RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 RBM6P78332 1123 aaKnown RBP20.3■□□□□ 0.84
SNRPD3-201ENST00000215829 FLIIQ13045 1269 aa20.29■□□□□ 0.84
SNRPD3-201ENST00000215829 MVPQ14764 893 aaKnown RBP20.29■□□□□ 0.84
SNRPD3-201ENST00000215829 ABCC4O15439 1325 aa20.29■□□□□ 0.84
SNRPD3-201ENST00000215829 VSIG10Q8N0Z9 540 aa20.29■□□□□ 0.84
SNRPD3-201ENST00000215829 TMEM57Q8N5G2 664 aa20.28■□□□□ 0.84
SNRPD3-201ENST00000215829 DDX21Q9NR30 783 aaKnown RBP eCLIP20.28■□□□□ 0.84
SNRPD3-201ENST00000215829 RGS12O14924 1447 aa20.27■□□□□ 0.84
SNRPD3-201ENST00000215829 KCNQ2O43526 872 aa20.27■□□□□ 0.84
SNRPD3-201ENST00000215829 PDIA6Q15084 440 aa20.27■□□□□ 0.84
SNRPD3-201ENST00000215829 PHAXQ9H814 394 aaKnown RBP20.27■□□□□ 0.84
SNRPD3-201ENST00000215829 LAMB4A4D0S4 1761 aa20.27■□□□□ 0.84
SNRPD3-201ENST00000215829 HYPKQ9NX55 129 aa20.26■□□□□ 0.83
SNRPD3-201ENST00000215829 FKBP5Q13451 457 aaPredicted RBP20.26■□□□□ 0.83
SNRPD3-201ENST00000215829 ITPRIPQ8IWB1 547 aa20.26■□□□□ 0.83
SNRPD3-201ENST00000215829 RBM42Q9BTD8 480 aaKnown RBP20.26■□□□□ 0.83
SNRPD3-201ENST00000215829 TEX13AQ9BXU3 409 aaPredicted RBP20.26■□□□□ 0.83
SNRPD3-201ENST00000215829 ANXA1P04083 346 aa20.25■□□□□ 0.83
SNRPD3-201ENST00000215829 AAMPQ13685 434 aa20.25■□□□□ 0.83
SNRPD3-201ENST00000215829 PROSER3Q2NL68 480 aa20.25■□□□□ 0.83
SNRPD3-201ENST00000215829 DDX19BQ9UMR2 479 aa20.25■□□□□ 0.83
SNRPD3-201ENST00000215829 FAM182BQ5T319 152 aa20.24■□□□□ 0.83
SNRPD3-201ENST00000215829 ERBB4Q15303 1308 aa20.24■□□□□ 0.83
SNRPD3-201ENST00000215829 RGS17Q9UGC6 210 aaPredicted RBP20.23■□□□□ 0.83
SNRPD3-201ENST00000215829 RXRBP28702 533 aa20.23■□□□□ 0.83
SNRPD3-201ENST00000215829 INTS3Q68E01 1043 aaKnown RBP20.23■□□□□ 0.83
SNRPD3-201ENST00000215829 KRT27Q7Z3Y8 459 aa20.23■□□□□ 0.83
SNRPD3-201ENST00000215829 SMARCC1Q92922 1105 aaPredicted RBP20.23■□□□□ 0.83
SNRPD3-201ENST00000215829 B4GALNT3Q6L9W6 998 aa20.22■□□□□ 0.83
SNRPD3-201ENST00000215829 SLC4A9Q96Q91 983 aa20.22■□□□□ 0.83
SNRPD3-201ENST00000215829 BRWD3Q6RI45 1802 aa20.22■□□□□ 0.83
SNRPD3-201ENST00000215829 F6X3S4 739 aa20.21■□□□□ 0.83
SNRPD3-201ENST00000215829 DNAJC10Q8IXB1 793 aa20.21■□□□□ 0.83
SNRPD3-201ENST00000215829 CCDC136Q96JN2 1154 aa20.21■□□□□ 0.83
SNRPD3-201ENST00000215829 NHSQ6T4R5 1651 aa20.21■□□□□ 0.83
SNRPD3-201ENST00000215829 MYL6BP14649 208 aa20.21■□□□□ 0.83
SNRPD3-201ENST00000215829 LRP10Q7Z4F1 713 aa20.21■□□□□ 0.83
SNRPD3-201ENST00000215829 STARD3NLO95772 234 aa20.2■□□□□ 0.82
SNRPD3-201ENST00000215829 PALLDQ8WX93 1383 aa20.2■□□□□ 0.82
SNRPD3-201ENST00000215829 SBF2Q86WG5 1849 aa20.19■□□□□ 0.82
SNRPD3-201ENST00000215829 NBPF26B4DH59 902 aa20.19■□□□□ 0.82
SNRPD3-201ENST00000215829 A1BGP04217 495 aa20.19■□□□□ 0.82
SNRPD3-201ENST00000215829 CCT4P50991 539 aaKnown RBP20.19■□□□□ 0.82
SNRPD3-201ENST00000215829 NBPF14Q5TI25 921 aa20.19■□□□□ 0.82
SNRPD3-201ENST00000215829 NBPF10Q6P3W6 841 aaKnown RBP20.19■□□□□ 0.82
SNRPD3-201ENST00000215829 FAM196AQ6ZSG2 479 aa20.19■□□□□ 0.82
SNRPD3-201ENST00000215829 PTF1AQ7RTS3 328 aa20.19■□□□□ 0.82
SNRPD3-201ENST00000215829 NBPF15Q8N660 670 aa20.19■□□□□ 0.82
SNRPD3-201ENST00000215829 CHMP4BQ9H444 224 aaKnown RBP20.19■□□□□ 0.82
SNRPD3-201ENST00000215829 LOC102724428A0A0B4J2F2 783 aa20.18■□□□□ 0.82
SNRPD3-201ENST00000215829 ZBTB7BO15156 539 aaPredicted RBP20.18■□□□□ 0.82
SNRPD3-201ENST00000215829 SIK1P57059 783 aa20.18■□□□□ 0.82
SNRPD3-201ENST00000215829 SLC4A10Q6U841 1118 aa20.18■□□□□ 0.82
SNRPD3-201ENST00000215829 PI4KAP2A4QPH2 592 aa20.18■□□□□ 0.82
SNRPD3-201ENST00000215829 PIP4K2AP48426 406 aaPredicted RBP20.18■□□□□ 0.82
SNRPD3-201ENST00000215829 PI4KAP1Q8N8J0 262 aa20.18■□□□□ 0.82
SNRPD3-201ENST00000215829 DDX58O95786 925 aaKnown RBP20.17■□□□□ 0.82
SNRPD3-201ENST00000215829 CYP19A1P11511 503 aaPredicted RBP20.17■□□□□ 0.82
SNRPD3-201ENST00000215829 AIMP1Q12904 312 aaKnown RBP20.17■□□□□ 0.82
SNRPD3-201ENST00000215829 POTEAQ6S8J7 498 aa20.17■□□□□ 0.82
SNRPD3-201ENST00000215829 KSR2Q6VAB6 950 aa20.17■□□□□ 0.82
SNRPD3-201ENST00000215829 COPS6Q7L5N1 327 aa20.17■□□□□ 0.82
SNRPD3-201ENST00000215829 XAGE3Q8WTP9 111 aa20.17■□□□□ 0.82
SNRPD3-201ENST00000215829 ZBTB40Q9NUA8 1239 aa20.17■□□□□ 0.82
SNRPD3-201ENST00000215829 PXDNLA1KZ92 1463 aa20.17■□□□□ 0.82
SNRPD3-201ENST00000215829 BTAF1O14981 1849 aa20.16■□□□□ 0.82
SNRPD3-201ENST00000215829 ATP6V1AP38606 617 aa20.16■□□□□ 0.82
SNRPD3-201ENST00000215829 DNAAF4Q8WXU2 420 aa20.16■□□□□ 0.82
SNRPD3-201ENST00000215829 ADCY9O60503 1353 aa20.16■□□□□ 0.82
SNRPD3-201ENST00000215829 TJP1Q07157 1748 aa20.16■□□□□ 0.82
SNRPD3-201ENST00000215829 BCL11BQ9C0K0 894 aaPredicted RBP20.16■□□□□ 0.82
SNRPD3-201ENST00000215829 MAP3K2Q9Y2U5 619 aa20.14■□□□□ 0.81
SNRPD3-201ENST00000215829 ZNF831Q5JPB2 1677 aa20.14■□□□□ 0.81
SNRPD3-201ENST00000215829 CICQ96RK0 1608 aaPredicted RBP20.14■□□□□ 0.81
SNRPD3-201ENST00000215829 N4BP2Q86UW6 1770 aaPredicted RBP20.13■□□□□ 0.81
SNRPD3-201ENST00000215829 ANKRD13DQ6ZTN6 518 aa20.13■□□□□ 0.81
SNRPD3-201ENST00000215829 RIC3Q7Z5B4 369 aa20.13■□□□□ 0.81
SNRPD3-201ENST00000215829 PCDHB15Q9Y5E8 787 aa20.13■□□□□ 0.81
SNRPD3-201ENST00000215829 ITPK1Q13572 414 aa20.12■□□□□ 0.81
SNRPD3-201ENST00000215829 BEND3Q5T5X7 828 aa20.12■□□□□ 0.81
SNRPD3-201ENST00000215829 ATP10DQ9P241 1426 aa20.12■□□□□ 0.81
SNRPD3-201ENST00000215829 SRCIN1Q9C0H9 1055 aa20.11■□□□□ 0.81
SNRPD3-201ENST00000215829 PLBD2Q8NHP8 589 aa20.1■□□□□ 0.81
SNRPD3-201ENST00000215829 ILDR1Q86SU0 546 aaPredicted RBP20.09■□□□□ 0.81
SNRPD3-201ENST00000215829 ZBTB1Q9Y2K1 713 aa20.09■□□□□ 0.81
SNRPD3-201ENST00000215829 INTS5Q6P9B9 1019 aaKnown RBP20.08■□□□□ 0.81
SNRPD3-201ENST00000215829 TTLL7Q6ZT98 887 aa20.08■□□□□ 0.81
SNRPD3-201ENST00000215829 MEIS3Q99687 375 aa20.08■□□□□ 0.81
SNRPD3-201ENST00000215829 METTL22Q9BUU2 404 aaPredicted RBP20.08■□□□□ 0.81
SNRPD3-201ENST00000215829 CCDC87Q9NVE4 849 aa20.08■□□□□ 0.81
SNRPD3-201ENST00000215829 ALDH1L1O75891 902 aa20.08■□□□□ 0.8
SNRPD3-201ENST00000215829 TRIM37O94972 964 aa20.08■□□□□ 0.8
SNRPD3-201ENST00000215829 IL6STP40189 918 aaPredicted RBP20.08■□□□□ 0.8
SNRPD3-201ENST00000215829 CRKLP46109 303 aaKnown RBP20.08■□□□□ 0.8
SNRPD3-201ENST00000215829 LINS1Q8NG48 757 aa20.08■□□□□ 0.8
SNRPD3-201ENST00000215829 LY75O60449 1722 aa20.07■□□□□ 0.8
SNRPD3-201ENST00000215829 NEXNQ0ZGT2 675 aa20.07■□□□□ 0.8
SNRPD3-201ENST00000215829 KDM2BQ8NHM5 1336 aa20.07■□□□□ 0.8
SNRPD3-201ENST00000215829 COL5A3P25940 1745 aaPredicted RBP20.06■□□□□ 0.8
SNRPD3-201ENST00000215829 GNAI3P08754 354 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms