RNA–Protein interactions for RNA: ENST00000230418.8

PTK7-201, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 3,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-201ENST00000230418 PTMSP20962 102 aa17.41■□□□□ 0.38
PTK7-201ENST00000230418 ANKRD13DQ6ZTN6 518 aa17.41■□□□□ 0.38
PTK7-201ENST00000230418 H3BQV1 296 aa17.4■□□□□ 0.38
PTK7-201ENST00000230418 GSPT1P15170 499 aaKnown RBP17.4■□□□□ 0.38
PTK7-201ENST00000230418 SKOR2Q2VWA4 1001 aaPredicted RBP17.4■□□□□ 0.38
PTK7-201ENST00000230418 IFFO2Q5TF58 517 aa17.4■□□□□ 0.38
PTK7-201ENST00000230418 RNF20Q5VTR2 975 aa17.4■□□□□ 0.38
PTK7-201ENST00000230418 FAM184AQ8NB25 1140 aa17.4■□□□□ 0.38
PTK7-201ENST00000230418 PNPLA6Q8IY17 1366 aa17.4■□□□□ 0.38
PTK7-201ENST00000230418 GNL2Q13823 731 aaKnown RBP17.4■□□□□ 0.38
PTK7-201ENST00000230418 IGSF1Q8N6C5 1336 aa17.4■□□□□ 0.38
PTK7-201ENST00000230418 GLRX3O76003 335 aaKnown RBP17.4■□□□□ 0.38
PTK7-201ENST00000230418 CPS1P31327 1500 aa17.4■□□□□ 0.38
PTK7-201ENST00000230418 FIBPO43427 364 aa17.39■□□□□ 0.38
PTK7-201ENST00000230418 CASTP20810 708 aaKnown RBP17.39■□□□□ 0.38
PTK7-201ENST00000230418 MSNP26038 577 aaKnown RBP17.39■□□□□ 0.37
PTK7-201ENST00000230418 EIF4A1P60842 406 aaKnown RBP17.39■□□□□ 0.37
PTK7-201ENST00000230418 KSR2Q6VAB6 950 aa17.39■□□□□ 0.37
PTK7-201ENST00000230418 TCEANC2Q96MN5 208 aa17.39■□□□□ 0.37
PTK7-201ENST00000230418 LRRC7Q96NW7 1537 aa17.39■□□□□ 0.37
PTK7-201ENST00000230418 TMOD3Q9NYL9 352 aa17.39■□□□□ 0.37
PTK7-201ENST00000230418 ARHGEF10O15013 1369 aa17.39■□□□□ 0.37
PTK7-201ENST00000230418 RAB11FIP3O75154 756 aa17.38■□□□□ 0.37
PTK7-201ENST00000230418 KIF6Q6ZMV9 814 aa17.38■□□□□ 0.37
PTK7-201ENST00000230418 STK11IPQ8N1F8 1099 aa17.38■□□□□ 0.37
PTK7-201ENST00000230418 PPFIA3O75145 1194 aa17.38■□□□□ 0.37
PTK7-201ENST00000230418 USP44Q9H0E7 712 aa17.38■□□□□ 0.37
PTK7-201ENST00000230418 GRM8O00222 908 aa17.38■□□□□ 0.37
PTK7-201ENST00000230418 SNRPA1P09661 255 aaKnown RBP17.38■□□□□ 0.37
PTK7-201ENST00000230418 PROSER3Q2NL68 480 aa17.38■□□□□ 0.37
PTK7-201ENST00000230418 GDPD2Q9HCC8 539 aa17.38■□□□□ 0.37
PTK7-201ENST00000230418 RTL1A6NKG5 1358 aa17.38■□□□□ 0.37
PTK7-201ENST00000230418 MPNDQ8N594 471 aa17.38■□□□□ 0.37
PTK7-201ENST00000230418 CDK12Q9NYV4 1490 aaPredicted RBP17.37■□□□□ 0.37
PTK7-201ENST00000230418 SYAP1Q96A49 352 aaPredicted RBP17.37■□□□□ 0.37
PTK7-201ENST00000230418 PREX1Q8TCU6 1659 aa17.37■□□□□ 0.37
PTK7-201ENST00000230418 PPLO60437 1756 aa17.37■□□□□ 0.37
PTK7-201ENST00000230418 KIAA1210Q9ULL0 1709 aa17.37■□□□□ 0.37
PTK7-201ENST00000230418 CCDC57Q2TAC2 916 aa17.37■□□□□ 0.37
PTK7-201ENST00000230418 ECHDC1Q9NTX5 307 aa17.37■□□□□ 0.37
PTK7-201ENST00000230418 DIP2BQ9P265 1576 aa17.36■□□□□ 0.37
PTK7-201ENST00000230418 CPSF1Q10570 1443 aaKnown RBP17.36■□□□□ 0.37
PTK7-201ENST00000230418 ZNF790Q6PG37 636 aa17.36■□□□□ 0.37
PTK7-201ENST00000230418 ZCRB1Q8TBF4 217 aaKnown RBP17.36■□□□□ 0.37
PTK7-201ENST00000230418 ZNF496Q96IT1 587 aaPredicted RBP17.36■□□□□ 0.37
PTK7-201ENST00000230418 SNRKQ9NRH2 765 aa17.36■□□□□ 0.37
PTK7-201ENST00000230418 CNNM1Q9NRU3 951 aa17.36■□□□□ 0.37
PTK7-201ENST00000230418 ZGPATQ8N5A5 531 aaKnown RBP17.36■□□□□ 0.37
PTK7-201ENST00000230418 FERMT3Q86UX7 667 aa17.35■□□□□ 0.37
PTK7-201ENST00000230418 ESYT1Q9BSJ8 1104 aa17.35■□□□□ 0.37
PTK7-201ENST00000230418 CYP46A1Q9Y6A2 500 aa17.35■□□□□ 0.37
PTK7-201ENST00000230418 ZC3H13Q5T200 1668 aaKnown RBP17.35■□□□□ 0.37
PTK7-201ENST00000230418 DRC7Q8IY82 874 aa17.35■□□□□ 0.37
PTK7-201ENST00000230418 CCDC83Q8IWF9 413 aa17.35■□□□□ 0.37
PTK7-201ENST00000230418 AXIN2Q9Y2T1 843 aa17.35■□□□□ 0.37
PTK7-201ENST00000230418 CPA1P15085 419 aa17.34■□□□□ 0.37
PTK7-201ENST00000230418 CEBPZQ03701 1054 aaKnown RBP17.34■□□□□ 0.37
PTK7-201ENST00000230418 ADAMTS13Q76LX8 1427 aa17.34■□□□□ 0.37
PTK7-201ENST00000230418 BICC1Q9H694 974 aaKnown RBP17.34■□□□□ 0.37
PTK7-201ENST00000230418 NDUFB9Q9Y6M9 179 aa17.34■□□□□ 0.37
PTK7-201ENST00000230418 CEP126Q9P2H0 1117 aa17.34■□□□□ 0.37
PTK7-201ENST00000230418 MYO3AQ8NEV4 1616 aa17.34■□□□□ 0.37
PTK7-201ENST00000230418 KIAA0232Q92628 1395 aa17.33■□□□□ 0.37
PTK7-201ENST00000230418 LMBR1LQ6UX01 489 aa17.33■□□□□ 0.37
PTK7-201ENST00000230418 ARHGEF25Q86VW2 580 aa17.33■□□□□ 0.37
PTK7-201ENST00000230418 USP26Q9BXU7 913 aa17.33■□□□□ 0.37
PTK7-201ENST00000230418 USP16Q9Y5T5 823 aa17.33■□□□□ 0.37
PTK7-201ENST00000230418 SOS1Q07889 1333 aaPredicted RBP17.33■□□□□ 0.36
PTK7-201ENST00000230418 LINS1Q8NG48 757 aa17.33■□□□□ 0.36
PTK7-201ENST00000230418 FBXW7Q969H0 707 aa17.33■□□□□ 0.36
PTK7-201ENST00000230418 BICDL1Q6ZP65 573 aa17.33■□□□□ 0.36
PTK7-201ENST00000230418 PDRG1Q9NUG6 133 aa17.33■□□□□ 0.36
PTK7-201ENST00000230418 TMEM131LA2VDJ0 1609 aa17.32■□□□□ 0.36
PTK7-201ENST00000230418 DDX46Q7L014 1031 aaKnown RBP17.32■□□□□ 0.36
PTK7-201ENST00000230418 TMEM94Q12767 1356 aa17.32■□□□□ 0.36
PTK7-201ENST00000230418 CIZ1Q9ULV3 898 aaPredicted RBP17.32■□□□□ 0.36
PTK7-201ENST00000230418 CD163L1Q9NR16 1453 aa17.32■□□□□ 0.36
PTK7-201ENST00000230418 A1BGP04217 495 aa17.31■□□□□ 0.36
PTK7-201ENST00000230418 MCM2P49736 904 aa17.31■□□□□ 0.36
PTK7-201ENST00000230418 TTC39AQ5SRH9 613 aa17.31■□□□□ 0.36
PTK7-201ENST00000230418 BLOC1S2Q6QNY1 142 aa17.31■□□□□ 0.36
PTK7-201ENST00000230418 DDX21Q9NR30 783 aaKnown RBP eCLIP17.31■□□□□ 0.36
PTK7-201ENST00000230418 GIGYF1O75420 1035 aaPredicted RBP17.31■□□□□ 0.36
PTK7-201ENST00000230418 TMX3Q96JJ7 454 aa17.31■□□□□ 0.36
PTK7-201ENST00000230418 ISY1Q9ULR0 285 aaKnown RBP17.31■□□□□ 0.36
PTK7-201ENST00000230418 CD2BP2O95400 341 aaKnown RBP17.3■□□□□ 0.36
PTK7-201ENST00000230418 CHMLP26374 656 aa17.3■□□□□ 0.36
PTK7-201ENST00000230418 ACSBG1Q96GR2 724 aa17.3■□□□□ 0.36
PTK7-201ENST00000230418 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.3■□□□□ 0.36
PTK7-201ENST00000230418 ATP6V1DQ9Y5K8 247 aa17.3■□□□□ 0.36
PTK7-201ENST00000230418 PTPRUQ92729 1446 aa17.3■□□□□ 0.36
PTK7-201ENST00000230418 NASPP49321 788 aaPredicted RBP17.3■□□□□ 0.36
PTK7-201ENST00000230418 DDX11Q96FC9 970 aa17.3■□□□□ 0.36
PTK7-201ENST00000230418 SF3A1Q15459 793 aaKnown RBP17.3■□□□□ 0.36
PTK7-201ENST00000230418 CWC22Q9HCG8 908 aaKnown RBP17.3■□□□□ 0.36
PTK7-201ENST00000230418 GOLIM4O00461 696 aa17.29■□□□□ 0.36
PTK7-201ENST00000230418 PSMA5P28066 241 aa17.29■□□□□ 0.36
PTK7-201ENST00000230418 MRE11P49959 708 aa17.29■□□□□ 0.36
PTK7-201ENST00000230418 VPS37DQ86XT2 251 aa17.29■□□□□ 0.36
PTK7-201ENST00000230418 BICD2Q8TD16 824 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms