RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 TRAPPC3LQ5T215 181 aa14.04□□□□□ -0.16
TNFAIP3-201ENST00000237289 EN1Q05925 392 aaPredicted RBP14.04□□□□□ -0.16
TNFAIP3-201ENST00000237289 FLIIQ13045 1269 aa14.04□□□□□ -0.16
TNFAIP3-201ENST00000237289 BICDL1Q6ZP65 573 aa14.04□□□□□ -0.16
TNFAIP3-201ENST00000237289 DDX21Q9NR30 783 aaKnown RBP eCLIP14.04□□□□□ -0.16
TNFAIP3-201ENST00000237289 HEG1Q9ULI3 1381 aa14.03□□□□□ -0.16
TNFAIP3-201ENST00000237289 COPS6Q7L5N1 327 aa14.03□□□□□ -0.16
TNFAIP3-201ENST00000237289 ZBTB3Q9H5J0 574 aa14.03□□□□□ -0.16
TNFAIP3-201ENST00000237289 CHMP3Q9Y3E7 222 aa14.03□□□□□ -0.16
TNFAIP3-201ENST00000237289 CEMIPQ8WUJ3 1361 aa14.03□□□□□ -0.16
TNFAIP3-201ENST00000237289 RRP1P56182 461 aaKnown RBP14.03□□□□□ -0.16
TNFAIP3-201ENST00000237289 CCDC125Q86Z20 511 aa14.03□□□□□ -0.16
TNFAIP3-201ENST00000237289 XAGE3Q8WTP9 111 aa14.03□□□□□ -0.16
TNFAIP3-201ENST00000237289 TXNRD1Q16881 649 aa14.03□□□□□ -0.16
TNFAIP3-201ENST00000237289 SLC27A3Q5K4L6 730 aa14.03□□□□□ -0.16
TNFAIP3-201ENST00000237289 ZNF521Q96K83 1311 aa14.02□□□□□ -0.16
TNFAIP3-201ENST00000237289 HSP90AB3PQ58FF7 597 aa14.02□□□□□ -0.16
TNFAIP3-201ENST00000237289 DZIP3Q86Y13 1208 aaKnown RBP14.02□□□□□ -0.16
TNFAIP3-201ENST00000237289 RGS17Q9UGC6 210 aaPredicted RBP14.02□□□□□ -0.16
TNFAIP3-201ENST00000237289 ANKRD13DQ6ZTN6 518 aa14.02□□□□□ -0.17
TNFAIP3-201ENST00000237289 TBC1D2BQ9UPU7 963 aa14.02□□□□□ -0.17
TNFAIP3-201ENST00000237289 USP54Q70EL1 1684 aa14.02□□□□□ -0.17
TNFAIP3-201ENST00000237289 FAM208AQ9UK61 1670 aaKnown RBP14.01□□□□□ -0.17
TNFAIP3-201ENST00000237289 ATF7IPQ6VMQ6 1270 aa14.01□□□□□ -0.17
TNFAIP3-201ENST00000237289 KLHL34Q8N239 644 aa14.01□□□□□ -0.17
TNFAIP3-201ENST00000237289 CRKLP46109 303 aaKnown RBP14.01□□□□□ -0.17
TNFAIP3-201ENST00000237289 SRCIN1Q9C0H9 1055 aa14.01□□□□□ -0.17
TNFAIP3-201ENST00000237289 DISP2A7MBM2 1401 aa14.01□□□□□ -0.17
TNFAIP3-201ENST00000237289 KDM6AO15550 1401 aaPredicted RBP14.01□□□□□ -0.17
TNFAIP3-201ENST00000237289 HSP90B1P14625 803 aaKnown RBP14.01□□□□□ -0.17
TNFAIP3-201ENST00000237289 COG6Q9Y2V7 657 aa14□□□□□ -0.17
TNFAIP3-201ENST00000237289 RGPD5Q99666 1765 aa14□□□□□ -0.17
TNFAIP3-201ENST00000237289 FLAD1Q8NFF5 587 aa14□□□□□ -0.17
TNFAIP3-201ENST00000237289 CCDC136Q96JN2 1154 aa14□□□□□ -0.17
TNFAIP3-201ENST00000237289 TMX4Q9H1E5 349 aaPredicted RBP14□□□□□ -0.17
TNFAIP3-201ENST00000237289 PLCH1Q4KWH8 1693 aa14□□□□□ -0.17
TNFAIP3-201ENST00000237289 PTPRCP08575 1304 aa14□□□□□ -0.17
TNFAIP3-201ENST00000237289 CCT4P50991 539 aaKnown RBP13.99□□□□□ -0.17
TNFAIP3-201ENST00000237289 TAF7LQ5H9L4 462 aa13.99□□□□□ -0.17
TNFAIP3-201ENST00000237289 DNAAF4Q8WXU2 420 aa13.99□□□□□ -0.17
TNFAIP3-201ENST00000237289 NWD2Q9ULI1 1742 aa13.99□□□□□ -0.17
TNFAIP3-201ENST00000237289 ERBB4Q15303 1308 aa13.99□□□□□ -0.17
TNFAIP3-201ENST00000237289 PI4KAP2A4QPH2 592 aa13.99□□□□□ -0.17
TNFAIP3-201ENST00000237289 PI4KAP1Q8N8J0 262 aa13.99□□□□□ -0.17
TNFAIP3-201ENST00000237289 LMO7Q8WWI1 1683 aa13.99□□□□□ -0.17
TNFAIP3-201ENST00000237289 PRAMEF22A3QJZ6 481 aa13.99□□□□□ -0.17
TNFAIP3-201ENST00000237289 OS9Q13438 667 aaPredicted RBP13.99□□□□□ -0.17
TNFAIP3-201ENST00000237289 MYD88Q99836 296 aa13.99□□□□□ -0.17
TNFAIP3-201ENST00000237289 DDX19BQ9UMR2 479 aa13.99□□□□□ -0.17
TNFAIP3-201ENST00000237289 MAP3K2Q9Y2U5 619 aa13.99□□□□□ -0.17
TNFAIP3-201ENST00000237289 PANK1Q8TE04 598 aa13.98□□□□□ -0.17
TNFAIP3-201ENST00000237289 ZBTB1Q9Y2K1 713 aa13.98□□□□□ -0.17
TNFAIP3-201ENST00000237289 F6X3S4 739 aa13.98□□□□□ -0.17
TNFAIP3-201ENST00000237289 RTL5Q5HYW3 569 aaPredicted RBP13.98□□□□□ -0.17
TNFAIP3-201ENST00000237289 PPP1R1BQ9UD71 204 aaPredicted RBP13.98□□□□□ -0.17
TNFAIP3-201ENST00000237289 GPTP24298 496 aa13.97□□□□□ -0.17
TNFAIP3-201ENST00000237289 DEFB132Q7Z7B7 95 aa13.97□□□□□ -0.17
TNFAIP3-201ENST00000237289 MRPL50Q8N5N7 158 aaKnown RBP13.97□□□□□ -0.17
TNFAIP3-201ENST00000237289 PHAXQ9H814 394 aaKnown RBP13.97□□□□□ -0.17
TNFAIP3-201ENST00000237289 BCL9O00512 1426 aa13.97□□□□□ -0.17
TNFAIP3-201ENST00000237289 KSR2Q6VAB6 950 aa13.97□□□□□ -0.17
TNFAIP3-201ENST00000237289 ABCA3Q99758 1704 aa13.97□□□□□ -0.17
TNFAIP3-201ENST00000237289 UBTFL1P0CB47 393 aaPredicted RBP13.97□□□□□ -0.17
TNFAIP3-201ENST00000237289 IL6STP40189 918 aaPredicted RBP13.97□□□□□ -0.17
TNFAIP3-201ENST00000237289 GTF3C3Q9Y5Q9 886 aa13.97□□□□□ -0.17
TNFAIP3-201ENST00000237289 COL18A1P39060 1754 aa13.96□□□□□ -0.17
TNFAIP3-201ENST00000237289 SETDB2Q96T68 719 aa13.96□□□□□ -0.17
TNFAIP3-201ENST00000237289 GNAI3P08754 354 aa13.96□□□□□ -0.17
TNFAIP3-201ENST00000237289 PARP4Q9UKK3 1724 aaKnown RBP13.96□□□□□ -0.17
TNFAIP3-201ENST00000237289 PDE3AQ14432 1141 aa13.96□□□□□ -0.18
TNFAIP3-201ENST00000237289 EZH2Q15910 746 aaKnown RBP13.96□□□□□ -0.18
TNFAIP3-201ENST00000237289 TRMT2AQ8IZ69 625 aaKnown RBP13.96□□□□□ -0.18
TNFAIP3-201ENST00000237289 ATP5J2-PTCD1G3V325 749 aa13.95□□□□□ -0.18
TNFAIP3-201ENST00000237289 RGS12O14924 1447 aa13.95□□□□□ -0.18
TNFAIP3-201ENST00000237289 PLSCR1O15162 318 aa13.95□□□□□ -0.18
TNFAIP3-201ENST00000237289 HMMRO75330 724 aa13.95□□□□□ -0.18
TNFAIP3-201ENST00000237289 CYP19A1P11511 503 aaPredicted RBP13.95□□□□□ -0.18
TNFAIP3-201ENST00000237289 NIP7Q9Y221 180 aaKnown RBP eCLIP13.95□□□□□ -0.18
TNFAIP3-201ENST00000237289 PPP1R42Q7Z4L9 355 aa13.95□□□□□ -0.18
TNFAIP3-201ENST00000237289 TRMT112Q9UI30 125 aaKnown RBP13.95□□□□□ -0.18
TNFAIP3-201ENST00000237289 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.94□□□□□ -0.18
TNFAIP3-201ENST00000237289 RPS6KA4O75676 772 aa13.94□□□□□ -0.18
TNFAIP3-201ENST00000237289 PLBD2Q8NHP8 589 aa13.94□□□□□ -0.18
TNFAIP3-201ENST00000237289 ARHGAP45Q92619 1136 aa13.94□□□□□ -0.18
TNFAIP3-201ENST00000237289 PTF1AQ7RTS3 328 aa13.94□□□□□ -0.18
TNFAIP3-201ENST00000237289 MARF1Q9Y4F3 1742 aaKnown RBP13.94□□□□□ -0.18
TNFAIP3-201ENST00000237289 G2E3Q7L622 706 aa13.93□□□□□ -0.18
TNFAIP3-201ENST00000237289 POLD1P28340 1107 aa13.93□□□□□ -0.18
TNFAIP3-201ENST00000237289 NBPF5PQ86XG9 351 aaPredicted RBP13.93□□□□□ -0.18
TNFAIP3-201ENST00000237289 CRBNQ96SW2 442 aa13.93□□□□□ -0.18
TNFAIP3-201ENST00000237289 CWC25Q9NXE8 425 aaPredicted RBP13.93□□□□□ -0.18
TNFAIP3-201ENST00000237289 RGPD2P0DJD1 1756 aa13.93□□□□□ -0.18
TNFAIP3-201ENST00000237289 TRIM27P14373 513 aa13.93□□□□□ -0.18
TNFAIP3-201ENST00000237289 ITPK1Q13572 414 aa13.93□□□□□ -0.18
TNFAIP3-201ENST00000237289 RC3H1Q5TC82 1133 aaKnown RBP13.92□□□□□ -0.18
TNFAIP3-201ENST00000237289 PROSER3Q2NL68 480 aa13.92□□□□□ -0.18
TNFAIP3-201ENST00000237289 PARP3Q9Y6F1 533 aa13.92□□□□□ -0.18
TNFAIP3-201ENST00000237289 TMEM57Q8N5G2 664 aa13.91□□□□□ -0.18
TNFAIP3-201ENST00000237289 TTLL7Q6ZT98 887 aa13.91□□□□□ -0.18
TNFAIP3-201ENST00000237289 LINC00116Q8NCU8 138 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms