RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 VPS72Q15906 364 aa21.11■□□□□ 0.97
TVP23C-201ENST00000225576 SKAP1Q86WV1 359 aa21.11■□□□□ 0.97
TVP23C-201ENST00000225576 RPAP2Q8IXW5 612 aaPredicted RBP21.11■□□□□ 0.97
TVP23C-201ENST00000225576 USP16Q9Y5T5 823 aa21.11■□□□□ 0.97
TVP23C-201ENST00000225576 LRP6O75581 1613 aa21.11■□□□□ 0.97
TVP23C-201ENST00000225576 BCL9LQ86UU0 1499 aa21.1■□□□□ 0.97
TVP23C-201ENST00000225576 PI4KAP2A4QPH2 592 aa21.1■□□□□ 0.97
TVP23C-201ENST00000225576 DDB1Q16531 1140 aa21.1■□□□□ 0.97
TVP23C-201ENST00000225576 PI4KAP1Q8N8J0 262 aa21.1■□□□□ 0.97
TVP23C-201ENST00000225576 DNAAF4Q8WXU2 420 aa21.1■□□□□ 0.97
TVP23C-201ENST00000225576 CCDC9Q9Y3X0 531 aaKnown RBP21.1■□□□□ 0.97
TVP23C-201ENST00000225576 PAPPAQ13219 1627 aa21.1■□□□□ 0.97
TVP23C-201ENST00000225576 ERBB4Q15303 1308 aa21.09■□□□□ 0.97
TVP23C-201ENST00000225576 GNAI3P08754 354 aa21.09■□□□□ 0.97
TVP23C-201ENST00000225576 KSR2Q6VAB6 950 aa21.09■□□□□ 0.97
TVP23C-201ENST00000225576 SIRT2Q8IXJ6 389 aa21.09■□□□□ 0.97
TVP23C-201ENST00000225576 PDZRN3Q9UPQ7 1066 aa21.09■□□□□ 0.97
TVP23C-201ENST00000225576 TOGARAM1Q9Y4F4 1720 aa21.09■□□□□ 0.97
TVP23C-201ENST00000225576 KCPQ6ZWJ8 1503 aa21.09■□□□□ 0.97
TVP23C-201ENST00000225576 ADCY9O60503 1353 aa21.09■□□□□ 0.97
TVP23C-201ENST00000225576 DDX58O95786 925 aaKnown RBP21.09■□□□□ 0.97
TVP23C-201ENST00000225576 ANKRD44Q8N8A2 993 aa21.09■□□□□ 0.97
TVP23C-201ENST00000225576 PIGBQ92521 554 aa21.09■□□□□ 0.97
TVP23C-201ENST00000225576 SRCIN1Q9C0H9 1055 aa21.09■□□□□ 0.97
TVP23C-201ENST00000225576 C5P01031 1676 aa21.08■□□□□ 0.97
TVP23C-201ENST00000225576 GLI3P10071 1580 aa21.08■□□□□ 0.97
TVP23C-201ENST00000225576 ATP10DQ9P241 1426 aa21.08■□□□□ 0.97
TVP23C-201ENST00000225576 GCC1Q96CN9 775 aa21.08■□□□□ 0.96
TVP23C-201ENST00000225576 UBR2Q8IWV8 1755 aa21.07■□□□□ 0.96
TVP23C-201ENST00000225576 BEND3Q5T5X7 828 aa21.07■□□□□ 0.96
TVP23C-201ENST00000225576 N4BP2Q86UW6 1770 aaPredicted RBP21.06■□□□□ 0.96
TVP23C-201ENST00000225576 GNAI2P04899 355 aa21.06■□□□□ 0.96
TVP23C-201ENST00000225576 RGS3P49796 1198 aa21.06■□□□□ 0.96
TVP23C-201ENST00000225576 CEP85Q6P2H3 762 aa21.06■□□□□ 0.96
TVP23C-201ENST00000225576 LRP10Q7Z4F1 713 aa21.06■□□□□ 0.96
TVP23C-201ENST00000225576 BCL9O00512 1426 aa21.06■□□□□ 0.96
TVP23C-201ENST00000225576 VSIG10Q8N0Z9 540 aa21.05■□□□□ 0.96
TVP23C-201ENST00000225576 USP44Q9H0E7 712 aa21.05■□□□□ 0.96
TVP23C-201ENST00000225576 MAP3K2Q9Y2U5 619 aa21.05■□□□□ 0.96
TVP23C-201ENST00000225576 PTCD1O75127 700 aaKnown RBP21.04■□□□□ 0.96
TVP23C-201ENST00000225576 ALDH1L1O75891 902 aa21.04■□□□□ 0.96
TVP23C-201ENST00000225576 ATG3Q9NT62 314 aa21.04■□□□□ 0.96
TVP23C-201ENST00000225576 TEX13AQ9BXU3 409 aaPredicted RBP21.04■□□□□ 0.96
TVP23C-201ENST00000225576 USP21Q9UK80 565 aa21.04■□□□□ 0.96
TVP23C-201ENST00000225576 ASAP1Q9ULH1 1129 aa21.04■□□□□ 0.96
TVP23C-201ENST00000225576 RBM19Q9Y4C8 960 aaKnown RBP21.04■□□□□ 0.96
TVP23C-201ENST00000225576 MYL6BP14649 208 aa21.03■□□□□ 0.96
TVP23C-201ENST00000225576 NUCB1Q02818 461 aa21.03■□□□□ 0.96
TVP23C-201ENST00000225576 MARCH10Q8NA82 808 aaPredicted RBP21.03■□□□□ 0.96
TVP23C-201ENST00000225576 XAGE3Q8WTP9 111 aa21.03■□□□□ 0.96
TVP23C-201ENST00000225576 LAMB4A4D0S4 1761 aa21.03■□□□□ 0.96
TVP23C-201ENST00000225576 AIMP1Q12904 312 aaKnown RBP21.02■□□□□ 0.96
TVP23C-201ENST00000225576 COPS6Q7L5N1 327 aa21.02■□□□□ 0.96
TVP23C-201ENST00000225576 DCTPP1Q9H773 170 aa21.02■□□□□ 0.96
TVP23C-201ENST00000225576 IBTKQ9P2D0 1353 aaPredicted RBP21.02■□□□□ 0.96
TVP23C-201ENST00000225576 HMMRO75330 724 aa21.01■□□□□ 0.95
TVP23C-201ENST00000225576 UBTFL1P0CB47 393 aaPredicted RBP21.01■□□□□ 0.95
TVP23C-201ENST00000225576 PDE4AP27815 886 aa21■□□□□ 0.95
TVP23C-201ENST00000225576 PRIM1P49642 420 aaKnown RBP21■□□□□ 0.95
TVP23C-201ENST00000225576 FAM98CQ17RN3 349 aaKnown RBP21■□□□□ 0.95
TVP23C-201ENST00000225576 RIC3Q7Z5B4 369 aa21■□□□□ 0.95
TVP23C-201ENST00000225576 LINS1Q8NG48 757 aa21■□□□□ 0.95
TVP23C-201ENST00000225576 NBPF26B4DH59 902 aa20.99■□□□□ 0.95
TVP23C-201ENST00000225576 NBPF14Q5TI25 921 aa20.99■□□□□ 0.95
TVP23C-201ENST00000225576 MEX3CQ5U5Q3 659 aaKnown RBP20.99■□□□□ 0.95
TVP23C-201ENST00000225576 NBPF10Q6P3W6 841 aaKnown RBP20.99■□□□□ 0.95
TVP23C-201ENST00000225576 ANKRD13DQ6ZTN6 518 aa20.99■□□□□ 0.95
TVP23C-201ENST00000225576 NBPF15Q8N660 670 aa20.99■□□□□ 0.95
TVP23C-201ENST00000225576 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.99■□□□□ 0.95
TVP23C-201ENST00000225576 ITGB4P16144 1822 aa20.99■□□□□ 0.95
TVP23C-201ENST00000225576 ATP8B2P98198 1209 aa20.99■□□□□ 0.95
TVP23C-201ENST00000225576 CHD1LQ86WJ1 897 aa20.99■□□□□ 0.95
TVP23C-201ENST00000225576 BACH2Q9BYV9 841 aa20.99■□□□□ 0.95
TVP23C-201ENST00000225576 SYTL4Q96C24 671 aaPredicted RBP20.98■□□□□ 0.95
TVP23C-201ENST00000225576 METTL22Q9BUU2 404 aaPredicted RBP20.98■□□□□ 0.95
TVP23C-201ENST00000225576 HDAC5Q9UQL6 1122 aa20.98■□□□□ 0.95
TVP23C-201ENST00000225576 A1BGP04217 495 aa20.97■□□□□ 0.95
TVP23C-201ENST00000225576 NEXNQ0ZGT2 675 aa20.97■□□□□ 0.95
TVP23C-201ENST00000225576 LRRFIP2Q9Y608 721 aaKnown RBP20.97■□□□□ 0.95
TVP23C-201ENST00000225576 PIP4K2AP48426 406 aaPredicted RBP20.96■□□□□ 0.95
TVP23C-201ENST00000225576 ANKRD45Q5TZF3 282 aa20.96■□□□□ 0.95
TVP23C-201ENST00000225576 PLBD2Q8NHP8 589 aa20.96■□□□□ 0.95
TVP23C-201ENST00000225576 RBM42Q9BTD8 480 aaKnown RBP20.96■□□□□ 0.95
TVP23C-201ENST00000225576 STARD3NLO95772 234 aa20.95■□□□□ 0.94
TVP23C-201ENST00000225576 NBPF7P0C2Y1 421 aaPredicted RBP20.95■□□□□ 0.94
TVP23C-201ENST00000225576 FAM161AQ3B820 660 aa20.95■□□□□ 0.94
TVP23C-201ENST00000225576 DNAJC10Q8IXB1 793 aa20.95■□□□□ 0.94
TVP23C-201ENST00000225576 UTYO14607 1347 aa20.95■□□□□ 0.94
TVP23C-201ENST00000225576 C9orf78Q9NZ63 289 aaPredicted RBP20.94■□□□□ 0.94
TVP23C-201ENST00000225576 RGS17Q9UGC6 210 aaPredicted RBP20.94■□□□□ 0.94
TVP23C-201ENST00000225576 DOT1LQ8TEK3 1739 aa20.94■□□□□ 0.94
TVP23C-201ENST00000225576 IGKV5-2P06315 115 aa20.94■□□□□ 0.94
TVP23C-201ENST00000225576 CWF19L2Q2TBE0 894 aaKnown RBP20.94■□□□□ 0.94
TVP23C-201ENST00000225576 LNPKQ9C0E8 428 aa20.94■□□□□ 0.94
TVP23C-201ENST00000225576 AFF2P51816 1311 aa20.93■□□□□ 0.94
TVP23C-201ENST00000225576 GJD4Q96KN9 370 aaPredicted RBP20.93■□□□□ 0.94
TVP23C-201ENST00000225576 NEURL1BA8MQ27 555 aa20.92■□□□□ 0.94
TVP23C-201ENST00000225576 GRM8O00222 908 aa20.92■□□□□ 0.94
TVP23C-201ENST00000225576 ACSBG1Q96GR2 724 aa20.92■□□□□ 0.94
TVP23C-201ENST00000225576 SLC4A9Q96Q91 983 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 358.3 ms