00000238961 DNAJC5BQ9UF47 199 aa11.82□□□□□ -0.52
SLF2-201ENST00000238961 NUP62CLQ9H1M0 184 aa11.82□□□□□ -0.52
SLF2-201ENST00000238961 ZPR1O75312 459 aa11.82□□□□□ -0.52
SLF2-201ENST00000238961 NCBP1Q09161 790 aaKnown RBP11.82□□□□□ -0.52
SLF2-201ENST00000238961 SARNPP82979 210 aaKnown RBP11.82□□□□□ -0.52
SLF2-201ENST00000238961 SYNJ1O43426 1573 aa11.82□□□□□ -0.52
SLF2-201ENST00000238961 GPRASP1Q5JY77 1395 aa11.81□□□□□ -0.52
SLF2-201ENST00000238961 MYO1BO43795 1136 aa11.81□□□□□ -0.52
SLF2-201ENST00000238961 HSPA4P34932 840 aa11.81□□□□□ -0.52
SLF2-201ENST00000238961 ZFP91Q96JP5 570 aaPredicted RBP11.81□□□□□ -0.52
SLF2-201ENST00000238961 ANKRD30AQ9BXX3 1397 aa11.81□□□□□ -0.52
SLF2-201ENST00000238961 SMG6Q86US8 1419 aaKnown RBP11.81□□□□□ -0.52
SLF2-201ENST00000238961 SETD5Q9C0A6 1442 aa11.81□□□□□ -0.52
SLF2-201ENST00000238961 CKAP4Q07065 602 aaKnown RBP11.81□□□□□ -0.52
SLF2-201ENST00000238961 WDR46O15213 610 aaKnown RBP11.81□□□□□ -0.52
SLF2-201ENST00000238961 MRC2Q9UBG0 1479 aa11.81□□□□□ -0.52
SLF2-201ENST00000238961 CCDC18Q5T9S5 1454 aa11.81□□□□□ -0.52
SLF2-201ENST00000238961 CAVIN4Q5BKX8 364 aa11.81□□□□□ -0.52
SLF2-201ENST00000238961 KMT5BQ4FZB7 885 aa11.81□□□□□ -0.52
SLF2-201ENST00000238961 BLOC1S2Q6QNY1 142 aa11.81□□□□□ -0.52
SLF2-201ENST00000238961 YEATS4O95619 227 aa11.81□□□□□ -0.52
SLF2-201ENST00000238961 FAM212AQ96EL1 285 aa11.81□□□□□ -0.52
SLF2-201ENST00000238961 NSRP1Q9H0G5 558 aaKnown RBP11.81□□□□□ -0.52
SLF2-201ENST00000238961 TBC1D5Q92609 795 aa11.8□□□□□ -0.52
SLF2-201ENST00000238961 PDCL2Q8N4E4 241 aa11.8□□□□□ -0.52
SLF2-201ENST00000238961 WDR33Q9C0J8 1336 aaKnown RBP11.8□□□□□ -0.52
SLF2-201ENST00000238961 GNAI2P04899 355 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms